RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 SHDQ96IW2 340 aa23.8■■□□□ 1.4
GTF2F1-204ENST00000594965 SPATA17Q96L03 361 aa23.8■■□□□ 1.4
GTF2F1-204ENST00000594965 B3GNT5Q9BYG0 378 aa23.8■■□□□ 1.4
GTF2F1-204ENST00000594965 APOBEC3GQ9HC16 384 aaKnown RBP23.8■■□□□ 1.4
GTF2F1-204ENST00000594965 TRPV5Q9NQA5 729 aa23.8■■□□□ 1.4
GTF2F1-204ENST00000594965 TMEM30AQ9NV96 361 aa23.8■■□□□ 1.4
GTF2F1-204ENST00000594965 DLGAP2Q9P1A6 1054 aa23.8■■□□□ 1.4
GTF2F1-204ENST00000594965 KANSL1LA0AUZ9 987 aa23.79■■□□□ 1.4
GTF2F1-204ENST00000594965 CETN3O15182 167 aa23.79■■□□□ 1.4
GTF2F1-204ENST00000594965 RFX1P22670 979 aa23.79■■□□□ 1.4
GTF2F1-204ENST00000594965 GRIK1P39086 918 aa23.79■■□□□ 1.4
GTF2F1-204ENST00000594965 ASPAP45381 313 aa23.79■■□□□ 1.4
GTF2F1-204ENST00000594965 TXNDC8Q6A555 127 aa23.79■■□□□ 1.4
GTF2F1-204ENST00000594965 MAB21L3Q8N8X9 362 aa23.79■■□□□ 1.4
GTF2F1-204ENST00000594965 PJA1Q8NG27 643 aa23.79■■□□□ 1.4
GTF2F1-204ENST00000594965 IRF7Q92985 503 aa23.79■■□□□ 1.4
GTF2F1-204ENST00000594965 ZNF518BQ9C0D4 1074 aa23.79■■□□□ 1.4
GTF2F1-204ENST00000594965 SMG9Q9H0W8 520 aaKnown RBP23.79■■□□□ 1.4
GTF2F1-204ENST00000594965 MMRN2Q9H8L6 949 aa23.79■■□□□ 1.4
GTF2F1-204ENST00000594965 TMEM8AQ9HCN3 771 aa23.79■■□□□ 1.4
GTF2F1-204ENST00000594965 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.79■■□□□ 1.42e-10■■■■■ 72.1
GTF2F1-204ENST00000594965 OBP2AQ9NY56 170 aa23.79■■□□□ 1.4
GTF2F1-204ENST00000594965 MTF2Q9Y483 593 aaPredicted RBP23.79■■□□□ 1.4
GTF2F1-204ENST00000594965 CLDN5O00501 218 aa23.78■■□□□ 1.4
GTF2F1-204ENST00000594965 CLSTN1O94985 981 aa23.78■■□□□ 1.4
GTF2F1-204ENST00000594965 DCNP07585 359 aaKnown RBP23.78■■□□□ 1.4
GTF2F1-204ENST00000594965 GLULP15104 373 aa23.78■■□□□ 1.4
GTF2F1-204ENST00000594965 CD72P21854 359 aa23.78■■□□□ 1.4
GTF2F1-204ENST00000594965 USP46P62068 366 aa23.78■■□□□ 1.4
GTF2F1-204ENST00000594965 TPRG1Q6ZUI0 275 aa23.78■■□□□ 1.4
GTF2F1-204ENST00000594965 CMTM8Q8IZV2 173 aa23.78■■□□□ 1.4
GTF2F1-204ENST00000594965 DTWD2Q8NBA8 298 aa23.78■■□□□ 1.4
GTF2F1-204ENST00000594965 BCO2Q9BYV7 579 aa23.78■■□□□ 1.4
GTF2F1-204ENST00000594965 GTPBP4Q9BZE4 634 aaKnown RBP23.78■■□□□ 1.4
GTF2F1-204ENST00000594965 UXTQ9UBK9 157 aaPredicted RBP23.78■■□□□ 1.4
GTF2F1-204ENST00000594965 HMGXB4Q9UGU5 601 aa23.78■■□□□ 1.4
GTF2F1-204ENST00000594965 ZMYM5Q9UJ78 669 aa23.78■■□□□ 1.4
GTF2F1-204ENST00000594965 SIT1Q9Y3P8 196 aa23.78■■□□□ 1.4
GTF2F1-204ENST00000594965 SOBPA7XYQ1 873 aa23.77■■□□□ 1.4
GTF2F1-204ENST00000594965 F8VP50 259 aa23.77■■□□□ 1.4
GTF2F1-204ENST00000594965 H0Y858 1186 aa23.77■■□□□ 1.4
GTF2F1-204ENST00000594965 ZNF263O14978 683 aa23.77■■□□□ 1.4
GTF2F1-204ENST00000594965 TRIM66O15016 1216 aa23.77■■□□□ 1.4
GTF2F1-204ENST00000594965 CHADO15335 359 aa23.77■■□□□ 1.4
GTF2F1-204ENST00000594965 EPB41P11171 864 aaKnown RBP23.77■■□□□ 1.4
GTF2F1-204ENST00000594965 CCNE1P24864 410 aa23.77■■□□□ 1.4
GTF2F1-204ENST00000594965 DDX6P26196 483 aaKnown RBP eCLIP23.77■■□□□ 1.4
GTF2F1-204ENST00000594965 FKBP3Q00688 224 aaKnown RBP23.77■■□□□ 1.4
GTF2F1-204ENST00000594965 PAQR9Q6ZVX9 377 aa23.77■■□□□ 1.4
GTF2F1-204ENST00000594965 MON1AQ86VX9 555 aa23.77■■□□□ 1.4
GTF2F1-204ENST00000594965 C8orf48Q96LL4 319 aa23.77■■□□□ 1.4
GTF2F1-204ENST00000594965 CEP295NLQ96MC4 621 aa23.77■■□□□ 1.4
GTF2F1-204ENST00000594965 PHOX2BQ99453 314 aa23.77■■□□□ 1.4
GTF2F1-204ENST00000594965 TSG101Q99816 390 aa23.77■■□□□ 1.4
GTF2F1-204ENST00000594965 LTB4R2Q9NPC1 389 aa23.77■■□□□ 1.4
GTF2F1-204ENST00000594965 PPP1R3GB7ZBB8 358 aa23.76■■□□□ 1.39
GTF2F1-204ENST00000594965 P4HA1P13674 534 aa23.76■■□□□ 1.39
GTF2F1-204ENST00000594965 GTF2H1P32780 548 aa23.76■■□□□ 1.39
GTF2F1-204ENST00000594965 NOP14P78316 857 aaKnown RBP23.76■■□□□ 1.39
GTF2F1-204ENST00000594965 LRRC63Q05C16 580 aa23.76■■□□□ 1.39
GTF2F1-204ENST00000594965 MORC3Q14149 939 aa23.76■■□□□ 1.39
GTF2F1-204ENST00000594965 KRT39Q6A163 491 aa23.76■■□□□ 1.39
GTF2F1-204ENST00000594965 DENND5BQ6ZUT9 1274 aa23.76■■□□□ 1.39
GTF2F1-204ENST00000594965 MRPS31Q92665 395 aaKnown RBP23.76■■□□□ 1.39
GTF2F1-204ENST00000594965 SEMA4DQ92854 862 aa23.76■■□□□ 1.39
GTF2F1-204ENST00000594965 USP13Q92995 863 aaPredicted RBP23.76■■□□□ 1.39
GTF2F1-204ENST00000594965 DHTKD1Q96HY7 919 aaPredicted RBP23.76■■□□□ 1.39
GTF2F1-204ENST00000594965 ELOVL4Q9GZR5 314 aa23.76■■□□□ 1.39
GTF2F1-204ENST00000594965 CCL26Q9Y258 94 aa23.76■■□□□ 1.39
GTF2F1-204ENST00000594965 DPYSL4O14531 572 aa23.75■■□□□ 1.39
GTF2F1-204ENST00000594965 SLC16A3O15427 465 aaKnown RBP23.75■■□□□ 1.39
GTF2F1-204ENST00000594965 TARSP26639 723 aaKnown RBP23.75■■□□□ 1.39
GTF2F1-204ENST00000594965 ANXA13P27216 316 aa23.75■■□□□ 1.39
GTF2F1-204ENST00000594965 NDST1P52848 882 aa23.75■■□□□ 1.39
GTF2F1-204ENST00000594965 UBE2HP62256 183 aa23.75■■□□□ 1.39
GTF2F1-204ENST00000594965 ORC1Q13415 861 aa23.75■■□□□ 1.39
GTF2F1-204ENST00000594965 ACOT1Q86TX2 421 aa23.75■■□□□ 1.39
GTF2F1-204ENST00000594965 YAF2Q8IY57 180 aa23.75■■□□□ 1.39
GTF2F1-204ENST00000594965 CRYBG2Q8N1P7 616 aa23.75■■□□□ 1.39
GTF2F1-204ENST00000594965 RIN3Q8TB24 985 aa23.75■■□□□ 1.39
GTF2F1-204ENST00000594965 BPIFB1Q8TDL5 484 aa23.75■■□□□ 1.39
GTF2F1-204ENST00000594965 ZFYVE19Q96K21 471 aa23.75■■□□□ 1.39
GTF2F1-204ENST00000594965 TWNKQ96RR1 684 aa23.75■■□□□ 1.39
GTF2F1-204ENST00000594965 SLC22A12Q96S37 553 aa23.75■■□□□ 1.39
GTF2F1-204ENST00000594965 TTLL2Q9BWV7 592 aa23.75■■□□□ 1.39
GTF2F1-204ENST00000594965 INCA1Q0VD86 236 aa23.74■■□□□ 1.39
GTF2F1-204ENST00000594965 FZD5Q13467 585 aa23.74■■□□□ 1.39
GTF2F1-204ENST00000594965 UBXN2BQ14CS0 331 aa23.74■■□□□ 1.39
GTF2F1-204ENST00000594965 UNC93AQ86WB7 457 aa23.74■■□□□ 1.39
GTF2F1-204ENST00000594965 FUKQ8N0W3 1084 aa23.74■■□□□ 1.39
GTF2F1-204ENST00000594965 ZNF687Q8N1G0 1237 aa23.74■■□□□ 1.39
GTF2F1-204ENST00000594965 CELF5Q8N6W0 485 aaKnown RBP23.74■■□□□ 1.39
GTF2F1-204ENST00000594965 TNIP3Q96KP6 325 aa23.74■■□□□ 1.39
GTF2F1-204ENST00000594965 KCNK16Q96T55 309 aa23.74■■□□□ 1.39
GTF2F1-204ENST00000594965 DUSP9Q99956 384 aaKnown RBP23.74■■□□□ 1.39
GTF2F1-204ENST00000594965 OSBPL6Q9BZF3 934 aa23.74■■□□□ 1.39
GTF2F1-204ENST00000594965 FAM86C1Q9NVL1 165 aa23.74■■□□□ 1.39
GTF2F1-204ENST00000594965 FAM170BA6NMN3 283 aa23.73■■□□□ 1.39
GTF2F1-204ENST00000594965 BIN1O00499 593 aa23.73■■□□□ 1.39
GTF2F1-204ENST00000594965 PSMA7O14818 248 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms