RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 RGS9BPQ6ZS82 235 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 PCGF5Q86SE9 256 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 TRIM50Q86XT4 487 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 NAT8LQ8N9F0 302 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 KCTD6Q8NC69 237 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 HSPH1Q92598 858 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 KCNN1Q92952 543 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 RAB3IPQ96QF0 476 aaPredicted RBP12.38□□□□□ -0.43
C11orf54-215ENST00000617482 PAFAH2Q99487 392 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 XYLT2Q9H1B5 865 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 SYNCQ9H7C4 482 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 ZNF112Q9UJU3 913 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 DCTN4Q9UJW0 460 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 PCDHGC3Q9UN70 934 aa12.38□□□□□ -0.43
C11orf54-215ENST00000617482 COL11A1P12107 1806 aaPredicted RBP12.38□□□□□ -0.43
C11orf54-215ENST00000617482 PCNTO95613 3336 aa12.37□□□□□ -0.43
C11orf54-215ENST00000617482 RGPD3A6NKT7 1758 aaPredicted RBP12.37□□□□□ -0.43
C11orf54-215ENST00000617482 RGPD4Q7Z3J3 1758 aa12.37□□□□□ -0.43
C11orf54-215ENST00000617482 SIGLEC16A6NMB1 481 aa12.37□□□□□ -0.43
C11orf54-215ENST00000617482 C19orf81C9J6K1 198 aa12.37□□□□□ -0.43
C11orf54-215ENST00000617482 MAFO75444 373 aaPredicted RBP12.37□□□□□ -0.43
C11orf54-215ENST00000617482 PRKCBP05771 671 aa12.37□□□□□ -0.43
C11orf54-215ENST00000617482 T-ENOLP0DO92 83 aa12.37□□□□□ -0.43
C11orf54-215ENST00000617482 CDH5P33151 784 aaPredicted RBP12.37□□□□□ -0.43
C11orf54-215ENST00000617482 PHBP35232 272 aa12.37□□□□□ -0.43
C11orf54-215ENST00000617482 EFNA5P52803 228 aa12.37□□□□□ -0.43
C11orf54-215ENST00000617482 YWHAEP62258 255 aaKnown RBP12.37□□□□□ -0.43
C11orf54-215ENST00000617482 BASP1P80723 227 aaKnown RBP12.37□□□□□ -0.43
C11orf54-215ENST00000617482 HADHQ16836 314 aaKnown RBP12.37□□□□□ -0.43
C11orf54-215ENST00000617482 POLNQ7Z5Q5 900 aa12.37□□□□□ -0.43
C11orf54-215ENST00000617482 RFX6Q8HWS3 928 aa12.37□□□□□ -0.43
C11orf54-215ENST00000617482 ATP11CQ8NB49 1132 aa12.37□□□□□ -0.43
C11orf54-215ENST00000617482 KCNV2Q8TDN2 545 aa12.37□□□□□ -0.43
C11orf54-215ENST00000617482 TCP10LQ8TDR4 215 aa12.37□□□□□ -0.43
C11orf54-215ENST00000617482 C10orf82Q8WW14 230 aa12.37□□□□□ -0.43
C11orf54-215ENST00000617482 C12orf42Q96LP6 360 aa12.37□□□□□ -0.43
C11orf54-215ENST00000617482 CPXM1Q96SM3 734 aa12.37□□□□□ -0.43
C11orf54-215ENST00000617482 CALN1Q9BXU9 219 aa12.37□□□□□ -0.43
C11orf54-215ENST00000617482 METTL5Q9NRN9 209 aaKnown RBP12.37□□□□□ -0.43
C11orf54-215ENST00000617482 PIM2Q9P1W9 311 aa12.37□□□□□ -0.43
C11orf54-215ENST00000617482 CPSF3Q9UKF6 684 aaKnown RBP12.37□□□□□ -0.43
C11orf54-215ENST00000617482 DCTN3O75935 186 aa12.37□□□□□ -0.43
C11orf54-215ENST00000617482 TMEM63AO94886 807 aa12.37□□□□□ -0.43
C11orf54-215ENST00000617482 KRT7P08729 469 aa12.37□□□□□ -0.43
C11orf54-215ENST00000617482 HOXC6P09630 235 aa12.37□□□□□ -0.43
C11orf54-215ENST00000617482 POLR2BP30876 1174 aaKnown RBP12.37□□□□□ -0.43
C11orf54-215ENST00000617482 TAF1BQ53T94 588 aaPredicted RBP12.37□□□□□ -0.43
C11orf54-215ENST00000617482 PLEKHG4Q58EX7 1191 aa12.37□□□□□ -0.43
C11orf54-215ENST00000617482 DNERQ8NFT8 737 aa12.37□□□□□ -0.43
C11orf54-215ENST00000617482 ZBTB10Q96DT7 871 aa12.37□□□□□ -0.43
C11orf54-215ENST00000617482 SLC17A7Q9P2U7 560 aa12.37□□□□□ -0.43
C11orf54-215ENST00000617482 XPO7Q9UIA9 1087 aaKnown RBP12.37□□□□□ -0.43
C11orf54-215ENST00000617482 STRIP2Q9ULQ0 834 aa12.37□□□□□ -0.43
C11orf54-215ENST00000617482 B4GALT5O43286 388 aa12.36□□□□□ -0.43
C11orf54-215ENST00000617482 ATP5HO75947 161 aa12.36□□□□□ -0.43
C11orf54-215ENST00000617482 ZWINTO95229 277 aa12.36□□□□□ -0.43
C11orf54-215ENST00000617482 ZBTB7AO95365 584 aa12.36□□□□□ -0.43
C11orf54-215ENST00000617482 ATP2A2P16615 1042 aaKnown RBP12.36□□□□□ -0.43
C11orf54-215ENST00000617482 CDC25CP30307 473 aa12.36□□□□□ -0.43
C11orf54-215ENST00000617482 EIF3EP60228 445 aaKnown RBP12.36□□□□□ -0.43
C11orf54-215ENST00000617482 ANGEL2Q5VTE6 544 aaKnown RBP12.36□□□□□ -0.43
C11orf54-215ENST00000617482 ADGRD1Q6QNK2 874 aa12.36□□□□□ -0.43
C11orf54-215ENST00000617482 BBS12Q6ZW61 710 aa12.36□□□□□ -0.43
C11orf54-215ENST00000617482 DPH6Q7L8W6 267 aa12.36□□□□□ -0.43
C11orf54-215ENST00000617482 MTDHQ86UE4 582 aaKnown RBP12.36□□□□□ -0.43
C11orf54-215ENST00000617482 IGDCC3Q8IVU1 814 aa12.36□□□□□ -0.43
C11orf54-215ENST00000617482 TMEM192Q8IY95 271 aa12.36□□□□□ -0.43
C11orf54-215ENST00000617482 ZNF570Q96NI8 536 aa12.36□□□□□ -0.43
C11orf54-215ENST00000617482 LRMDAQ9H2I8 198 aa12.36□□□□□ -0.43
C11orf54-215ENST00000617482 NKX1-2Q9UD57 310 aaPredicted RBP12.36□□□□□ -0.43
C11orf54-215ENST00000617482 CHMP2BQ9UQN3 213 aa12.36□□□□□ -0.43
C11orf54-215ENST00000617482 NUMBLQ9Y6R0 609 aa12.36□□□□□ -0.43
C11orf54-215ENST00000617482 PIK3R2O00459 728 aa12.36□□□□□ -0.43
C11orf54-215ENST00000617482 ABLIM1O14639 778 aa12.36□□□□□ -0.43
C11orf54-215ENST00000617482 ERBB2P04626 1255 aa12.36□□□□□ -0.43
C11orf54-215ENST00000617482 MIPP30301 263 aa12.36□□□□□ -0.43
C11orf54-215ENST00000617482 MMRN1Q13201 1228 aa12.36□□□□□ -0.43
C11orf54-215ENST00000617482 GRM1Q13255 1194 aa12.36□□□□□ -0.43
C11orf54-215ENST00000617482 FAM160B1Q5W0V3 765 aa12.36□□□□□ -0.43
C11orf54-215ENST00000617482 NPNTQ6UXI9 565 aa12.36□□□□□ -0.43
C11orf54-215ENST00000617482 NLRP9Q7RTR0 991 aa12.36□□□□□ -0.43
C11orf54-215ENST00000617482 ZC3H18Q86VM9 953 aaKnown RBP12.36□□□□□ -0.43
C11orf54-215ENST00000617482 LONP2Q86WA8 852 aa12.36□□□□□ -0.43
C11orf54-215ENST00000617482 CCDC125Q86Z20 511 aa12.36□□□□□ -0.43
C11orf54-215ENST00000617482 PDIK1LQ8N165 341 aa12.36□□□□□ -0.43
C11orf54-215ENST00000617482 TTC13Q8NBP0 860 aa12.36□□□□□ -0.43
C11orf54-215ENST00000617482 TRAPPC12Q8WVT3 735 aa12.36□□□□□ -0.43
C11orf54-215ENST00000617482 SLC7A6OSQ96CW6 309 aaPredicted RBP12.36□□□□□ -0.43
C11orf54-215ENST00000617482 NLRP4Q96MN2 994 aa12.36□□□□□ -0.43
C11orf54-215ENST00000617482 TBC1D10AQ9BXI6 508 aa12.36□□□□□ -0.43
C11orf54-215ENST00000617482 ZMYND8Q9ULU4 1186 aaPredicted RBP12.36□□□□□ -0.43
C11orf54-215ENST00000617482 TNNC2P02585 160 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 RBP3P10745 1247 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 EPHB2P29323 1055 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 RASA2Q15283 850 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 SH3PXD2AQ5TCZ1 1133 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 XYLT1Q86Y38 959 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 ZBTB8OSQ8IWT0 167 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 RFWD2Q8NHY2 731 aa12.35□□□□□ -0.43
C11orf54-215ENST00000617482 SPATA18Q8TC71 538 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms