RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 CCNYL1Q8N7R7 359 aa17.28■□□□□ 0.36
PACS1-201ENST00000320580 FGFBP2Q9BYJ0 223 aa17.28■□□□□ 0.36
PACS1-201ENST00000320580 MRPL40Q9NQ50 206 aaKnown RBP17.28■□□□□ 0.36
PACS1-201ENST00000320580 KPNA7A9QM74 516 aa17.27■□□□□ 0.36
PACS1-201ENST00000320580 MGEA5O60502 916 aa17.27■□□□□ 0.36
PACS1-201ENST00000320580 BCL10O95999 233 aa17.27■□□□□ 0.36
PACS1-201ENST00000320580 LDHAP00338 332 aaKnown RBP17.27■□□□□ 0.36
PACS1-201ENST00000320580 RXRBP28702 533 aa17.27■□□□□ 0.36
PACS1-201ENST00000320580 MAGEA10P43363 369 aaPredicted RBP17.27■□□□□ 0.36
PACS1-201ENST00000320580 ZYXQ15942 572 aaKnown RBP17.27■□□□□ 0.36
PACS1-201ENST00000320580 PACS1Q6VY07 963 aa17.27■□□□□ 0.36
PACS1-201ENST00000320580 ZBTB49Q6ZSB9 765 aa17.27■□□□□ 0.36
PACS1-201ENST00000320580 UTS2BQ765I0 119 aa17.27■□□□□ 0.36
PACS1-201ENST00000320580 MCF2L2Q86YR7 1114 aa17.27■□□□□ 0.36
PACS1-201ENST00000320580 DCUN1D1Q96GG9 259 aa17.27■□□□□ 0.36
PACS1-201ENST00000320580 SEMA6AQ9H2E6 1030 aa17.27■□□□□ 0.36
PACS1-201ENST00000320580 APRTP07741 180 aa17.27■□□□□ 0.36
PACS1-201ENST00000320580 KRT19P08727 400 aa17.27■□□□□ 0.36
PACS1-201ENST00000320580 RPL10AP62906 217 aaKnown RBP17.27■□□□□ 0.36
PACS1-201ENST00000320580 RTKN2Q8IZC4 609 aa17.27■□□□□ 0.36
PACS1-201ENST00000320580 CCDC33Q8N5R6 958 aa17.27■□□□□ 0.36
PACS1-201ENST00000320580 FBXL13Q8NEE6 735 aa17.27■□□□□ 0.36
PACS1-201ENST00000320580 ZNF577Q9BSK1 485 aa17.27■□□□□ 0.36
PACS1-201ENST00000320580 BRD8Q9H0E9 1235 aa17.27■□□□□ 0.36
PACS1-201ENST00000320580 ACP6Q9NPH0 428 aa17.27■□□□□ 0.36
PACS1-201ENST00000320580 STXBP5LQ9Y2K9 1186 aa17.27■□□□□ 0.36
PACS1-201ENST00000320580 SMAPO00193 183 aa17.27■□□□□ 0.35
PACS1-201ENST00000320580 ZBTB5O15062 677 aa17.27■□□□□ 0.35
PACS1-201ENST00000320580 PRPF4O43172 522 aaKnown RBP eCLIP17.27■□□□□ 0.35
PACS1-201ENST00000320580 DCXO43602 365 aa17.27■□□□□ 0.35
PACS1-201ENST00000320580 ETS1P14921 441 aa17.27■□□□□ 0.35
PACS1-201ENST00000320580 XIAPP98170 497 aa17.27■□□□□ 0.35
PACS1-201ENST00000320580 DMP1Q13316 513 aaPredicted RBP17.27■□□□□ 0.35
PACS1-201ENST00000320580 COBLL1Q53SF7 1204 aa17.27■□□□□ 0.35
PACS1-201ENST00000320580 CMPK2Q5EBM0 449 aa17.27■□□□□ 0.35
PACS1-201ENST00000320580 NSUN4Q96CB9 384 aaKnown RBP17.27■□□□□ 0.35
PACS1-201ENST00000320580 DNAJC19Q96DA6 116 aa17.27■□□□□ 0.35
PACS1-201ENST00000320580 SPDYE16A6NNV3 312 aaPredicted RBP17.26■□□□□ 0.35
PACS1-201ENST00000320580 SYCE1LA8MT33 242 aa17.26■□□□□ 0.35
PACS1-201ENST00000320580 EFTUD2Q15029 972 aaKnown RBP eCLIP17.26■□□□□ 0.354e-8■■■■■ 38.6
PACS1-201ENST00000320580 MAPK11Q15759 364 aa17.26■□□□□ 0.35
PACS1-201ENST00000320580 NEDD8Q15843 81 aa17.26■□□□□ 0.35
PACS1-201ENST00000320580 ERFEQ4G0M1 354 aa17.26■□□□□ 0.35
PACS1-201ENST00000320580 EGFLAMQ63HQ2 1017 aa17.26■□□□□ 0.35
PACS1-201ENST00000320580 AGPAT3Q9NRZ7 376 aa17.26■□□□□ 0.35
PACS1-201ENST00000320580 SEL1LQ9UBV2 794 aa17.26■□□□□ 0.35
PACS1-201ENST00000320580 SLC7A8Q9UHI5 535 aa17.26■□□□□ 0.35
PACS1-201ENST00000320580 LGALS13Q9UHV8 139 aa17.26■□□□□ 0.35
PACS1-201ENST00000320580 CLEC11AQ9Y240 323 aa17.26■□□□□ 0.35
PACS1-201ENST00000320580 MYH7BA7E2Y1 1941 aa17.26■□□□□ 0.35
PACS1-201ENST00000320580 ZNF839A8K0R7 811 aa17.26■□□□□ 0.35
PACS1-201ENST00000320580 CST8O60676 142 aa17.26■□□□□ 0.35
PACS1-201ENST00000320580 EIF4BP23588 611 aaKnown RBP17.26■□□□□ 0.35
PACS1-201ENST00000320580 CASP2P42575 452 aa17.26■□□□□ 0.35
PACS1-201ENST00000320580 KRT72Q14CN4 511 aa17.26■□□□□ 0.35
PACS1-201ENST00000320580 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.26■□□□□ 0.35
PACS1-201ENST00000320580 ZBED2Q9BTP6 218 aa17.26■□□□□ 0.35
PACS1-201ENST00000320580 YIPF2Q9BWQ6 316 aa17.26■□□□□ 0.35
PACS1-201ENST00000320580 NOL6Q9H6R4 1146 aaKnown RBP17.26■□□□□ 0.35
PACS1-201ENST00000320580 DNPEPQ9ULA0 475 aa17.26■□□□□ 0.35
PACS1-201ENST00000320580 GRID1Q9ULK0 1009 aa17.26■□□□□ 0.35
PACS1-201ENST00000320580 COG5Q9UP83 839 aa17.26■□□□□ 0.35
PACS1-201ENST00000320580 ABHD2P08910 425 aa17.26■□□□□ 0.35
PACS1-201ENST00000320580 PABPC4LP0CB38 370 aaKnown RBP17.26■□□□□ 0.35
PACS1-201ENST00000320580 DCAF12L1Q5VU92 463 aa17.26■□□□□ 0.35
PACS1-201ENST00000320580 ADGRF4Q8IZF3 695 aa17.26■□□□□ 0.35
PACS1-201ENST00000320580 BORCS5Q969J3 196 aa17.26■□□□□ 0.35
PACS1-201ENST00000320580 CDRT15Q96T59 188 aa17.26■□□□□ 0.35
PACS1-201ENST00000320580 SPATA31A6Q5VVP1 1343 aa17.26■□□□□ 0.35
PACS1-201ENST00000320580 GNA15P30679 374 aa17.26■□□□□ 0.35
PACS1-201ENST00000320580 PKNOX1P55347 436 aa17.26■□□□□ 0.35
PACS1-201ENST00000320580 ACTR3P61158 418 aa17.26■□□□□ 0.35
PACS1-201ENST00000320580 COG2Q14746 738 aa17.26■□□□□ 0.35
PACS1-201ENST00000320580 LAYNQ6UX15 382 aa17.26■□□□□ 0.35
PACS1-201ENST00000320580 ADCK1Q86TW2 530 aa17.26■□□□□ 0.35
PACS1-201ENST00000320580 FAM71DQ8N9W8 422 aa17.26■□□□□ 0.35
PACS1-201ENST00000320580 NRDE2Q9H7Z3 1164 aa17.26■□□□□ 0.35
PACS1-201ENST00000320580 ZC4H2Q9NQZ6 224 aa17.26■□□□□ 0.35
PACS1-201ENST00000320580 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.25■□□□□ 0.35
PACS1-201ENST00000320580 SLC16A4O15374 487 aa17.25■□□□□ 0.35
PACS1-201ENST00000320580 CCDC159P0C7I6 412 aa17.25■□□□□ 0.35
PACS1-201ENST00000320580 OSBPP22059 807 aa17.25■□□□□ 0.35
PACS1-201ENST00000320580 FGFR3P22607 806 aa17.25■□□□□ 0.35
PACS1-201ENST00000320580 ROR1Q01973 937 aa17.25■□□□□ 0.35
PACS1-201ENST00000320580 KCNA1Q09470 495 aa17.25■□□□□ 0.35
PACS1-201ENST00000320580 ITGA7Q13683 1181 aa17.25■□□□□ 0.35
PACS1-201ENST00000320580 NPY5RQ15761 445 aa17.25■□□□□ 0.35
PACS1-201ENST00000320580 ZNF618Q5T7W0 954 aa17.25■□□□□ 0.35
PACS1-201ENST00000320580 CDR2LQ86X02 465 aaPredicted RBP17.25■□□□□ 0.35
PACS1-201ENST00000320580 ZSCAN18Q8TBC5 510 aaPredicted RBP17.25■□□□□ 0.35
PACS1-201ENST00000320580 RIOK1Q9BRS2 568 aaKnown RBP17.25■□□□□ 0.35
PACS1-201ENST00000320580 GPC6Q9Y625 555 aaPredicted RBP17.25■□□□□ 0.35
PACS1-201ENST00000320580 M0R3G1 203 aa17.25■□□□□ 0.35
PACS1-201ENST00000320580 ECE2O60344 883 aa17.25■□□□□ 0.35
PACS1-201ENST00000320580 CNOT3O75175 753 aaKnown RBP17.25■□□□□ 0.35
PACS1-201ENST00000320580 IL10P22301 178 aa17.25■□□□□ 0.35
PACS1-201ENST00000320580 CBWD6Q4V339 395 aa17.25■□□□□ 0.35
PACS1-201ENST00000320580 CBWD3Q5JTY5 395 aa17.25■□□□□ 0.35
PACS1-201ENST00000320580 CBWD5Q5RIA9 395 aa17.25■□□□□ 0.35
PACS1-201ENST00000320580 UBAP2Q5T6F2 1119 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms