RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 ATF7IP2Q5U623 682 aa15.95■□□□□ 0.14
DDX56-201ENST00000258772 CDR2LQ86X02 465 aaPredicted RBP15.95■□□□□ 0.14
DDX56-201ENST00000258772 APOBEC3FQ8IUX4 373 aaKnown RBP15.95■□□□□ 0.14
DDX56-201ENST00000258772 ALKBH8Q96BT7 664 aaKnown RBP15.95■□□□□ 0.14
DDX56-201ENST00000258772 BTBD7Q9P203 1132 aa15.95■□□□□ 0.14
DDX56-201ENST00000258772 SIX4Q9UIU6 781 aa15.95■□□□□ 0.14
DDX56-201ENST00000258772 GOLGA8RI6L899 631 aa15.95■□□□□ 0.14
DDX56-201ENST00000258772 TRUB2O95900 331 aaKnown RBP15.95■□□□□ 0.14
DDX56-201ENST00000258772 TSHRP16473 764 aa15.95■□□□□ 0.14
DDX56-201ENST00000258772 BASP1P80723 227 aaKnown RBP15.95■□□□□ 0.14
DDX56-201ENST00000258772 ORC1Q13415 861 aa15.95■□□□□ 0.14
DDX56-201ENST00000258772 PLEKHG4Q58EX7 1191 aa15.95■□□□□ 0.14
DDX56-201ENST00000258772 SPDYAQ5MJ70 313 aa15.95■□□□□ 0.14
DDX56-201ENST00000258772 EEF1DP3Q658K8 133 aa15.95■□□□□ 0.14
DDX56-201ENST00000258772 NLRP9Q7RTR0 991 aa15.95■□□□□ 0.14
DDX56-201ENST00000258772 CCDC125Q86Z20 511 aa15.95■□□□□ 0.14
DDX56-201ENST00000258772 ZNF398Q8TD17 642 aa15.95■□□□□ 0.14
DDX56-201ENST00000258772 HSPH1Q92598 858 aa15.95■□□□□ 0.14
DDX56-201ENST00000258772 ZNF668Q96K58 619 aaPredicted RBP15.95■□□□□ 0.14
DDX56-201ENST00000258772 SDCBP2Q9H190 292 aa15.95■□□□□ 0.14
DDX56-201ENST00000258772 VPS11Q9H270 941 aa15.95■□□□□ 0.14
DDX56-201ENST00000258772 C12orf65Q9H3J6 166 aaKnown RBP15.95■□□□□ 0.14
DDX56-201ENST00000258772 FZD8Q9H461 694 aa15.95■□□□□ 0.14
DDX56-201ENST00000258772 NPHS2Q9NP85 383 aa15.95■□□□□ 0.14
DDX56-201ENST00000258772 USP18Q9UMW8 372 aa15.95■□□□□ 0.14
DDX56-201ENST00000258772 MCF2LO15068 1137 aa15.94■□□□□ 0.14
DDX56-201ENST00000258772 B4GALT5O43286 388 aa15.94■□□□□ 0.14
DDX56-201ENST00000258772 RNF8O76064 485 aa15.94■□□□□ 0.14
DDX56-201ENST00000258772 ATP2A2P16615 1042 aaKnown RBP15.94■□□□□ 0.14
DDX56-201ENST00000258772 RASSF2P50749 326 aa15.94■□□□□ 0.14
DDX56-201ENST00000258772 RNASELQ05823 741 aaKnown RBP15.94■□□□□ 0.14
DDX56-201ENST00000258772 ACAP1Q15027 740 aa15.94■□□□□ 0.14
DDX56-201ENST00000258772 TAF1BQ53T94 588 aaPredicted RBP15.94■□□□□ 0.14
DDX56-201ENST00000258772 NOL9Q5SY16 702 aaKnown RBP15.94■□□□□ 0.14
DDX56-201ENST00000258772 FYB2Q5VWT5 728 aa15.94■□□□□ 0.14
DDX56-201ENST00000258772 ZNF449Q6P9G9 518 aa15.94■□□□□ 0.14
DDX56-201ENST00000258772 TRIM50Q86XT4 487 aa15.94■□□□□ 0.14
DDX56-201ENST00000258772 RIOX2Q8IUF8 465 aa15.94■□□□□ 0.14
DDX56-201ENST00000258772 SLC4A11Q8NBS3 891 aa15.94■□□□□ 0.14
DDX56-201ENST00000258772 SPATA18Q8TC71 538 aa15.94■□□□□ 0.14
DDX56-201ENST00000258772 TWNKQ96RR1 684 aa15.94■□□□□ 0.14
DDX56-201ENST00000258772 KLF6Q99612 283 aaPredicted RBP15.94■□□□□ 0.14
DDX56-201ENST00000258772 CALN1Q9BXU9 219 aa15.94■□□□□ 0.14
DDX56-201ENST00000258772 SLC17A7Q9P2U7 560 aa15.94■□□□□ 0.14
DDX56-201ENST00000258772 INO80B-WBP1J3KQ70 363 aa15.94■□□□□ 0.14
DDX56-201ENST00000258772 CBX6O95503 412 aa15.94■□□□□ 0.14
DDX56-201ENST00000258772 CXCL8P10145 99 aa15.94■□□□□ 0.14
DDX56-201ENST00000258772 NRLP54845 237 aa15.94■□□□□ 0.14
DDX56-201ENST00000258772 PTPN11Q06124 597 aaPredicted RBP15.94■□□□□ 0.14
DDX56-201ENST00000258772 HSDL1Q3SXM5 330 aa15.94■□□□□ 0.14
DDX56-201ENST00000258772 TREML2Q5T2D2 321 aa15.94■□□□□ 0.14
DDX56-201ENST00000258772 IGDCC3Q8IVU1 814 aa15.94■□□□□ 0.14
DDX56-201ENST00000258772 TMEM192Q8IY95 271 aa15.94■□□□□ 0.14
DDX56-201ENST00000258772 EXOC8Q8IYI6 725 aa15.94■□□□□ 0.14
DDX56-201ENST00000258772 MAB21L3Q8N8X9 362 aa15.94■□□□□ 0.14
DDX56-201ENST00000258772 MCRS1Q96EZ8 462 aa15.94■□□□□ 0.14
DDX56-201ENST00000258772 CYTH2Q99418 400 aa15.94■□□□□ 0.14
DDX56-201ENST00000258772 TBC1D10AQ9BXI6 508 aa15.94■□□□□ 0.14
DDX56-201ENST00000258772 INO80BQ9C086 356 aaPredicted RBP15.94■□□□□ 0.14
DDX56-201ENST00000258772 MANSC1Q9H8J5 431 aa15.94■□□□□ 0.14
DDX56-201ENST00000258772 RPF1Q9H9Y2 349 aaKnown RBP15.94■□□□□ 0.14
DDX56-201ENST00000258772 RSAD1Q9HA92 442 aa15.94■□□□□ 0.14
DDX56-201ENST00000258772 CHMP2BQ9UQN3 213 aa15.94■□□□□ 0.14
DDX56-201ENST00000258772 EVPLQ92817 2033 aa15.93■□□□□ 0.14
DDX56-201ENST00000258772 TRAFD1O14545 582 aaPredicted RBP15.93■□□□□ 0.14
DDX56-201ENST00000258772 GJB1P08034 283 aa15.93■□□□□ 0.14
DDX56-201ENST00000258772 STIP1P31948 543 aaKnown RBP15.93■□□□□ 0.14
DDX56-201ENST00000258772 ELK3P41970 407 aa15.93■□□□□ 0.14
DDX56-201ENST00000258772 GABRB2P47870 512 aa15.93■□□□□ 0.14
DDX56-201ENST00000258772 SLC8A3P57103 927 aa15.93■□□□□ 0.14
DDX56-201ENST00000258772 PRKG1Q13976 671 aa15.93■□□□□ 0.14
DDX56-201ENST00000258772 TMEM130Q8N3G9 435 aa15.93■□□□□ 0.14
DDX56-201ENST00000258772 NLRP4Q96MN2 994 aa15.93■□□□□ 0.14
DDX56-201ENST00000258772 GPR20Q99678 358 aa15.93■□□□□ 0.14
DDX56-201ENST00000258772 ZFP69BQ9UJL9 534 aa15.93■□□□□ 0.14
DDX56-201ENST00000258772 SRCAPQ6ZRS2 3230 aa15.93■□□□□ 0.14
DDX56-201ENST00000258772 FZD9O00144 591 aa15.93■□□□□ 0.14
DDX56-201ENST00000258772 MICAL2O94851 1124 aa15.93■□□□□ 0.14
DDX56-201ENST00000258772 IL18RAPO95256 599 aa15.93■□□□□ 0.14
DDX56-201ENST00000258772 ARIH2O95376 493 aa15.93■□□□□ 0.14
DDX56-201ENST00000258772 MT-ND3P03897 115 aa15.93■□□□□ 0.14
DDX56-201ENST00000258772 TROVE2P10155 538 aaKnown RBP eCLIP15.93■□□□□ 0.14
DDX56-201ENST00000258772 CCNG1P51959 295 aa15.93■□□□□ 0.14
DDX56-201ENST00000258772 MTDHQ86UE4 582 aaKnown RBP15.93■□□□□ 0.14
DDX56-201ENST00000258772 LONP2Q86WA8 852 aa15.93■□□□□ 0.14
DDX56-201ENST00000258772 C1orf127Q8N9H9 656 aa15.93■□□□□ 0.14
DDX56-201ENST00000258772 FAM13CQ8NE31 585 aa15.93■□□□□ 0.14
DDX56-201ENST00000258772 SLC16A10Q8TF71 515 aa15.93■□□□□ 0.14
DDX56-201ENST00000258772 MIEF2Q96C03 454 aa15.93■□□□□ 0.14
DDX56-201ENST00000258772 ELOVL4Q9GZR5 314 aa15.93■□□□□ 0.14
DDX56-201ENST00000258772 CDT1Q9H211 546 aa15.93■□□□□ 0.14
DDX56-201ENST00000258772 SMYD3Q9H7B4 428 aa15.93■□□□□ 0.14
DDX56-201ENST00000258772 ASNSD1Q9NWL6 643 aa15.93■□□□□ 0.14
DDX56-201ENST00000258772 HMGXB4Q9UGU5 601 aa15.93■□□□□ 0.14
DDX56-201ENST00000258772 SSC5DA1L4H1 1573 aa15.92■□□□□ 0.14
DDX56-201ENST00000258772 WDR90Q96KV7 1748 aa15.92■□□□□ 0.14
DDX56-201ENST00000258772 CILPO75339 1184 aa15.92■□□□□ 0.14
DDX56-201ENST00000258772 LGR5O75473 907 aa15.92■□□□□ 0.14
DDX56-201ENST00000258772 ENDOD1O94919 500 aa15.92■□□□□ 0.14
DDX56-201ENST00000258772 GPD2P43304 727 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms