RNA–Protein interactions for RNA: ENST00000599693.5

XRCC1-209, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-209ENST00000599693 SEC13P55735 322 aa16.05■□□□□ 0.16
XRCC1-209ENST00000599693 MYL7Q01449 175 aa16.05■□□□□ 0.16
XRCC1-209ENST00000599693 KCNB1Q14721 858 aa16.05■□□□□ 0.16
XRCC1-209ENST00000599693 CFAP221Q4G0U5 840 aa16.05■□□□□ 0.16
XRCC1-209ENST00000599693 TMEM86AQ8N2M4 240 aa16.05■□□□□ 0.16
XRCC1-209ENST00000599693 ARL14EPQ8N8R7 260 aaPredicted RBP16.05■□□□□ 0.16
XRCC1-209ENST00000599693 FSIP1Q8NA03 581 aa16.05■□□□□ 0.16
XRCC1-209ENST00000599693 MDGA1Q8NFP4 955 aa16.05■□□□□ 0.16
XRCC1-209ENST00000599693 POMGNT1Q8WZA1 660 aa16.05■□□□□ 0.16
XRCC1-209ENST00000599693 GATA6Q92908 595 aa16.05■□□□□ 0.16
XRCC1-209ENST00000599693 GTF3C4Q9UKN8 822 aa16.05■□□□□ 0.16
XRCC1-209ENST00000599693 MMP17Q9ULZ9 603 aa16.05■□□□□ 0.16
XRCC1-209ENST00000599693 ARHGAP26Q9UNA1 814 aa16.05■□□□□ 0.16
XRCC1-209ENST00000599693 TNRC6BQ9UPQ9 1833 aaKnown RBP16.05■□□□□ 0.16
XRCC1-209ENST00000599693 ITGB3P05106 788 aa16.04■□□□□ 0.16
XRCC1-209ENST00000599693 ADSSP30520 456 aa16.04■□□□□ 0.16
XRCC1-209ENST00000599693 OPRD1P41143 372 aa16.04■□□□□ 0.16
XRCC1-209ENST00000599693 DHPSP49366 369 aaPredicted RBP16.04■□□□□ 0.16
XRCC1-209ENST00000599693 WNT7BP56706 349 aa16.04■□□□□ 0.16
XRCC1-209ENST00000599693 IRX4P78413 519 aa16.04■□□□□ 0.16
XRCC1-209ENST00000599693 TFAMQ00059 246 aaKnown RBP16.04■□□□□ 0.16
XRCC1-209ENST00000599693 POSTNQ15063 836 aa16.04■□□□□ 0.16
XRCC1-209ENST00000599693 CCDC142Q17RM4 750 aa16.04■□□□□ 0.16
XRCC1-209ENST00000599693 C2orf27AQ580R0 203 aa16.04■□□□□ 0.16
XRCC1-209ENST00000599693 SPATA2LQ8IUW3 424 aaPredicted RBP16.04■□□□□ 0.16
XRCC1-209ENST00000599693 SCN4BQ8IWT1 228 aa16.04■□□□□ 0.16
XRCC1-209ENST00000599693 LRRC52Q8N7C0 313 aa16.04■□□□□ 0.16
XRCC1-209ENST00000599693 C1orf127Q8N9H9 656 aa16.04■□□□□ 0.16
XRCC1-209ENST00000599693 SPATA18Q8TC71 538 aa16.04■□□□□ 0.16
XRCC1-209ENST00000599693 HVCN1Q96D96 273 aa16.04■□□□□ 0.16
XRCC1-209ENST00000599693 FUBP3Q96I24 572 aaKnown RBP eCLIP16.04■□□□□ 0.16
XRCC1-209ENST00000599693 SCNM1Q9BWG6 230 aa16.04■□□□□ 0.16
XRCC1-209ENST00000599693 IKZF4Q9H2S9 585 aa16.04■□□□□ 0.16
XRCC1-209ENST00000599693 LINC00597Q9H2U6 94 aa16.04■□□□□ 0.16
XRCC1-209ENST00000599693 EVLQ9UI08 416 aaPredicted RBP16.04■□□□□ 0.16
XRCC1-209ENST00000599693 AGAP1Q9UPQ3 857 aa16.04■□□□□ 0.16
XRCC1-209ENST00000599693 ASCC3Q8N3C0 2202 aaKnown RBP16.03■□□□□ 0.16
XRCC1-209ENST00000599693 DSPP15924 2871 aaKnown RBP16.03■□□□□ 0.16
XRCC1-209ENST00000599693 HOXB3P14651 431 aaPredicted RBP16.03■□□□□ 0.16
XRCC1-209ENST00000599693 HDCP19113 662 aa16.03■□□□□ 0.16
XRCC1-209ENST00000599693 PCSK1P29120 753 aa16.03■□□□□ 0.16
XRCC1-209ENST00000599693 MAGEA11P43364 429 aa16.03■□□□□ 0.16
XRCC1-209ENST00000599693 PDE6CP51160 858 aa16.03■□□□□ 0.16
XRCC1-209ENST00000599693 LMAN2Q12907 356 aa16.03■□□□□ 0.16
XRCC1-209ENST00000599693 CRY1Q16526 586 aa16.03■□□□□ 0.16
XRCC1-209ENST00000599693 GAB4Q2WGN9 574 aa16.03■□□□□ 0.16
XRCC1-209ENST00000599693 UAP1L1Q3KQV9 507 aa16.03■□□□□ 0.16
XRCC1-209ENST00000599693 OSTM1Q86WC4 334 aa16.03■□□□□ 0.16
XRCC1-209ENST00000599693 BRSK2Q8IWQ3 736 aa16.03■□□□□ 0.16
XRCC1-209ENST00000599693 CCDC33Q8N5R6 958 aa16.03■□□□□ 0.16
XRCC1-209ENST00000599693 DEFB124Q8NES8 71 aa16.03■□□□□ 0.16
XRCC1-209ENST00000599693 RASSF8Q8NHQ8 419 aa16.03■□□□□ 0.16
XRCC1-209ENST00000599693 OLIG1Q8TAK6 271 aa16.03■□□□□ 0.16
XRCC1-209ENST00000599693 LARP4BQ92615 738 aaKnown RBP16.03■□□□□ 0.16
XRCC1-209ENST00000599693 PIGKQ92643 395 aa16.03■□□□□ 0.16
XRCC1-209ENST00000599693 FAM213AQ9BRX8 229 aa16.03■□□□□ 0.16
XRCC1-209ENST00000599693 GDAP2Q9NXN4 497 aa16.03■□□□□ 0.16
XRCC1-209ENST00000599693 PLXND1Q9Y4D7 1925 aa16.03■□□□□ 0.16
XRCC1-209ENST00000599693 ANTXRLA6NF34 631 aa16.02■□□□□ 0.16
XRCC1-209ENST00000599693 SRRM3A6NNA2 597 aaPredicted RBP16.02■□□□□ 0.16
XRCC1-209ENST00000599693 PPP1R37O75864 691 aa16.02■□□□□ 0.16
XRCC1-209ENST00000599693 ALDH1A2O94788 518 aa16.02■□□□□ 0.16
XRCC1-209ENST00000599693 PFKLP17858 780 aa16.02■□□□□ 0.16
XRCC1-209ENST00000599693 MRPS21P82921 87 aaKnown RBP16.02■□□□□ 0.16
XRCC1-209ENST00000599693 ZNF720Q7Z2F6 126 aa16.02■□□□□ 0.16
XRCC1-209ENST00000599693 SFR1Q86XK3 245 aa16.02■□□□□ 0.16
XRCC1-209ENST00000599693 ADGRF2Q8IZF7 708 aa16.02■□□□□ 0.16
XRCC1-209ENST00000599693 KRI1Q8N9T8 703 aaKnown RBP16.02■□□□□ 0.16
XRCC1-209ENST00000599693 CXorf38Q8TB03 319 aa16.02■□□□□ 0.16
XRCC1-209ENST00000599693 CACTINQ8WUQ7 758 aaKnown RBP16.02■□□□□ 0.16
XRCC1-209ENST00000599693 SPACA7Q96KW9 195 aa16.02■□□□□ 0.16
XRCC1-209ENST00000599693 KIF2CQ99661 725 aa16.02■□□□□ 0.16
XRCC1-209ENST00000599693 ITGA11Q9UKX5 1188 aa16.02■□□□□ 0.16
XRCC1-209ENST00000599693 NBEAQ8NFP9 2946 aa16.02■□□□□ 0.15
XRCC1-209ENST00000599693 FREM2Q5SZK8 3169 aa16.01■□□□□ 0.15
XRCC1-209ENST00000599693 GABRDO14764 452 aa16.01■□□□□ 0.15
XRCC1-209ENST00000599693 CYP17A1P05093 508 aa16.01■□□□□ 0.15
XRCC1-209ENST00000599693 HNRNPLP14866 589 aaKnown RBP eCLIP16.01■□□□□ 0.15
XRCC1-209ENST00000599693 LONP1P36776 959 aaKnown RBP16.01■□□□□ 0.15
XRCC1-209ENST00000599693 P2RY2P41231 377 aa16.01■□□□□ 0.15
XRCC1-209ENST00000599693 LHX1P48742 406 aa16.01■□□□□ 0.15
XRCC1-209ENST00000599693 ZXDBP98169 803 aa16.01■□□□□ 0.15
XRCC1-209ENST00000599693 TRIM61Q5EBN2 209 aa16.01■□□□□ 0.15
XRCC1-209ENST00000599693 TMEM92Q6UXU6 159 aa16.01■□□□□ 0.15
XRCC1-209ENST00000599693 LPCAT2Q7L5N7 544 aa16.01■□□□□ 0.15
XRCC1-209ENST00000599693 TTC30AQ86WT1 665 aa16.01■□□□□ 0.15
XRCC1-209ENST00000599693 CSGALNACT2Q8N6G5 542 aa16.01■□□□□ 0.15
XRCC1-209ENST00000599693 TOP6BLQ8N6T0 577 aa16.01■□□□□ 0.15
XRCC1-209ENST00000599693 KIAA1958Q8N8K9 716 aa16.01■□□□□ 0.15
XRCC1-209ENST00000599693 WHAMMQ8TF30 809 aa16.01■□□□□ 0.15
XRCC1-209ENST00000599693 ZCCHC14Q8WYQ9 949 aaKnown RBP16.01■□□□□ 0.15
XRCC1-209ENST00000599693 SPATA17Q96L03 361 aa16.01■□□□□ 0.15
XRCC1-209ENST00000599693 STRA6Q9BX79 667 aa16.01■□□□□ 0.15
XRCC1-209ENST00000599693 NUSAP1Q9BXS6 441 aaKnown RBP16.01■□□□□ 0.15
XRCC1-209ENST00000599693 RBAKQ9NYW8 714 aaPredicted RBP16.01■□□□□ 0.15
XRCC1-209ENST00000599693 NEUROG3Q9Y4Z2 214 aa16.01■□□□□ 0.15
XRCC1-209ENST00000599693 SNX9Q9Y5X1 595 aa16.01■□□□□ 0.15
XRCC1-209ENST00000599693 H3BQV1 296 aa16■□□□□ 0.15
XRCC1-209ENST00000599693 LEFTY2O00292 366 aa16■□□□□ 0.15
XRCC1-209ENST00000599693 TULP1O00294 542 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms