RNA–Protein interactions for RNA: ENST00000315660.8

TSC22D3-201, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 2,213 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-201ENST00000315660 KCNK9Q9NPC2 374 aa16.41■□□□□ 0.22
TSC22D3-201ENST00000315660 PCSK1NQ9UHG2 260 aa16.41■□□□□ 0.22
TSC22D3-201ENST00000315660 USP18Q9UMW8 372 aa16.41■□□□□ 0.22
TSC22D3-201ENST00000315660 CD48P09326 243 aa16.4■□□□□ 0.22
TSC22D3-201ENST00000315660 CREB1P16220 341 aa16.4■□□□□ 0.22
TSC22D3-201ENST00000315660 MIPP30301 263 aa16.4■□□□□ 0.22
TSC22D3-201ENST00000315660 PCK1P35558 622 aa16.4■□□□□ 0.22
TSC22D3-201ENST00000315660 RNASEH2BQ5TBB1 312 aaKnown RBP16.4■□□□□ 0.22
TSC22D3-201ENST00000315660 LCLAT1Q6UWP7 414 aa16.4■□□□□ 0.22
TSC22D3-201ENST00000315660 CENPUQ71F23 418 aa16.4■□□□□ 0.22
TSC22D3-201ENST00000315660 RSAD2Q8WXG1 361 aa16.4■□□□□ 0.22
TSC22D3-201ENST00000315660 ABHD16BQ9H3Z7 469 aa16.4■□□□□ 0.22
TSC22D3-201ENST00000315660 SAE1Q9UBE0 346 aaPredicted RBP16.4■□□□□ 0.22
TSC22D3-201ENST00000315660 TBK1Q9UHD2 729 aa16.4■□□□□ 0.22
TSC22D3-201ENST00000315660 EXOC1LA0A1B0GW35 172 aa16.39■□□□□ 0.22
TSC22D3-201ENST00000315660 RRN3P2A6NIE6 340 aa16.39■□□□□ 0.22
TSC22D3-201ENST00000315660 CCT8L1PA6NM43 557 aa16.39■□□□□ 0.22
TSC22D3-201ENST00000315660 BRAFP15056 766 aa16.39■□□□□ 0.22
TSC22D3-201ENST00000315660 ZNF143P52747 638 aaPredicted RBP16.39■□□□□ 0.22
TSC22D3-201ENST00000315660 CDC42EP1Q00587 391 aa16.39■□□□□ 0.22
TSC22D3-201ENST00000315660 ACVR2BQ13705 512 aa16.39■□□□□ 0.22
TSC22D3-201ENST00000315660 ITIH4Q14624 930 aa16.39■□□□□ 0.22
TSC22D3-201ENST00000315660 KIZQ2M2Z5 673 aa16.39■□□□□ 0.22
TSC22D3-201ENST00000315660 VSTM1Q6UX27 236 aa16.39■□□□□ 0.22
TSC22D3-201ENST00000315660 RFX6Q8HWS3 928 aa16.39■□□□□ 0.22
TSC22D3-201ENST00000315660 CMASQ8NFW8 434 aaPredicted RBP16.39■□□□□ 0.22
TSC22D3-201ENST00000315660 HSPH1Q92598 858 aa16.39■□□□□ 0.22
TSC22D3-201ENST00000315660 TINF2Q9BSI4 451 aa16.39■□□□□ 0.22
TSC22D3-201ENST00000315660 PLEKHA5Q9HAU0 1116 aa16.39■□□□□ 0.22
TSC22D3-201ENST00000315660 SETD4Q9NVD3 440 aa16.39■□□□□ 0.22
TSC22D3-201ENST00000315660 TSPAN16Q9UKR8 245 aa16.39■□□□□ 0.22
TSC22D3-201ENST00000315660 NAALADL1Q9UQQ1 740 aa16.39■□□□□ 0.22
TSC22D3-201ENST00000315660 CLEC11AQ9Y240 323 aa16.39■□□□□ 0.22
TSC22D3-201ENST00000315660 ACTL7BQ9Y614 415 aa16.39■□□□□ 0.22
TSC22D3-201ENST00000315660 FOXO6A8MYZ6 492 aa16.39■□□□□ 0.21
TSC22D3-201ENST00000315660 NPTXRO95502 500 aa16.39■□□□□ 0.21
TSC22D3-201ENST00000315660 TRUB2O95900 331 aaKnown RBP16.39■□□□□ 0.21
TSC22D3-201ENST00000315660 TAF5Q15542 800 aa16.39■□□□□ 0.21
TSC22D3-201ENST00000315660 CEP57Q86XR8 500 aa16.39■□□□□ 0.21
TSC22D3-201ENST00000315660 LRRC34Q8IZ02 419 aa16.39■□□□□ 0.21
TSC22D3-201ENST00000315660 CYP4X1Q8N118 509 aa16.39■□□□□ 0.21
TSC22D3-201ENST00000315660 MGARPQ8TDB4 240 aa16.39■□□□□ 0.21
TSC22D3-201ENST00000315660 CNPY3Q9BT09 278 aa16.39■□□□□ 0.21
TSC22D3-201ENST00000315660 CALN1Q9BXU9 219 aa16.39■□□□□ 0.21
TSC22D3-201ENST00000315660 MAK16Q9BXY0 300 aaKnown RBP16.39■□□□□ 0.21
TSC22D3-201ENST00000315660 RSAD1Q9HA92 442 aa16.39■□□□□ 0.21
TSC22D3-201ENST00000315660 GINS2Q9Y248 185 aa16.39■□□□□ 0.21
TSC22D3-201ENST00000315660 DERAQ9Y315 318 aa16.39■□□□□ 0.21
TSC22D3-201ENST00000315660 APOC4-APOC2K7ER74 178 aa16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 ADCY6O43306 1168 aa16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 APOC2P02655 101 aa16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 GPD1P21695 349 aa16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 HOXA11P31270 313 aaPredicted RBP16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 SLC8A1P32418 973 aa16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 YARSP54577 528 aaKnown RBP16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 NR1H3Q13133 447 aa16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 CCDC142Q17RM4 750 aa16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 IQSEC1Q6DN90 963 aa16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 OR6B2Q6IFH4 312 aa16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 FAM228AQ86W67 206 aa16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 GCOM2Q9BZD3 368 aaPredicted RBP16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 CXCL16Q9H2A7 254 aa16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 ADAMTS10Q9H324 1103 aa16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 EURLQ9NYK6 297 aa16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 E5RJQ4 531 aa16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 PIK3R2O00459 728 aa16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 MCF2LO15068 1137 aa16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 MGRN1O60291 552 aa16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 PFKMP08237 780 aa16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 GSTA1P08263 222 aa16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 EZRP15311 586 aaKnown RBP16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 PDGFRAP16234 1089 aa16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 DESP17661 470 aa16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 CTCFP49711 727 aaPredicted RBP16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 TMEM62Q0P6H9 643 aa16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 HIF1AQ16665 826 aa16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 ARHGEF18Q6ZSZ5 1173 aa16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 PLEKHH3Q7Z736 793 aa16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 PPIL6Q8IXY8 311 aa16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 SRRM1Q8IYB3 904 aaKnown RBP16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 ZBED8Q8IZ13 594 aa16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 C12orf29Q8N999 325 aa16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 ANKRD42Q8N9B4 389 aa16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 FAM49AQ9H0Q0 323 aaPredicted RBP16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 C10orf88Q9H8K7 445 aa16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 VPS37BQ9H9H4 285 aa16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 PPCSQ9HAB8 311 aa16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 SNTG2Q9NY99 539 aa16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 NKIRAS1Q9NYS0 192 aa16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 CITO14578 2027 aa16.38■□□□□ 0.21
TSC22D3-201ENST00000315660 C2CD4BA6NLJ0 364 aa16.37■□□□□ 0.21
TSC22D3-201ENST00000315660 RASA4BC9J798 803 aa16.37■□□□□ 0.21
TSC22D3-201ENST00000315660 ALOX15BO15296 676 aa16.37■□□□□ 0.21
TSC22D3-201ENST00000315660 RASA4O43374 803 aa16.37■□□□□ 0.21
TSC22D3-201ENST00000315660 GDF10P55107 478 aa16.37■□□□□ 0.21
TSC22D3-201ENST00000315660 FASTKD3Q14CZ7 662 aaKnown RBP16.37■□□□□ 0.21
TSC22D3-201ENST00000315660 LRRC14Q15048 493 aa16.37■□□□□ 0.21
TSC22D3-201ENST00000315660 TRNP1Q6NT89 227 aa16.37■□□□□ 0.21
TSC22D3-201ENST00000315660 SLC27A1Q6PCB7 646 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms