RNA–Protein interactions for RNA: ENST00000321805.11

UBE2D3-201, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-201ENST00000321805 SCARA5Q6ZMJ2 495 aa22.67■■□□□ 1.22
UBE2D3-201ENST00000321805 SMARCE1Q969G3 411 aa22.67■■□□□ 1.22
UBE2D3-201ENST00000321805 FAM83CQ9BQN1 747 aa22.67■■□□□ 1.22
UBE2D3-201ENST00000321805 B3GNT5Q9BYG0 378 aa22.67■■□□□ 1.22
UBE2D3-201ENST00000321805 ZNF518BQ9C0D4 1074 aa22.67■■□□□ 1.22
UBE2D3-201ENST00000321805 SMG9Q9H0W8 520 aaKnown RBP22.67■■□□□ 1.22
UBE2D3-201ENST00000321805 TMEM8AQ9HCN3 771 aa22.67■■□□□ 1.22
UBE2D3-201ENST00000321805 TRPM5Q9NZQ8 1165 aa22.67■■□□□ 1.22
UBE2D3-201ENST00000321805 CCL26Q9Y258 94 aa22.67■■□□□ 1.22
UBE2D3-201ENST00000321805 PRR23AA6NEV1 266 aa22.66■■□□□ 1.22
UBE2D3-201ENST00000321805 STX10O60499 249 aa22.66■■□□□ 1.22
UBE2D3-201ENST00000321805 CKMP06732 381 aa22.66■■□□□ 1.22
UBE2D3-201ENST00000321805 EPB41P11171 864 aaKnown RBP22.66■■□□□ 1.22
UBE2D3-201ENST00000321805 ASPAP45381 313 aa22.66■■□□□ 1.22
UBE2D3-201ENST00000321805 CDH8P55286 799 aa22.66■■□□□ 1.22
UBE2D3-201ENST00000321805 CC2D1AQ6P1N0 951 aaPredicted RBP22.66■■□□□ 1.22
UBE2D3-201ENST00000321805 SMYD4Q8IYR2 804 aaPredicted RBP22.66■■□□□ 1.22
UBE2D3-201ENST00000321805 MAML2Q8IZL2 1156 aaPredicted RBP22.66■■□□□ 1.22
UBE2D3-201ENST00000321805 CCDC150Q8NCX0 1101 aa22.66■■□□□ 1.22
UBE2D3-201ENST00000321805 SMARCD1Q96GM5 515 aa22.66■■□□□ 1.22
UBE2D3-201ENST00000321805 FAXDC2Q96IV6 333 aa22.66■■□□□ 1.22
UBE2D3-201ENST00000321805 ZFYVE19Q96K21 471 aa22.66■■□□□ 1.22
UBE2D3-201ENST00000321805 TSG101Q99816 390 aa22.66■■□□□ 1.22
UBE2D3-201ENST00000321805 TRPC7Q9HCX4 862 aa22.66■■□□□ 1.22
UBE2D3-201ENST00000321805 PRMT8Q9NR22 394 aaPredicted RBP22.66■■□□□ 1.22
UBE2D3-201ENST00000321805 GTSE1Q9NYZ3 720 aa22.66■■□□□ 1.22
UBE2D3-201ENST00000321805 GCNT4Q9P109 453 aa22.66■■□□□ 1.22
UBE2D3-201ENST00000321805 HELZP42694 1942 aaKnown RBP22.65■■□□□ 1.22
UBE2D3-201ENST00000321805 RTN3O95197 1032 aaPredicted RBP22.65■■□□□ 1.22
UBE2D3-201ENST00000321805 TRIM49P0CI25 452 aa22.65■■□□□ 1.22
UBE2D3-201ENST00000321805 TRIM49CP0CI26 452 aa22.65■■□□□ 1.22
UBE2D3-201ENST00000321805 CHRNB1P11230 501 aa22.65■■□□□ 1.22
UBE2D3-201ENST00000321805 PPP1R2P41236 205 aa22.65■■□□□ 1.22
UBE2D3-201ENST00000321805 PRCPP42785 496 aa22.65■■□□□ 1.22
UBE2D3-201ENST00000321805 RAP1GAPP47736 663 aa22.65■■□□□ 1.22
UBE2D3-201ENST00000321805 GCLMP48507 274 aa22.65■■□□□ 1.22
UBE2D3-201ENST00000321805 PPP3CAQ08209 521 aa22.65■■□□□ 1.22
UBE2D3-201ENST00000321805 INCA1Q0VD86 236 aa22.65■■□□□ 1.22
UBE2D3-201ENST00000321805 USP4Q13107 963 aa22.65■■□□□ 1.22
UBE2D3-201ENST00000321805 PDGFRLQ15198 375 aa22.65■■□□□ 1.22
UBE2D3-201ENST00000321805 DGKKQ5KSL6 1271 aa22.65■■□□□ 1.22
UBE2D3-201ENST00000321805 KRT39Q6A163 491 aa22.65■■□□□ 1.22
UBE2D3-201ENST00000321805 FAM35AQ86V20 835 aa22.65■■□□□ 1.22
UBE2D3-201ENST00000321805 CRYBG2Q8N1P7 616 aa22.65■■□□□ 1.22
UBE2D3-201ENST00000321805 KIAA1958Q8N8K9 716 aa22.65■■□□□ 1.22
UBE2D3-201ENST00000321805 SLITRK1Q96PX8 696 aa22.65■■□□□ 1.22
UBE2D3-201ENST00000321805 SDCBP2Q9H190 292 aa22.65■■□□□ 1.22
UBE2D3-201ENST00000321805 CYP3A43Q9HB55 503 aa22.65■■□□□ 1.22
UBE2D3-201ENST00000321805 GKN1Q9NS71 199 aa22.65■■□□□ 1.22
UBE2D3-201ENST00000321805 ARHGAP26Q9UNA1 814 aa22.65■■□□□ 1.22
UBE2D3-201ENST00000321805 PCDHA5Q9Y5H7 936 aa22.65■■□□□ 1.22
UBE2D3-201ENST00000321805 RIF1Q5UIP0 2472 aaKnown RBP22.64■■□□□ 1.21
UBE2D3-201ENST00000321805 SLC16A3O15427 465 aaKnown RBP22.64■■□□□ 1.21
UBE2D3-201ENST00000321805 USP46P62068 366 aa22.64■■□□□ 1.21
UBE2D3-201ENST00000321805 AMPD2Q01433 879 aa22.64■■□□□ 1.21
UBE2D3-201ENST00000321805 LRRC63Q05C16 580 aa22.64■■□□□ 1.21
UBE2D3-201ENST00000321805 RUNX3Q13761 415 aa22.64■■□□□ 1.21
UBE2D3-201ENST00000321805 PPP2R5DQ14738 602 aa22.64■■□□□ 1.21
UBE2D3-201ENST00000321805 MTF1Q14872 753 aa22.64■■□□□ 1.21
UBE2D3-201ENST00000321805 ZNF77Q15935 545 aa22.64■■□□□ 1.21
UBE2D3-201ENST00000321805 ZC3H3Q8IXZ2 948 aaKnown RBP22.64■■□□□ 1.21
UBE2D3-201ENST00000321805 NUP93Q8N1F7 819 aa22.64■■□□□ 1.21
UBE2D3-201ENST00000321805 PDZD8Q8NEN9 1154 aa22.64■■□□□ 1.21
UBE2D3-201ENST00000321805 OVCA2Q8WZ82 227 aa22.64■■□□□ 1.21
UBE2D3-201ENST00000321805 FAM126AQ9BYI3 521 aaPredicted RBP22.64■■□□□ 1.21
UBE2D3-201ENST00000321805 DNAI2Q9GZS0 605 aa22.64■■□□□ 1.21
UBE2D3-201ENST00000321805 NIF3L1Q9GZT8 377 aa22.64■■□□□ 1.21
UBE2D3-201ENST00000321805 LMAN1LQ9HAT1 526 aa22.64■■□□□ 1.21
UBE2D3-201ENST00000321805 DMAP1Q9NPF5 467 aaPredicted RBP22.64■■□□□ 1.21
UBE2D3-201ENST00000321805 COMMD8Q9NX08 183 aa22.64■■□□□ 1.21
UBE2D3-201ENST00000321805 FAM186AA6NE01 2351 aa22.64■■□□□ 1.21
UBE2D3-201ENST00000321805 DMDP11532 3685 aa22.63■■□□□ 1.21
UBE2D3-201ENST00000321805 CLDN5O00501 218 aa22.63■■□□□ 1.21
UBE2D3-201ENST00000321805 KINO60870 393 aaKnown RBP22.63■■□□□ 1.21
UBE2D3-201ENST00000321805 HDCP19113 662 aa22.63■■□□□ 1.21
UBE2D3-201ENST00000321805 MXI1P50539 228 aa22.63■■□□□ 1.21
UBE2D3-201ENST00000321805 NDST1P52848 882 aa22.63■■□□□ 1.21
UBE2D3-201ENST00000321805 CACNA2D1P54289 1103 aa22.63■■□□□ 1.21
UBE2D3-201ENST00000321805 FKBP3Q00688 224 aaKnown RBP22.63■■□□□ 1.21
UBE2D3-201ENST00000321805 TNK2Q07912 1038 aa22.63■■□□□ 1.21
UBE2D3-201ENST00000321805 MTAPQ13126 283 aa22.63■■□□□ 1.21
UBE2D3-201ENST00000321805 STIM1Q13586 685 aa22.63■■□□□ 1.21
UBE2D3-201ENST00000321805 ASCL5Q7RTU5 278 aa22.63■■□□□ 1.21
UBE2D3-201ENST00000321805 SYNPOQ8N3V7 929 aa22.63■■□□□ 1.21
UBE2D3-201ENST00000321805 TTC39CQ8N584 583 aa22.63■■□□□ 1.21
UBE2D3-201ENST00000321805 TAS1R2Q8TE23 839 aa22.63■■□□□ 1.21
UBE2D3-201ENST00000321805 MED10Q9BTT4 135 aa22.63■■□□□ 1.21
UBE2D3-201ENST00000321805 FAM124BQ9H5Z6 455 aaPredicted RBP22.63■■□□□ 1.21
UBE2D3-201ENST00000321805 TMEM30AQ9NV96 361 aa22.63■■□□□ 1.21
UBE2D3-201ENST00000321805 PCDHGA2Q9Y5H1 932 aa22.63■■□□□ 1.21
UBE2D3-201ENST00000321805 C2orf78A6NCI8 922 aa22.62■■□□□ 1.21
UBE2D3-201ENST00000321805 ZNF840PA6NDX5 716 aa22.62■■□□□ 1.21
UBE2D3-201ENST00000321805 OLFM2O95897 454 aa22.62■■□□□ 1.21
UBE2D3-201ENST00000321805 SOX9P48436 509 aa22.62■■□□□ 1.21
UBE2D3-201ENST00000321805 CCR3P51677 355 aa22.62■■□□□ 1.21
UBE2D3-201ENST00000321805 SPOPLQ6IQ16 392 aa22.62■■□□□ 1.21
UBE2D3-201ENST00000321805 TXNDC11Q6PKC3 985 aa22.62■■□□□ 1.21
UBE2D3-201ENST00000321805 PAQR9Q6ZVX9 377 aa22.62■■□□□ 1.21
UBE2D3-201ENST00000321805 ACOT1Q86TX2 421 aa22.62■■□□□ 1.21
UBE2D3-201ENST00000321805 FUKQ8N0W3 1084 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms