RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 ZNF419Q96HQ0 510 aaPredicted RBP11.9□□□□□ -0.5
PTP4A1-207ENST00000639568 IL21RQ9HBE5 538 aa11.9□□□□□ -0.5
PTP4A1-207ENST00000639568 NCOA5Q9HCD5 579 aaKnown RBP11.9□□□□□ -0.5
PTP4A1-207ENST00000639568 PTPRHQ9HD43 1115 aa11.9□□□□□ -0.5
PTP4A1-207ENST00000639568 ZDHHC4Q9NPG8 344 aa11.9□□□□□ -0.5
PTP4A1-207ENST00000639568 ABI2Q9NYB9 513 aaPredicted RBP11.9□□□□□ -0.5
PTP4A1-207ENST00000639568 UXTQ9UBK9 157 aaPredicted RBP11.9□□□□□ -0.5
PTP4A1-207ENST00000639568 CYP8B1Q9UNU6 501 aa11.9□□□□□ -0.5
PTP4A1-207ENST00000639568 NID2Q14112 1375 aa11.9□□□□□ -0.5
PTP4A1-207ENST00000639568 STK36Q9NRP7 1315 aa11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 MGAQ8IWI9 3026 aa11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 CCDC169A6NNP5 214 aa11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 MEI4A8MW99 385 aa11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 CPLX1O14810 134 aa11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 TLX3O43711 291 aaPredicted RBP11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 HAPLN1P10915 354 aaPredicted RBP11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 GABRG2P18507 467 aa11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 LRPAP1P30533 357 aa11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 GRIA2P42262 883 aa11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 TXKP42681 527 aa11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 KIR2DL1P43626 348 aaPredicted RBP11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 SPAG1Q07617 926 aa11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 RESTQ13127 1097 aa11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 KCNB1Q14721 858 aa11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 NPY5RQ15761 445 aa11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 CALCRLQ16602 461 aa11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 SLC10A6Q3KNW5 377 aa11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 MPZL3Q6UWV2 235 aa11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 DHRS13Q6UX07 377 aa11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 METTL23Q86XA0 190 aa11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 FMNL3Q8IVF7 1028 aa11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 SFTPA1Q8IWL2 248 aa11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 THEM5Q8N1Q8 247 aa11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 KRI1Q8N9T8 703 aaKnown RBP11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 FSIP1Q8NA03 581 aa11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 OR10T2Q8NGX3 314 aa11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 KIFAP3Q92845 792 aa11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 SENP8Q96LD8 212 aa11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 TARS2Q9BW92 718 aaKnown RBP11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 ZCWPW1Q9H0M4 648 aa11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 MIR1-1HGQ9H1L0 117 aa11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 ARHGEF4Q9NR80 690 aa11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 KCNJ14Q9UNX9 436 aa11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 PCDHGB2Q9Y5G2 931 aa11.89□□□□□ -0.51
PTP4A1-207ENST00000639568 TBC1D3BA6NDS4 549 aa11.88□□□□□ -0.51
PTP4A1-207ENST00000639568 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.88□□□□□ -0.51
PTP4A1-207ENST00000639568 XPOTO43592 962 aaKnown RBP11.88□□□□□ -0.51
PTP4A1-207ENST00000639568 HDCP19113 662 aa11.88□□□□□ -0.51
PTP4A1-207ENST00000639568 EIF2DP41214 584 aaKnown RBP11.88□□□□□ -0.51
PTP4A1-207ENST00000639568 SLC6A11P48066 632 aa11.88□□□□□ -0.51
PTP4A1-207ENST00000639568 TLE3Q04726 772 aa11.88□□□□□ -0.51
PTP4A1-207ENST00000639568 HLA-BQ31612 363 aa11.88□□□□□ -0.51
PTP4A1-207ENST00000639568 TSGA10IPQ3SY00 556 aa11.88□□□□□ -0.51
PTP4A1-207ENST00000639568 NUDT18Q6ZVK8 323 aa11.88□□□□□ -0.51
PTP4A1-207ENST00000639568 RASEFQ8IZ41 740 aa11.88□□□□□ -0.51
PTP4A1-207ENST00000639568 ARL14EPQ8N8R7 260 aaPredicted RBP11.88□□□□□ -0.51
PTP4A1-207ENST00000639568 FGF11Q92914 225 aa11.88□□□□□ -0.51
PTP4A1-207ENST00000639568 SLC22A12Q96S37 553 aa11.88□□□□□ -0.51
PTP4A1-207ENST00000639568 POLD4Q9HCU8 107 aa11.88□□□□□ -0.51
PTP4A1-207ENST00000639568 NXF1Q9UBU9 619 aaKnown RBP11.88□□□□□ -0.51
PTP4A1-207ENST00000639568 DSEQ9UL01 958 aa11.88□□□□□ -0.51
PTP4A1-207ENST00000639568 UBQLN1Q9UMX0 589 aaKnown RBP11.88□□□□□ -0.51
PTP4A1-207ENST00000639568 FNDC3AQ9Y2H6 1198 aaKnown RBP11.88□□□□□ -0.51
PTP4A1-207ENST00000639568 PCDH15Q96QU1 1955 aa11.88□□□□□ -0.51
PTP4A1-207ENST00000639568 PHLPP2Q6ZVD8 1323 aa11.87□□□□□ -0.51
PTP4A1-207ENST00000639568 PTPN13Q12923 2485 aa11.87□□□□□ -0.51
PTP4A1-207ENST00000639568 PI4KAP42356 2102 aa11.87□□□□□ -0.51
PTP4A1-207ENST00000639568 FAM205CA6NFA0 338 aa11.87□□□□□ -0.51
PTP4A1-207ENST00000639568 PRPF40AO75400 957 aaKnown RBP11.87□□□□□ -0.51
PTP4A1-207ENST00000639568 HOXB2P14652 356 aa11.87□□□□□ -0.51
PTP4A1-207ENST00000639568 CPA1P15085 419 aa11.87□□□□□ -0.51
PTP4A1-207ENST00000639568 XBP1P17861 261 aa11.87□□□□□ -0.51
PTP4A1-207ENST00000639568 CYP3A5P20815 502 aa11.87□□□□□ -0.51
PTP4A1-207ENST00000639568 PAX3P23760 479 aa11.87□□□□□ -0.51
PTP4A1-207ENST00000639568 PDE6CP51160 858 aa11.87□□□□□ -0.51
PTP4A1-207ENST00000639568 LILRA4P59901 499 aa11.87□□□□□ -0.51
PTP4A1-207ENST00000639568 KDSRQ06136 332 aa11.87□□□□□ -0.51
PTP4A1-207ENST00000639568 CCDC173Q0VFZ6 552 aa11.87□□□□□ -0.51
PTP4A1-207ENST00000639568 SEZ6Q53EL9 994 aa11.87□□□□□ -0.51
PTP4A1-207ENST00000639568 SDE2Q6IQ49 451 aa11.87□□□□□ -0.51
PTP4A1-207ENST00000639568 DBX2Q6ZNG2 339 aa11.87□□□□□ -0.51
PTP4A1-207ENST00000639568 PRICKLE2Q7Z3G6 844 aa11.87□□□□□ -0.51
PTP4A1-207ENST00000639568 CATSPER3Q86XQ3 398 aa11.87□□□□□ -0.51
PTP4A1-207ENST00000639568 DCP1BQ8IZD4 617 aaKnown RBP11.87□□□□□ -0.51
PTP4A1-207ENST00000639568 ZCCHC9Q8N567 271 aaKnown RBP11.87□□□□□ -0.51
PTP4A1-207ENST00000639568 ZNF513Q8N8E2 541 aaPredicted RBP11.87□□□□□ -0.51
PTP4A1-207ENST00000639568 SNIP1Q8TAD8 396 aaKnown RBP11.87□□□□□ -0.51
PTP4A1-207ENST00000639568 KCNV2Q8TDN2 545 aa11.87□□□□□ -0.51
PTP4A1-207ENST00000639568 PLEKHA5Q9HAU0 1116 aa11.87□□□□□ -0.51
PTP4A1-207ENST00000639568 TUFT1Q9NNX1 390 aa11.87□□□□□ -0.51
PTP4A1-207ENST00000639568 PCDHB5Q9Y5E4 795 aa11.87□□□□□ -0.51
PTP4A1-207ENST00000639568 ARID2Q68CP9 1835 aa11.87□□□□□ -0.51
PTP4A1-207ENST00000639568 ADAMTS9Q9P2N4 1935 aa11.87□□□□□ -0.51
PTP4A1-207ENST00000639568 MYO9AB2RTY4 2548 aa11.86□□□□□ -0.51
PTP4A1-207ENST00000639568 A0A0A0MRY4 1105 aa11.86□□□□□ -0.51
PTP4A1-207ENST00000639568 SLC9A3R1O14745 358 aaPredicted RBP11.86□□□□□ -0.51
PTP4A1-207ENST00000639568 ADH1CP00326 375 aa11.86□□□□□ -0.51
PTP4A1-207ENST00000639568 CYP17A1P05093 508 aa11.86□□□□□ -0.51
PTP4A1-207ENST00000639568 NFICP08651 508 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms