RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 SPOCD1Q6ZMY3 1216 aa17.08■□□□□ 0.32
SFXN1-201ENST00000321442 COPS5Q92905 334 aa17.08■□□□□ 0.32
SFXN1-201ENST00000321442 SYT17Q9BSW7 474 aa17.08■□□□□ 0.32
SFXN1-201ENST00000321442 DRC3Q9H069 523 aa17.08■□□□□ 0.32
SFXN1-201ENST00000321442 IGSF9BQ9UPX0 1349 aa17.07■□□□□ 0.32
SFXN1-201ENST00000321442 SH3BP5O60239 455 aa17.07■□□□□ 0.32
SFXN1-201ENST00000321442 DRG2P55039 364 aaKnown RBP17.07■□□□□ 0.32
SFXN1-201ENST00000321442 FOXD4Q12950 439 aaPredicted RBP17.07■□□□□ 0.32
SFXN1-201ENST00000321442 PGM5Q15124 567 aa17.07■□□□□ 0.32
SFXN1-201ENST00000321442 IFNEQ86WN2 208 aa17.07■□□□□ 0.32
SFXN1-201ENST00000321442 ZNF677Q86XU0 584 aa17.07■□□□□ 0.32
SFXN1-201ENST00000321442 CDKL3Q8IVW4 592 aaPredicted RBP17.07■□□□□ 0.32
SFXN1-201ENST00000321442 SPOCK2Q92563 424 aa17.07■□□□□ 0.32
SFXN1-201ENST00000321442 KCNK16Q96T55 309 aa17.07■□□□□ 0.32
SFXN1-201ENST00000321442 WDR18Q9BV38 432 aa17.07■□□□□ 0.32
SFXN1-201ENST00000321442 GPATCH2LQ9NWQ4 482 aa17.07■□□□□ 0.32
SFXN1-201ENST00000321442 BANF1O75531 89 aa17.07■□□□□ 0.32
SFXN1-201ENST00000321442 SRGAP2BP0DMP2 458 aa17.07■□□□□ 0.32
SFXN1-201ENST00000321442 RARBP10826 455 aa17.07■□□□□ 0.32
SFXN1-201ENST00000321442 LCP1P13796 627 aa17.07■□□□□ 0.32
SFXN1-201ENST00000321442 ELK3P41970 407 aa17.07■□□□□ 0.32
SFXN1-201ENST00000321442 TTC39BQ5VTQ0 682 aaPredicted RBP17.07■□□□□ 0.32
SFXN1-201ENST00000321442 FITM2Q8N6M3 262 aa17.07■□□□□ 0.32
SFXN1-201ENST00000321442 TTC8Q8TAM2 541 aa17.07■□□□□ 0.32
SFXN1-201ENST00000321442 ETNPPLQ8TBG4 499 aa17.07■□□□□ 0.32
SFXN1-201ENST00000321442 PARD3BQ8TEW8 1205 aa17.07■□□□□ 0.32
SFXN1-201ENST00000321442 ASCC2Q9H1I8 757 aaPredicted RBP17.07■□□□□ 0.32
SFXN1-201ENST00000321442 GRID1Q9ULK0 1009 aa17.07■□□□□ 0.32
SFXN1-201ENST00000321442 GOLGA4Q13439 2230 aaKnown RBP17.07■□□□□ 0.32
SFXN1-201ENST00000321442 DNALI1O14645 258 aaPredicted RBP17.07■□□□□ 0.32
SFXN1-201ENST00000321442 GRIN3BO60391 1043 aa17.07■□□□□ 0.32
SFXN1-201ENST00000321442 EEF1DP29692 281 aaKnown RBP17.07■□□□□ 0.32
SFXN1-201ENST00000321442 SLC35G1Q2M3R5 365 aa17.07■□□□□ 0.32
SFXN1-201ENST00000321442 SGSM1Q2NKQ1 1148 aa17.07■□□□□ 0.32
SFXN1-201ENST00000321442 GLRA4Q5JXX5 417 aa17.07■□□□□ 0.32
SFXN1-201ENST00000321442 LRRC8EQ6NSJ5 796 aa17.07■□□□□ 0.32
SFXN1-201ENST00000321442 CMTM5Q96DZ9 223 aa17.07■□□□□ 0.32
SFXN1-201ENST00000321442 BTBD10Q9BSF8 475 aa17.07■□□□□ 0.32
SFXN1-201ENST00000321442 C20orf96Q9NUD7 363 aaPredicted RBP17.07■□□□□ 0.32
SFXN1-201ENST00000321442 PAK5Q9P286 719 aa17.07■□□□□ 0.32
SFXN1-201ENST00000321442 EXTL3O43909 919 aa17.07■□□□□ 0.32
SFXN1-201ENST00000321442 KLHL2O95198 593 aa17.07■□□□□ 0.32
SFXN1-201ENST00000321442 PRKCBP05771 671 aa17.07■□□□□ 0.32
SFXN1-201ENST00000321442 NLRP11P59045 1033 aaKnown RBP17.07■□□□□ 0.32
SFXN1-201ENST00000321442 EFCAB12Q6NXP0 572 aa17.07■□□□□ 0.32
SFXN1-201ENST00000321442 ZCCHC23Q6ZST2 131 aa17.07■□□□□ 0.32
SFXN1-201ENST00000321442 RSAD1Q9HA92 442 aa17.07■□□□□ 0.32
SFXN1-201ENST00000321442 ITGB5P18084 799 aa17.06■□□□□ 0.32
SFXN1-201ENST00000321442 SLC34A1Q06495 639 aa17.06■□□□□ 0.32
SFXN1-201ENST00000321442 IL31Q6EBC2 164 aa17.06■□□□□ 0.32
SFXN1-201ENST00000321442 LRRC74BQ6ZQY2 392 aa17.06■□□□□ 0.32
SFXN1-201ENST00000321442 C1orf186Q6ZWK4 172 aa17.06■□□□□ 0.32
SFXN1-201ENST00000321442 LRRC57Q8N9N7 239 aa17.06■□□□□ 0.32
SFXN1-201ENST00000321442 VPS39Q96JC1 886 aa17.06■□□□□ 0.32
SFXN1-201ENST00000321442 CNBD2Q96M20 576 aa17.06■□□□□ 0.32
SFXN1-201ENST00000321442 KCNMB3Q9NPA1 279 aa17.06■□□□□ 0.32
SFXN1-201ENST00000321442 SLC12A6Q9UHW9 1150 aa17.06■□□□□ 0.32
SFXN1-201ENST00000321442 SLC24A2Q9UI40 661 aa17.06■□□□□ 0.32
SFXN1-201ENST00000321442 ATRNO75882 1429 aa17.06■□□□□ 0.32
SFXN1-201ENST00000321442 MYH2Q9UKX2 1941 aa17.06■□□□□ 0.32
SFXN1-201ENST00000321442 LGR5O75473 907 aa17.06■□□□□ 0.32
SFXN1-201ENST00000321442 C16orf87Q6PH81 154 aa17.06■□□□□ 0.32
SFXN1-201ENST00000321442 MTMR12Q9C0I1 747 aa17.06■□□□□ 0.32
SFXN1-201ENST00000321442 NIF3L1Q9GZT8 377 aa17.06■□□□□ 0.32
SFXN1-201ENST00000321442 CYP39A1Q9NYL5 469 aa17.06■□□□□ 0.32
SFXN1-201ENST00000321442 LZTS1Q9Y250 596 aa17.06■□□□□ 0.32
SFXN1-201ENST00000321442 SNX9Q9Y5X1 595 aa17.06■□□□□ 0.32
SFXN1-201ENST00000321442 PRRC2BQ5JSZ5 2229 aaKnown RBP17.06■□□□□ 0.32
SFXN1-201ENST00000321442 A8MXQ7 604 aa17.06■□□□□ 0.32
SFXN1-201ENST00000321442 F8VP50 259 aa17.06■□□□□ 0.32
SFXN1-201ENST00000321442 KRT36O76013 467 aa17.06■□□□□ 0.32
SFXN1-201ENST00000321442 FGRP09769 529 aa17.06■□□□□ 0.32
SFXN1-201ENST00000321442 RPL10AP62906 217 aaKnown RBP17.06■□□□□ 0.32
SFXN1-201ENST00000321442 SGF29Q96ES7 293 aa17.06■□□□□ 0.32
SFXN1-201ENST00000321442 ING2Q9H160 280 aa17.06■□□□□ 0.32
SFXN1-201ENST00000321442 BCAS3Q9H6U6 928 aa17.06■□□□□ 0.32
SFXN1-201ENST00000321442 GPBP1L1Q9HC44 474 aaPredicted RBP17.06■□□□□ 0.32
SFXN1-201ENST00000321442 PIH1D1Q9NWS0 290 aaKnown RBP17.06■□□□□ 0.32
SFXN1-201ENST00000321442 DNAJC16Q9Y2G8 782 aa17.06■□□□□ 0.32
SFXN1-201ENST00000321442 C2CD2Q9Y426 696 aa17.06■□□□□ 0.32
SFXN1-201ENST00000321442 MEI4A8MW99 385 aa17.05■□□□□ 0.32
SFXN1-201ENST00000321442 TPST1O60507 370 aa17.05■□□□□ 0.32
SFXN1-201ENST00000321442 RASSF9O75901 435 aa17.05■□□□□ 0.32
SFXN1-201ENST00000321442 ZNF286BP0CG31 522 aa17.05■□□□□ 0.32
SFXN1-201ENST00000321442 DSG3P32926 999 aa17.05■□□□□ 0.32
SFXN1-201ENST00000321442 PEX5P50542 639 aa17.05■□□□□ 0.32
SFXN1-201ENST00000321442 NUDT2P50583 147 aa17.05■□□□□ 0.32
SFXN1-201ENST00000321442 LAMB3Q13751 1172 aa17.05■□□□□ 0.32
SFXN1-201ENST00000321442 EFTUD2Q15029 972 aaKnown RBP eCLIP17.05■□□□□ 0.322e-8■■■■□ 24
SFXN1-201ENST00000321442 GNASQ5JWF2 1037 aa17.05■□□□□ 0.32
SFXN1-201ENST00000321442 WASHC2DQ5SRD0 308 aa17.05■□□□□ 0.32
SFXN1-201ENST00000321442 GRAMD4Q6IC98 578 aa17.05■□□□□ 0.32
SFXN1-201ENST00000321442 FAM193BQ96PV7 902 aaPredicted RBP17.05■□□□□ 0.32
SFXN1-201ENST00000321442 TIPINQ9BVW5 301 aa17.05■□□□□ 0.32
SFXN1-201ENST00000321442 SIK2Q9H0K1 926 aa17.05■□□□□ 0.32
SFXN1-201ENST00000321442 CAAP1Q9H8G2 361 aa17.05■□□□□ 0.32
SFXN1-201ENST00000321442 GBA2Q9HCG7 927 aaPredicted RBP17.05■□□□□ 0.32
SFXN1-201ENST00000321442 VTNP04004 478 aa17.05■□□□□ 0.32
SFXN1-201ENST00000321442 SPATA31C1P0DKV0 1188 aa17.05■□□□□ 0.32
SFXN1-201ENST00000321442 ABI1Q8IZP0 508 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms