RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C DGA1Q08650 418 aa1.87□□□□□ -2.11
VPS13YLL040C USV1Q12132 391 aa1.87□□□□□ -2.11
VPS13YLL040C FAB1P34756 2278 aa1.87□□□□□ -2.11
VPS13YLL040C PAM17P36147 197 aa1.87□□□□□ -2.11
VPS13YLL040C PRE3P38624 215 aa1.87□□□□□ -2.11
VPS13YLL040C YJR146WP47174 117 aa1.87□□□□□ -2.11
VPS13YLL040C NCE103P53615 221 aa1.87□□□□□ -2.11
VPS13YLL040C LSM6Q06406 86 aaKnown RBP1.87□□□□□ -2.11
VPS13YLL040C RPL35AP0CX84 120 aaKnown RBP1.87□□□□□ -2.11
VPS13YLL040C RPL35BP0CX85 120 aaKnown RBP1.87□□□□□ -2.11
VPS13YLL040C PCL2P25693 308 aa1.87□□□□□ -2.11
VPS13YLL040C YPT53P36019 220 aa1.87□□□□□ -2.11
VPS13YLL040C MIX14Q04341 121 aa1.87□□□□□ -2.11
VPS13YLL040C YTH1Q06102 208 aaPredicted RBP1.87□□□□□ -2.11
VPS13YLL040C TDA4P47153 279 aa1.87□□□□□ -2.11
VPS13YLL040C URM1P40554 99 aaPredicted RBP1.87□□□□□ -2.11
VPS13YLL040C ERI1P62651 68 aaKnown RBP1.87□□□□□ -2.11
VPS13YLL040C DYN2Q02647 92 aa1.87□□□□□ -2.11
VPS13YLL040C NCE102Q12207 173 aaRIP-Chip data1.87□□□□□ -2.11not detected
VPS13YLL040C MSN1P22148 382 aa1.86□□□□□ -2.11
VPS13YLL040C RPL29P05747 59 aaPredicted RBP1.86□□□□□ -2.11
VPS13YLL040C GEP3Q08622 556 aa1.86□□□□□ -2.11
VPS13YLL040C PHO85P17157 305 aa1.86□□□□□ -2.11
VPS13YLL040C AGA1P32323 725 aa1.86□□□□□ -2.11
VPS13YLL040C NHP2P32495 156 aaPredicted RBP1.86□□□□□ -2.11
VPS13YLL040C YNR077CP53758 84 aa1.86□□□□□ -2.11
VPS13YLL040C YBR200W-AQ3E755 54 aa1.86□□□□□ -2.11
VPS13YLL040C YHR022CP38763 256 aa1.86□□□□□ -2.11
VPS13YLL040C PIR5P46999 287 aa1.86□□□□□ -2.11
VPS13YLL040C AIR2Q12476 344 aaKnown RBP1.86□□□□□ -2.11
VPS13YLL040C MRS3P10566 314 aa1.86□□□□□ -2.11
VPS13YLL040C FZF1P32805 299 aa1.86□□□□□ -2.11
VPS13YLL040C YHP1Q04116 353 aa1.86□□□□□ -2.11
VPS13YLL040C YOR008C-AQ3E7B9 74 aa1.86□□□□□ -2.11
VPS13YLL040C CUP2P15315 225 aa1.86□□□□□ -2.11
VPS13YLL040C HOR7Q05827 59 aa1.86□□□□□ -2.11
VPS13YLL040C YER145C-AA0A023PYF4 145 aa1.85□□□□□ -2.11
VPS13YLL040C YLR307C-AQ3E825 87 aa1.85□□□□□ -2.11
VPS13YLL040C MIG1P27705 504 aa1.85□□□□□ -2.11
VPS13YLL040C MBB1P39534 108 aa1.85□□□□□ -2.11
VPS13YLL040C DAD4P69851 72 aa1.85□□□□□ -2.11
VPS13YLL040C YDR381C-AQ3E6R5 114 aa1.85□□□□□ -2.11
VPS13YLL040C MRPL24P36525 258 aaPredicted RBP1.85□□□□□ -2.11
VPS13YLL040C YIL163CP40448 117 aa1.85□□□□□ -2.11
VPS13YLL040C STF1P01098 86 aa1.85□□□□□ -2.11
VPS13YLL040C MTC7P32633 139 aa1.85□□□□□ -2.11
VPS13YLL040C ABF2Q02486 183 aa1.85□□□□□ -2.11
VPS13YLL040C CTR2P38865 189 aa1.85□□□□□ -2.11
VPS13YLL040C ISU2Q12056 156 aa1.85□□□□□ -2.11
VPS13YLL040C IRC23Q08416 157 aa1.85□□□□□ -2.11
VPS13YLL040C VTS1Q08831 523 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
VPS13YLL040C YLR236CA0A023PZG4 107 aa1.85□□□□□ -2.11
VPS13YLL040C YPR010C-AA5Z2X5 72 aa1.85□□□□□ -2.11
VPS13YLL040C ERG28P40030 148 aa1.84□□□□□ -2.11
VPS13YLL040C YGR045CP53229 120 aa1.84□□□□□ -2.11
VPS13YLL040C KTI12P34253 313 aaKnown RBP1.84□□□□□ -2.11
VPS13YLL040C RSM19P53733 91 aaPredicted RBP1.84□□□□□ -2.11
VPS13YLL040C WSC2P53832 503 aa1.84□□□□□ -2.11
VPS13YLL040C SED1Q01589 338 aa1.84□□□□□ -2.11
VPS13YLL040C RUB1Q03919 77 aa1.84□□□□□ -2.11
VPS13YLL040C YIL002W-AQ3E7Z5 69 aa1.84□□□□□ -2.11
VPS13YLL040C YKR032WP36127 104 aa1.84□□□□□ -2.11
VPS13YLL040C LSM2P38203 95 aaKnown RBP1.84□□□□□ -2.11
VPS13YLL040C SFT1P43682 97 aa1.84□□□□□ -2.11
VPS13YLL040C MRPS12P53732 153 aa1.84□□□□□ -2.11
VPS13YLL040C YDL009CQ12210 107 aa1.84□□□□□ -2.11
VPS13YLL040C UBC5P15732 148 aa1.84□□□□□ -2.12
VPS13YLL040C YMR320WQ04897 101 aa1.84□□□□□ -2.12
VPS13YLL040C PPT2Q12036 173 aa1.84□□□□□ -2.12
VPS13YLL040C NRG2P38082 220 aa1.84□□□□□ -2.12
VPS13YLL040C YGR240C-AQ3E786 66 aa1.84□□□□□ -2.12
VPS13YLL040C UBC11P52492 156 aa1.84□□□□□ -2.12
VPS13YLL040C UBC7Q02159 165 aa1.84□□□□□ -2.12
VPS13YLL040C RXT3Q07458 294 aa1.84□□□□□ -2.12
VPS13YLL040C RPR2P40571 144 aa1.83□□□□□ -2.12
VPS13YLL040C SKO1Q02100 647 aa1.83□□□□□ -2.12
VPS13YLL040C HPA2Q06592 156 aa1.83□□□□□ -2.12
VPS13YLL040C COX17Q12287 69 aa1.83□□□□□ -2.12
VPS13YLL040C RGM1Q00453 211 aa1.83□□□□□ -2.12
VPS13YLL040C VHS2P40463 436 aa1.83□□□□□ -2.12
VPS13YLL040C ATF1P40353 525 aa1.83□□□□□ -2.12
VPS13YLL040C YMR122W-AQ3E842 84 aa1.83□□□□□ -2.12
VPS13YLL040C YMR316C-AI2HB70 103 aa1.83□□□□□ -2.12
VPS13YLL040C YFL015CP43578 164 aa1.83□□□□□ -2.12
VPS13YLL040C DCV1P43595 202 aa1.83□□□□□ -2.12
VPS13YLL040C YNL190WP53872 204 aa1.83□□□□□ -2.12
VPS13YLL040C TOA2P32774 122 aa1.82□□□□□ -2.12
VPS13YLL040C YGR164WP53291 111 aa1.82□□□□□ -2.12
VPS13YLL040C RRG8Q06109 277 aa1.82□□□□□ -2.12
VPS13YLL040C IRC25Q07951 179 aa1.82□□□□□ -2.12
VPS13YLL040C RPL2AP0CX45 254 aaKnown RBP1.82□□□□□ -2.12
VPS13YLL040C RPL2BP0CX46 254 aaKnown RBP1.82□□□□□ -2.12
VPS13YLL040C YFR057WP43625 151 aa1.82□□□□□ -2.12
VPS13YLL040C SNU13P39990 126 aaKnown RBP1.82□□□□□ -2.12
VPS13YLL040C WIP1Q2V2P8 89 aa1.82□□□□□ -2.12
VPS13YLL040C YPL038W-AQ3E7B4 63 aa1.82□□□□□ -2.12
VPS13YLL040C ISD11Q6Q560 94 aa1.82□□□□□ -2.12
VPS13YLL040C TOM6P33448 61 aa1.82□□□□□ -2.12
VPS13YLL040C YHR130CP38834 111 aa1.82□□□□□ -2.12
VPS13YLL040C COX14P39103 70 aa1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 48.4 ms