RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 AMHR2Q16671 573 aa26.25■■□□□ 1.79
ROM1-201ENST00000278833 PREPLQ4J6C6 727 aaPredicted RBP26.25■■□□□ 1.79
ROM1-201ENST00000278833 SPDYAQ5MJ70 313 aa26.25■■□□□ 1.79
ROM1-201ENST00000278833 EFCAB12Q6NXP0 572 aa26.25■■□□□ 1.79
ROM1-201ENST00000278833 EEPD1Q7L9B9 569 aa26.25■■□□□ 1.79
ROM1-201ENST00000278833 ACSF2Q96CM8 615 aaPredicted RBP26.25■■□□□ 1.79
ROM1-201ENST00000278833 ELOVL4Q9GZR5 314 aa26.25■■□□□ 1.79
ROM1-201ENST00000278833 ACSS3Q9H6R3 686 aa26.25■■□□□ 1.79
ROM1-201ENST00000278833 VPS37BQ9H9H4 285 aa26.25■■□□□ 1.79
ROM1-201ENST00000278833 RSAD1Q9HA92 442 aa26.25■■□□□ 1.79
ROM1-201ENST00000278833 MLXIPLQ9NP71 852 aa26.25■■□□□ 1.79
ROM1-201ENST00000278833 RABGEF1Q9UJ41 708 aa26.25■■□□□ 1.79
ROM1-201ENST00000278833 COL1A2P08123 1366 aa26.25■■□□□ 1.79
ROM1-201ENST00000278833 GPR25O00155 361 aa26.25■■□□□ 1.79
ROM1-201ENST00000278833 MICAL2O94851 1124 aa26.25■■□□□ 1.79
ROM1-201ENST00000278833 ALADP13716 330 aa26.25■■□□□ 1.79
ROM1-201ENST00000278833 CCNB1P14635 433 aa26.25■■□□□ 1.79
ROM1-201ENST00000278833 VSIG1Q86XK7 387 aa26.25■■□□□ 1.79
ROM1-201ENST00000278833 NT5DC4Q86YG4 428 aa26.25■■□□□ 1.79
ROM1-201ENST00000278833 HAUS1Q96CS2 278 aa26.25■■□□□ 1.79
ROM1-201ENST00000278833 MS4A4AQ96JQ5 239 aa26.25■■□□□ 1.79
ROM1-201ENST00000278833 ASNSD1Q9NWL6 643 aa26.25■■□□□ 1.79
ROM1-201ENST00000278833 TJP2Q9UDY2 1190 aa26.25■■□□□ 1.79
ROM1-201ENST00000278833 KIAA1257Q9ULG3 409 aa26.25■■□□□ 1.79
ROM1-201ENST00000278833 TRUB2O95900 331 aaKnown RBP26.24■■□□□ 1.79
ROM1-201ENST00000278833 NQO1P15559 274 aaKnown RBP26.24■■□□□ 1.79
ROM1-201ENST00000278833 RPL22P35268 128 aaKnown RBP26.24■■□□□ 1.79
ROM1-201ENST00000278833 RAP1GAPP47736 663 aa26.24■■□□□ 1.79
ROM1-201ENST00000278833 PKN2Q16513 984 aaKnown RBP26.24■■□□□ 1.79
ROM1-201ENST00000278833 FAM133BQ5BKY9 247 aaKnown RBP26.24■■□□□ 1.79
ROM1-201ENST00000278833 ADGRD1Q6QNK2 874 aa26.24■■□□□ 1.79
ROM1-201ENST00000278833 USP6NLQ92738 828 aa26.24■■□□□ 1.79
ROM1-201ENST00000278833 MROH8Q9H579 483 aa26.24■■□□□ 1.79
ROM1-201ENST00000278833 MINDY3Q9H8M7 445 aa26.24■■□□□ 1.79
ROM1-201ENST00000278833 ZWILCHQ9H900 591 aa26.24■■□□□ 1.79
ROM1-201ENST00000278833 IFT122Q9HBG6 1241 aa26.24■■□□□ 1.79
ROM1-201ENST00000278833 ERAP1Q9NZ08 941 aa26.24■■□□□ 1.79
ROM1-201ENST00000278833 LACTBL1A8MY62 500 aa26.23■■□□□ 1.79
ROM1-201ENST00000278833 ZWINTO95229 277 aa26.23■■□□□ 1.79
ROM1-201ENST00000278833 ATP6V1G2O95670 118 aa26.23■■□□□ 1.79
ROM1-201ENST00000278833 GPD2P43304 727 aa26.23■■□□□ 1.79
ROM1-201ENST00000278833 PLCB3Q01970 1234 aa26.23■■□□□ 1.79
ROM1-201ENST00000278833 ASRGL1Q7L266 308 aa26.23■■□□□ 1.79
ROM1-201ENST00000278833 SHCBP1Q8NEM2 672 aa26.23■■□□□ 1.79
ROM1-201ENST00000278833 TWNKQ96RR1 684 aa26.23■■□□□ 1.79
ROM1-201ENST00000278833 MMP19Q99542 508 aa26.23■■□□□ 1.79
ROM1-201ENST00000278833 PITPNM3Q9BZ71 974 aa26.23■■□□□ 1.79
ROM1-201ENST00000278833 SMYD3Q9H7B4 428 aa26.23■■□□□ 1.79
ROM1-201ENST00000278833 ECT2Q9H8V3 914 aa26.23■■□□□ 1.79
ROM1-201ENST00000278833 MCM3APO60318 1980 aa26.23■■□□□ 1.79
ROM1-201ENST00000278833 RNF8O76064 485 aa26.23■■□□□ 1.79
ROM1-201ENST00000278833 IFNB1P01574 187 aa26.23■■□□□ 1.79
ROM1-201ENST00000278833 STAG3L1P0CL83 205 aa26.23■■□□□ 1.79
ROM1-201ENST00000278833 MIPP30301 263 aa26.23■■□□□ 1.79
ROM1-201ENST00000278833 MAP2K2P36507 400 aa26.23■■□□□ 1.79
ROM1-201ENST00000278833 CLCN3P51790 818 aa26.23■■□□□ 1.79
ROM1-201ENST00000278833 ZNF143P52747 638 aaPredicted RBP26.23■■□□□ 1.79
ROM1-201ENST00000278833 GDF10P55107 478 aa26.23■■□□□ 1.79
ROM1-201ENST00000278833 MOGSQ13724 837 aa26.23■■□□□ 1.79
ROM1-201ENST00000278833 TTLL4Q14679 1199 aa26.23■■□□□ 1.79
ROM1-201ENST00000278833 KCTD2Q14681 263 aa26.23■■□□□ 1.79
ROM1-201ENST00000278833 RPAINQ86UA6 219 aa26.23■■□□□ 1.79
ROM1-201ENST00000278833 AFG1LQ8WV93 481 aa26.23■■□□□ 1.79
ROM1-201ENST00000278833 RSAD2Q8WXG1 361 aa26.23■■□□□ 1.79
ROM1-201ENST00000278833 ALKBH8Q96BT7 664 aaKnown RBP26.23■■□□□ 1.79
ROM1-201ENST00000278833 ARHGEF3Q9NR81 526 aa26.23■■□□□ 1.79
ROM1-201ENST00000278833 RBPJLQ9UBG7 517 aa26.23■■□□□ 1.79
ROM1-201ENST00000278833 C2CD2Q9Y426 696 aa26.23■■□□□ 1.79
ROM1-201ENST00000278833 VGLL3A8MV65 326 aa26.22■■□□□ 1.79
ROM1-201ENST00000278833 POC1B-GALNT4F8VUJ3 575 aa26.22■■□□□ 1.79
ROM1-201ENST00000278833 MCF2LO15068 1137 aa26.22■■□□□ 1.79
ROM1-201ENST00000278833 GTF2A2P52657 109 aa26.22■■□□□ 1.79
ROM1-201ENST00000278833 YARSP54577 528 aaKnown RBP26.22■■□□□ 1.79
ROM1-201ENST00000278833 SNAPC2Q13487 334 aa26.22■■□□□ 1.79
ROM1-201ENST00000278833 NOMO1Q15155 1222 aa26.22■■□□□ 1.79
ROM1-201ENST00000278833 STILQ15468 1287 aa26.22■■□□□ 1.79
ROM1-201ENST00000278833 ZKSCAN8Q15776 578 aaPredicted RBP26.22■■□□□ 1.79
ROM1-201ENST00000278833 WDR78Q5VTH9 848 aa26.22■■□□□ 1.79
ROM1-201ENST00000278833 JADE1Q6IE81 842 aa26.22■■□□□ 1.79
ROM1-201ENST00000278833 TMEM192Q8IY95 271 aa26.22■■□□□ 1.79
ROM1-201ENST00000278833 FITM2Q8N6M3 262 aa26.22■■□□□ 1.79
ROM1-201ENST00000278833 MZB1Q8WU39 189 aa26.22■■□□□ 1.79
ROM1-201ENST00000278833 CNPY3Q9BT09 278 aa26.22■■□□□ 1.79
ROM1-201ENST00000278833 PDZD7Q9H5P4 517 aa26.22■■□□□ 1.79
ROM1-201ENST00000278833 YY1AP1Q9H869 796 aa26.22■■□□□ 1.79
ROM1-201ENST00000278833 CD248Q9HCU0 757 aa26.22■■□□□ 1.79
ROM1-201ENST00000278833 ITGA11Q9UKX5 1188 aa26.22■■□□□ 1.79
ROM1-201ENST00000278833 USP18Q9UMW8 372 aa26.22■■□□□ 1.79
ROM1-201ENST00000278833 DPYSL4O14531 572 aa26.21■■□□□ 1.79
ROM1-201ENST00000278833 ITGB3P05106 788 aa26.21■■□□□ 1.79
ROM1-201ENST00000278833 KRT19P08727 400 aa26.21■■□□□ 1.79
ROM1-201ENST00000278833 KRT15P19012 456 aa26.21■■□□□ 1.79
ROM1-201ENST00000278833 STIP1P31948 543 aaKnown RBP26.21■■□□□ 1.79
ROM1-201ENST00000278833 MGAT5Q09328 741 aa26.21■■□□□ 1.79
ROM1-201ENST00000278833 ANKRD22Q5VYY1 191 aa26.21■■□□□ 1.79
ROM1-201ENST00000278833 FBXO16Q8IX29 292 aaPredicted RBP26.21■■□□□ 1.79
ROM1-201ENST00000278833 PYROXD1Q8WU10 500 aa26.21■■□□□ 1.79
ROM1-201ENST00000278833 TRAPPC12Q8WVT3 735 aa26.21■■□□□ 1.79
ROM1-201ENST00000278833 RMDN2Q96LZ7 410 aa26.21■■□□□ 1.79
ROM1-201ENST00000278833 WDR83Q9BRX9 315 aaKnown RBP26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms