RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 CCND1P24385 295 aa16.97■□□□□ 0.31
PTCH1-201ENST00000331920 TSNQ15631 228 aaKnown RBP16.97■□□□□ 0.31
PTCH1-201ENST00000331920 CYP4A22Q5TCH4 519 aa16.97■□□□□ 0.31
PTCH1-201ENST00000331920 ACSF2Q96CM8 615 aaPredicted RBP16.97■□□□□ 0.31
PTCH1-201ENST00000331920 HIC2Q96JB3 615 aa16.97■□□□□ 0.31
PTCH1-201ENST00000331920 KCTD14Q9BQ13 255 aaPredicted RBP16.97■□□□□ 0.31
PTCH1-201ENST00000331920 PRRG3Q9BZD7 231 aa16.97■□□□□ 0.31
PTCH1-201ENST00000331920 FAM220BPB1ANY3 271 aa16.97■□□□□ 0.31
PTCH1-201ENST00000331920 MYL12AP19105 171 aa16.97■□□□□ 0.31
PTCH1-201ENST00000331920 GOLPH3Q9H4A6 298 aa16.97■□□□□ 0.31
PTCH1-201ENST00000331920 TBC1D22BQ9NU19 505 aa16.97■□□□□ 0.31
PTCH1-201ENST00000331920 TRPC5OSA6NMA1 111 aa16.97■□□□□ 0.31
PTCH1-201ENST00000331920 WARSP23381 471 aaKnown RBP16.97■□□□□ 0.31
PTCH1-201ENST00000331920 IL13P35225 146 aa16.97■□□□□ 0.31
PTCH1-201ENST00000331920 SERPINB9P50453 376 aa16.97■□□□□ 0.31
PTCH1-201ENST00000331920 VAC14Q08AM6 782 aa16.97■□□□□ 0.31
PTCH1-201ENST00000331920 OVGP1Q12889 678 aa16.97■□□□□ 0.31
PTCH1-201ENST00000331920 GRIK3Q13003 919 aa16.97■□□□□ 0.31
PTCH1-201ENST00000331920 TMEM79Q9BSE2 394 aa16.97■□□□□ 0.31
PTCH1-201ENST00000331920 ZNF222Q9UK12 451 aa16.97■□□□□ 0.31
PTCH1-201ENST00000331920 USP17L10C9JJH3 530 aa16.97■□□□□ 0.31
PTCH1-201ENST00000331920 SMIM22K7EJ46 135 aa16.97■□□□□ 0.31
PTCH1-201ENST00000331920 SH3BP4Q9P0V3 963 aa16.97■□□□□ 0.31
PTCH1-201ENST00000331920 KIF21AQ7Z4S6 1674 aa16.97■□□□□ 0.31
PTCH1-201ENST00000331920 PSMD11O00231 422 aa16.97■□□□□ 0.31
PTCH1-201ENST00000331920 TNFRSF21O75509 655 aa16.97■□□□□ 0.31
PTCH1-201ENST00000331920 NFYCQ13952 458 aa16.97■□□□□ 0.31
PTCH1-201ENST00000331920 CNPY4Q8N129 248 aa16.97■□□□□ 0.31
PTCH1-201ENST00000331920 RNF146Q9NTX7 359 aa16.97■□□□□ 0.31
PTCH1-201ENST00000331920 SYNJ1O43426 1573 aa16.97■□□□□ 0.31
PTCH1-201ENST00000331920 MRC2Q9UBG0 1479 aa16.97■□□□□ 0.31
PTCH1-201ENST00000331920 ATG7O95352 703 aa16.97■□□□□ 0.31
PTCH1-201ENST00000331920 CRYMQ14894 314 aa16.97■□□□□ 0.31
PTCH1-201ENST00000331920 TTC23Q5W5X9 447 aa16.97■□□□□ 0.31
PTCH1-201ENST00000331920 MTSS1LQ765P7 747 aa16.97■□□□□ 0.31
PTCH1-201ENST00000331920 FAM71DQ8N9W8 422 aa16.97■□□□□ 0.31
PTCH1-201ENST00000331920 TMEM143Q96AN5 459 aa16.97■□□□□ 0.31
PTCH1-201ENST00000331920 PLB1Q6P1J6 1458 aa16.97■□□□□ 0.31
PTCH1-201ENST00000331920 ZBTB22O15209 634 aa16.96■□□□□ 0.31
PTCH1-201ENST00000331920 DNAJC3Q13217 504 aa16.96■□□□□ 0.31
PTCH1-201ENST00000331920 KATNAL1Q9BW62 490 aa16.96■□□□□ 0.31
PTCH1-201ENST00000331920 PHF2O75151 1096 aa16.96■□□□□ 0.31
PTCH1-201ENST00000331920 VPS26AO75436 327 aa16.96■□□□□ 0.31
PTCH1-201ENST00000331920 RCVRNP35243 200 aa16.96■□□□□ 0.31
PTCH1-201ENST00000331920 VHLP40337 213 aa16.96■□□□□ 0.31
PTCH1-201ENST00000331920 FGD3Q5JSP0 725 aa16.96■□□□□ 0.31
PTCH1-201ENST00000331920 PALB2Q86YC2 1186 aa16.96■□□□□ 0.31
PTCH1-201ENST00000331920 CARNMT1Q8N4J0 409 aa16.96■□□□□ 0.31
PTCH1-201ENST00000331920 DNAJC1Q96KC8 554 aaKnown RBP16.96■□□□□ 0.31
PTCH1-201ENST00000331920 EFR3BQ9Y2G0 817 aa16.96■□□□□ 0.31
PTCH1-201ENST00000331920 TRIM49D1C9J1S8 452 aa16.96■□□□□ 0.31
PTCH1-201ENST00000331920 SASH1O94885 1247 aa16.96■□□□□ 0.31
PTCH1-201ENST00000331920 VAV1P15498 845 aa16.96■□□□□ 0.31
PTCH1-201ENST00000331920 GOLGA7BQ2TAP0 167 aa16.96■□□□□ 0.31
PTCH1-201ENST00000331920 NOL9Q5SY16 702 aaKnown RBP16.96■□□□□ 0.31
PTCH1-201ENST00000331920 SLC4A9Q96Q91 983 aa16.96■□□□□ 0.31
PTCH1-201ENST00000331920 COMMD9Q9P000 198 aa16.96■□□□□ 0.31
PTCH1-201ENST00000331920 GRID1Q9ULK0 1009 aa16.96■□□□□ 0.31
PTCH1-201ENST00000331920 EFCAB10A6NFE3 127 aa16.96■□□□□ 0.31
PTCH1-201ENST00000331920 AKR1D1P51857 326 aa16.96■□□□□ 0.31
PTCH1-201ENST00000331920 TTLL9Q3SXZ7 439 aa16.96■□□□□ 0.31
PTCH1-201ENST00000331920 CASP12Q6UXS9 341 aa16.96■□□□□ 0.31
PTCH1-201ENST00000331920 RFFLQ8WZ73 363 aa16.96■□□□□ 0.31
PTCH1-201ENST00000331920 FIG4Q92562 907 aa16.96■□□□□ 0.31
PTCH1-201ENST00000331920 STK33Q9BYT3 514 aa16.96■□□□□ 0.31
PTCH1-201ENST00000331920 OSBPL8Q9BZF1 889 aa16.96■□□□□ 0.31
PTCH1-201ENST00000331920 TUBGCP4Q9UGJ1 667 aa16.96■□□□□ 0.31
PTCH1-201ENST00000331920 LYVE1Q9Y5Y7 322 aa16.96■□□□□ 0.31
PTCH1-201ENST00000331920 PRKCBP05771 671 aa16.96■□□□□ 0.31
PTCH1-201ENST00000331920 CYP24A1Q07973 514 aa16.96■□□□□ 0.31
PTCH1-201ENST00000331920 RPTNQ6XPR3 784 aa16.96■□□□□ 0.31
PTCH1-201ENST00000331920 TFB1MQ8WVM0 346 aaKnown RBP16.96■□□□□ 0.31
PTCH1-201ENST00000331920 E2F7Q96AV8 911 aa16.96■□□□□ 0.31
PTCH1-201ENST00000331920 ZNF669Q96BR6 464 aaPredicted RBP16.96■□□□□ 0.31
PTCH1-201ENST00000331920 PRKD2Q9BZL6 878 aa16.96■□□□□ 0.31
PTCH1-201ENST00000331920 ARMC7Q9H6L4 198 aa16.96■□□□□ 0.31
PTCH1-201ENST00000331920 RPRD2Q5VT52 1461 aaKnown RBP16.96■□□□□ 0.31
PTCH1-201ENST00000331920 TGM2P21980 687 aa16.96■□□□□ 0.3
PTCH1-201ENST00000331920 MCCD1P59942 119 aaPredicted RBP16.96■□□□□ 0.3
PTCH1-201ENST00000331920 AGAP9Q5VTM2 703 aa16.96■□□□□ 0.3
PTCH1-201ENST00000331920 SEPHS2Q99611 448 aa16.96■□□□□ 0.3
PTCH1-201ENST00000331920 CHST12Q9NRB3 414 aa16.96■□□□□ 0.3
PTCH1-201ENST00000331920 CHL1O00533 1208 aa16.95■□□□□ 0.3
PTCH1-201ENST00000331920 TBX3O15119 743 aa16.95■□□□□ 0.3
PTCH1-201ENST00000331920 ATMINO43313 823 aaPredicted RBP16.95■□□□□ 0.3
PTCH1-201ENST00000331920 SNUPNO95149 360 aaKnown RBP16.95■□□□□ 0.3
PTCH1-201ENST00000331920 CRKP46108 304 aa16.95■□□□□ 0.3
PTCH1-201ENST00000331920 HSPA13P48723 471 aa16.95■□□□□ 0.3
PTCH1-201ENST00000331920 ARHGDIBP52566 201 aa16.95■□□□□ 0.3
PTCH1-201ENST00000331920 BYSLQ13895 437 aaKnown RBP16.95■□□□□ 0.3
PTCH1-201ENST00000331920 WDR60Q8WVS4 1066 aa16.95■□□□□ 0.3
PTCH1-201ENST00000331920 TMEM120BA0PK00 339 aa16.95■□□□□ 0.3
PTCH1-201ENST00000331920 TDRD3Q9H7E2 651 aaKnown RBP16.95■□□□□ 0.3
PTCH1-201ENST00000331920 PCDH8O95206 1070 aa16.95■□□□□ 0.3
PTCH1-201ENST00000331920 CYP2D6P10635 497 aa16.95■□□□□ 0.3
PTCH1-201ENST00000331920 ARL3P36405 182 aa16.95■□□□□ 0.3
PTCH1-201ENST00000331920 USP7Q93009 1102 aa16.95■□□□□ 0.3
PTCH1-201ENST00000331920 QKIQ96PU8 341 aaKnown RBP eCLIP16.95■□□□□ 0.32e-7■■■■■ 29
PTCH1-201ENST00000331920 CD248Q9HCU0 757 aa16.95■□□□□ 0.3
PTCH1-201ENST00000331920 FAM135BQ49AJ0 1406 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 216 ms