RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 TMEM120AQ9BXJ8 343 aa17.33■□□□□ 0.37
SCARB2-210ENST00000638567 USP18Q9UMW8 372 aa17.33■□□□□ 0.37
SCARB2-210ENST00000638567 SRRM3A6NNA2 597 aaPredicted RBP17.33■□□□□ 0.36
SCARB2-210ENST00000638567 TCN1P20061 433 aaPredicted RBP17.33■□□□□ 0.36
SCARB2-210ENST00000638567 DRG2P55039 364 aaKnown RBP17.33■□□□□ 0.36
SCARB2-210ENST00000638567 MARSP56192 900 aaKnown RBP17.33■□□□□ 0.36
SCARB2-210ENST00000638567 PTK6Q13882 451 aa17.33■□□□□ 0.36
SCARB2-210ENST00000638567 PRCCQ92733 491 aaPredicted RBP17.33■□□□□ 0.36
SCARB2-210ENST00000638567 C20orf96Q9NUD7 363 aaPredicted RBP17.33■□□□□ 0.36
SCARB2-210ENST00000638567 ORC6Q9Y5N6 252 aa17.33■□□□□ 0.36
SCARB2-210ENST00000638567 NCANO14594 1321 aa17.33■□□□□ 0.36
SCARB2-210ENST00000638567 hCG_2014768A0A024R1R8 64 aa17.33■□□□□ 0.36
SCARB2-210ENST00000638567 ARHGAP10A1A4S6 786 aa17.33■□□□□ 0.36
SCARB2-210ENST00000638567 PPP1R11O60927 126 aaPredicted RBP17.33■□□□□ 0.36
SCARB2-210ENST00000638567 DGKIO75912 1065 aa17.33■□□□□ 0.36
SCARB2-210ENST00000638567 DNAJC8O75937 253 aaPredicted RBP17.33■□□□□ 0.36
SCARB2-210ENST00000638567 HSD17B4P51659 736 aa17.33■□□□□ 0.36
SCARB2-210ENST00000638567 AQP5P55064 265 aa17.33■□□□□ 0.36
SCARB2-210ENST00000638567 SATB1Q01826 763 aa17.33■□□□□ 0.36
SCARB2-210ENST00000638567 RASA2Q15283 850 aa17.33■□□□□ 0.36
SCARB2-210ENST00000638567 MAP4K3Q8IVH8 894 aa17.33■□□□□ 0.36
SCARB2-210ENST00000638567 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.33■□□□□ 0.36
SCARB2-210ENST00000638567 ZBTB45Q96K62 511 aaPredicted RBP17.33■□□□□ 0.36
SCARB2-210ENST00000638567 MAP3K20Q9NYL2 800 aaKnown RBP17.33■□□□□ 0.36
SCARB2-210ENST00000638567 FAM198AQ9UFP1 575 aa17.33■□□□□ 0.36
SCARB2-210ENST00000638567 FER1L4A9Z1Z3 1794 aa17.32■□□□□ 0.36
SCARB2-210ENST00000638567 LSM8O95777 96 aaKnown RBP17.32■□□□□ 0.36
SCARB2-210ENST00000638567 ADRB2P07550 413 aa17.32■□□□□ 0.36
SCARB2-210ENST00000638567 NUDT17P0C025 328 aa17.32■□□□□ 0.36
SCARB2-210ENST00000638567 ELK3P41970 407 aa17.32■□□□□ 0.36
SCARB2-210ENST00000638567 COPAP53621 1224 aa17.32■□□□□ 0.36
SCARB2-210ENST00000638567 PDK1Q15118 436 aa17.32■□□□□ 0.36
SCARB2-210ENST00000638567 DAB2IPQ5VWQ8 1189 aa17.32■□□□□ 0.36
SCARB2-210ENST00000638567 HAUS8Q9BT25 410 aa17.32■□□□□ 0.36
SCARB2-210ENST00000638567 MAGEB5Q9BZ81 275 aa17.32■□□□□ 0.36
SCARB2-210ENST00000638567 KRT82Q9NSB4 513 aa17.32■□□□□ 0.36
SCARB2-210ENST00000638567 GEMIN8Q9NWZ8 242 aaKnown RBP17.32■□□□□ 0.36
SCARB2-210ENST00000638567 DONSONQ9NYP3 566 aa17.32■□□□□ 0.36
SCARB2-210ENST00000638567 PCDHAC2Q9Y5I4 1007 aa17.32■□□□□ 0.36
SCARB2-210ENST00000638567 RPS6KL1Q9Y6S9 549 aa17.32■□□□□ 0.36
SCARB2-210ENST00000638567 NID2Q14112 1375 aa17.32■□□□□ 0.36
SCARB2-210ENST00000638567 TULP2O00295 520 aa17.32■□□□□ 0.36
SCARB2-210ENST00000638567 EEF2KO00418 725 aaKnown RBP17.32■□□□□ 0.36
SCARB2-210ENST00000638567 MAGEB2O15479 319 aa17.32■□□□□ 0.36
SCARB2-210ENST00000638567 HBP1O60381 514 aa17.32■□□□□ 0.36
SCARB2-210ENST00000638567 LCA5LO95447 670 aa17.32■□□□□ 0.36
SCARB2-210ENST00000638567 MCF2P10911 925 aa17.32■□□□□ 0.36
SCARB2-210ENST00000638567 GMPSP49915 693 aaPredicted RBP17.32■□□□□ 0.36
SCARB2-210ENST00000638567 DACT2Q5SW24 774 aa17.32■□□□□ 0.36
SCARB2-210ENST00000638567 TEDDM1Q5T9Z0 273 aa17.32■□□□□ 0.36
SCARB2-210ENST00000638567 AGBL3Q8NEM8 1001 aa17.32■□□□□ 0.36
SCARB2-210ENST00000638567 GGA3Q9NZ52 723 aa17.32■□□□□ 0.36
SCARB2-210ENST00000638567 ACADSP16219 412 aa17.32■□□□□ 0.36
SCARB2-210ENST00000638567 DDR1Q08345 913 aa17.32■□□□□ 0.36
SCARB2-210ENST00000638567 CHST13Q8NET6 341 aa17.32■□□□□ 0.36
SCARB2-210ENST00000638567 PDCD6IPQ8WUM4 868 aaKnown RBP17.32■□□□□ 0.36
SCARB2-210ENST00000638567 PWWP2AQ96N64 755 aa17.32■□□□□ 0.36
SCARB2-210ENST00000638567 FRMD8P1Q9BZ68 369 aaPredicted RBP17.32■□□□□ 0.36
SCARB2-210ENST00000638567 ING2Q9H160 280 aa17.32■□□□□ 0.36
SCARB2-210ENST00000638567 C15orf41Q9Y2V0 281 aa17.32■□□□□ 0.36
SCARB2-210ENST00000638567 CDY2AQ9Y6F7 541 aa17.32■□□□□ 0.36
SCARB2-210ENST00000638567 CDY1Q9Y6F8 540 aa17.32■□□□□ 0.36
SCARB2-210ENST00000638567 OPLAHO14841 1288 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 EPHB2P29323 1055 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 HOXA10P31260 410 aaPredicted RBP17.31■□□□□ 0.36
SCARB2-210ENST00000638567 HYIQ5T013 277 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 FAM71AQ8IYT1 594 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 TEKT4Q8WW24 435 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 RXFP2Q8WXD0 754 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 NRBF2Q96F24 287 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 IFT43Q96FT9 208 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 GGA2Q9UJY4 613 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 F8VP50 259 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 ZCCHC18P0CG32 403 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 CALB2P22676 271 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 ADRA1DP25100 572 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 AMHR2Q16671 573 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 QPCTQ16769 361 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 C15orf52Q6ZUT6 534 aaKnown RBP17.31■□□□□ 0.36
SCARB2-210ENST00000638567 PTF1AQ7RTS3 328 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 ACOT1Q86TX2 421 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 DDIASQ8IXT1 998 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 THEM5Q8N1Q8 247 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 GALNT4Q8N4A0 578 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 CKAP2Q8WWK9 683 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 VCPIP1Q96JH7 1222 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 CNPY3Q9BT09 278 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 C10orf88Q9H8K7 445 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 ERAP1Q9NZ08 941 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 WARS2Q9UGM6 360 aaKnown RBP17.31■□□□□ 0.36
SCARB2-210ENST00000638567 SLC39A10Q9ULF5 831 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 AURKCQ9UQB9 309 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 TSPY1Q01534 308 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 BIRC2Q13490 618 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 GPR162Q16538 588 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 FAM172AQ8WUF8 416 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 SHC3Q92529 594 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 PTPRN2Q92932 1015 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 EME1Q96AY2 570 aa17.31■□□□□ 0.36
SCARB2-210ENST00000638567 ERVK-5Q9HDB9 667 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms