RNA–Protein interactions for RNA: ENST00000238961.8

SLF2-201, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLF2, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-201ENST00000238961 FAM220AQ7Z4H9 259 aa10.64□□□□□ -0.71
SLF2-201ENST00000238961 SERAC1Q96JX3 654 aa10.64□□□□□ -0.71
SLF2-201ENST00000238961 CMTM6Q9NX76 183 aa10.64□□□□□ -0.71
SLF2-201ENST00000238961 CHORDC1Q9UHD1 332 aaPredicted RBP10.64□□□□□ -0.71
SLF2-201ENST00000238961 ARL5CA6NH57 179 aa10.64□□□□□ -0.71
SLF2-201ENST00000238961 VAMP7P51809 220 aa10.64□□□□□ -0.71
SLF2-201ENST00000238961 DUOXA2Q1HG44 320 aa10.64□□□□□ -0.71
SLF2-201ENST00000238961 FAM83BQ5T0W9 1011 aa10.64□□□□□ -0.71
SLF2-201ENST00000238961 LRRC70Q7Z2Q7 622 aa10.64□□□□□ -0.71
SLF2-201ENST00000238961 MCOLN3Q8TDD5 553 aa10.64□□□□□ -0.71
SLF2-201ENST00000238961 CIPCQ9C0C6 399 aa10.64□□□□□ -0.71
SLF2-201ENST00000238961 PCDHB9Q9Y5E1 797 aa10.64□□□□□ -0.71
SLF2-201ENST00000238961 FLT4P35916 1363 aa10.64□□□□□ -0.71
SLF2-201ENST00000238961 ENDOD1O94919 500 aa10.64□□□□□ -0.71
SLF2-201ENST00000238961 UBTFL6P0CB48 400 aaPredicted RBP10.64□□□□□ -0.71
SLF2-201ENST00000238961 IGFBP4P22692 258 aa10.64□□□□□ -0.71
SLF2-201ENST00000238961 TGFBR2P37173 567 aa10.64□□□□□ -0.71
SLF2-201ENST00000238961 PRELPP51888 382 aa10.64□□□□□ -0.71
SLF2-201ENST00000238961 NME5P56597 212 aa10.64□□□□□ -0.71
SLF2-201ENST00000238961 ZBED6P86452 979 aa10.64□□□□□ -0.71
SLF2-201ENST00000238961 TRAF2Q12933 501 aa10.64□□□□□ -0.71
SLF2-201ENST00000238961 GLB1LQ6UWU2 654 aa10.64□□□□□ -0.71
SLF2-201ENST00000238961 ERLEC1Q96DZ1 483 aa10.64□□□□□ -0.71
SLF2-201ENST00000238961 EDC3Q96F86 508 aaKnown RBP10.64□□□□□ -0.71
SLF2-201ENST00000238961 C6orf62Q9GZU0 229 aaPredicted RBP10.64□□□□□ -0.71
SLF2-201ENST00000238961 NRDE2Q9H7Z3 1164 aa10.64□□□□□ -0.71
SLF2-201ENST00000238961 NAGPAQ9UK23 515 aa10.64□□□□□ -0.71
SLF2-201ENST00000238961 TMEM5Q9Y2B1 443 aa10.64□□□□□ -0.71
SLF2-201ENST00000238961 LEMD3Q9Y2U8 911 aa10.64□□□□□ -0.71
SLF2-201ENST00000238961 KDM5AP29375 1690 aaKnown RBP10.64□□□□□ -0.71
SLF2-201ENST00000238961 A0A0X1KG70 313 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 CFAP73A6NFT4 308 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 SLC25A12O75746 678 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 NDUFA10O95299 355 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 IFNA16P05015 189 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 MYBL1P10243 752 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 AVPR1AP37288 418 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 HALP42357 657 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 NUMBP49757 651 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 CHRNB3Q05901 458 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 FAPQ12884 760 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 MYBPC2Q14324 1141 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 DDR2Q16832 855 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 DCP1BQ8IZD4 617 aaKnown RBP10.63□□□□□ -0.71
SLF2-201ENST00000238961 DSELQ8IZU8 1212 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 BBS4Q96RK4 519 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 FRMD8Q9BZ67 464 aaPredicted RBP10.63□□□□□ -0.71
SLF2-201ENST00000238961 SLC52A2Q9HAB3 445 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 FAM20BO75063 409 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 PURAQ00577 322 aaKnown RBP10.63□□□□□ -0.71
SLF2-201ENST00000238961 P3H1Q32P28 736 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 RAB11FIP2Q7L804 512 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 BLOC1S5Q8TDH9 187 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 KBTBD7Q8WVZ9 684 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 PLA2G4CQ9UP65 541 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 ZNF879B4DU55 563 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 H3BN98 237 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 TRIM38O00635 465 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 PSTPIP1O43586 416 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 ITGA4P13612 1032 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 STAT5AP42229 794 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 STAT5BP51692 787 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 NUP107P57740 925 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 TRMT11Q7Z4G4 463 aaKnown RBP10.63□□□□□ -0.71
SLF2-201ENST00000238961 SERPINB12Q96P63 405 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 KATNAL1Q9BW62 490 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 PIF1Q9H611 641 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.63□□□□□ -0.716e-6■■□□□ 12.1
SLF2-201ENST00000238961 BCLAF3A2AJT9 711 aaKnown RBP10.63□□□□□ -0.71
SLF2-201ENST00000238961 PDE5AO76074 875 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 ASNSP08243 561 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 HOXA7P31268 230 aaPredicted RBP10.63□□□□□ -0.71
SLF2-201ENST00000238961 TSNQ15631 228 aaKnown RBP10.63□□□□□ -0.71
SLF2-201ENST00000238961 IER5Q5VY09 327 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 DAW1Q8N136 415 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 TSPYL6Q8N831 410 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 USP13Q92995 863 aaPredicted RBP10.63□□□□□ -0.71
SLF2-201ENST00000238961 EMILIN2Q9BXX0 1053 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 FAM192AQ9GZU8 254 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 GPC6Q9Y625 555 aaPredicted RBP10.63□□□□□ -0.71
SLF2-201ENST00000238961 PREX2Q70Z35 1606 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 PNMA6FA0A0J9YX94 578 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 MBL2P11226 248 aaPredicted RBP10.63□□□□□ -0.71
SLF2-201ENST00000238961 QARSP47897 775 aaKnown RBP10.63□□□□□ -0.71
SLF2-201ENST00000238961 DYNLL1P63167 89 aaKnown RBP10.63□□□□□ -0.71
SLF2-201ENST00000238961 TMEM62Q0P6H9 643 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 NSUN6Q8TEA1 469 aaKnown RBP10.63□□□□□ -0.71
SLF2-201ENST00000238961 SHCBP1LQ9BZQ2 653 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 RAB6BQ9NRW1 208 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 SUCOQ9UBS9 1254 aaKnown RBP10.63□□□□□ -0.71
SLF2-201ENST00000238961 NCKAP1Q9Y2A7 1128 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 LYVE1Q9Y5Y7 322 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 ABCA8O94911 1581 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 TMCC2O75069 709 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 ATP9AO75110 1047 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 TNFRSF21O75509 655 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 RPS6KA5O75582 802 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 FTLP02792 175 aaPredicted RBP10.63□□□□□ -0.71
SLF2-201ENST00000238961 GSSP48637 474 aa10.63□□□□□ -0.71
SLF2-201ENST00000238961 PLEKHA7Q6IQ23 1121 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms