RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 PNMA8AQ86V59 439 aaPredicted RBP20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 ARFGAP1Q8N6T3 406 aa20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 CMASQ8NFW8 434 aaPredicted RBP20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 KIF12Q96FN5 646 aa20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 PWWP2AQ96N64 755 aa20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 PHACTR1Q9C0D0 580 aa20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 ACTR5Q9H9F9 607 aaPredicted RBP20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 SAMD15Q9P1V8 674 aa20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 TJP2Q9UDY2 1190 aa20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 HMGXB4Q9UGU5 601 aa20.13■□□□□ 0.81
PRKCSH-209ENST00000589838 BTBD19C9JJ37 291 aa20.12■□□□□ 0.81
PRKCSH-209ENST00000589838 NDST1P52848 882 aa20.12■□□□□ 0.81
PRKCSH-209ENST00000589838 OTUD4Q01804 1114 aaKnown RBP20.12■□□□□ 0.81
PRKCSH-209ENST00000589838 ORC1Q13415 861 aa20.12■□□□□ 0.81
PRKCSH-209ENST00000589838 FAM102AQ5T9C2 384 aaPredicted RBP20.12■□□□□ 0.81
PRKCSH-209ENST00000589838 PRUNE1Q86TP1 453 aa20.12■□□□□ 0.81
PRKCSH-209ENST00000589838 HAUS1Q96CS2 278 aa20.12■□□□□ 0.81
PRKCSH-209ENST00000589838 ABHD16BQ9H3Z7 469 aa20.12■□□□□ 0.81
PRKCSH-209ENST00000589838 RSAD1Q9HA92 442 aa20.12■□□□□ 0.81
PRKCSH-209ENST00000589838 TMEM120BA0PK00 339 aa20.11■□□□□ 0.81
PRKCSH-209ENST00000589838 TRUB2O95900 331 aaKnown RBP20.11■□□□□ 0.81
PRKCSH-209ENST00000589838 MMP3P08254 477 aa20.11■□□□□ 0.81
PRKCSH-209ENST00000589838 ZSCAN5DPP0CG00 497 aa20.11■□□□□ 0.81
PRKCSH-209ENST00000589838 IL1R2P27930 398 aa20.11■□□□□ 0.81
PRKCSH-209ENST00000589838 ZNF143P52747 638 aaPredicted RBP20.11■□□□□ 0.81
PRKCSH-209ENST00000589838 SNX16P57768 344 aa20.11■□□□□ 0.81
PRKCSH-209ENST00000589838 RNASEH2BQ5TBB1 312 aaKnown RBP20.11■□□□□ 0.81
PRKCSH-209ENST00000589838 KIAA0319LQ8IZA0 1049 aa20.11■□□□□ 0.81
PRKCSH-209ENST00000589838 EMC1Q8N766 993 aa20.11■□□□□ 0.81
PRKCSH-209ENST00000589838 GLIS1Q8NBF1 620 aa20.11■□□□□ 0.81
PRKCSH-209ENST00000589838 OR6J1Q8NGC5 347 aa20.11■□□□□ 0.81
PRKCSH-209ENST00000589838 ACTL9Q8TC94 416 aa20.11■□□□□ 0.81
PRKCSH-209ENST00000589838 RSAD2Q8WXG1 361 aa20.11■□□□□ 0.81
PRKCSH-209ENST00000589838 UPF1Q92900 1129 aaKnown RBP eCLIP20.11■□□□□ 0.815e-15■■■■■ 62.2
PRKCSH-209ENST00000589838 SYT17Q9BSW7 474 aa20.11■□□□□ 0.81
PRKCSH-209ENST00000589838 CNPY3Q9BT09 278 aa20.11■□□□□ 0.81
PRKCSH-209ENST00000589838 TMEM121Q9BTD3 319 aa20.11■□□□□ 0.81
PRKCSH-209ENST00000589838 KCNK9Q9NPC2 374 aa20.11■□□□□ 0.81
PRKCSH-209ENST00000589838 USP18Q9UMW8 372 aa20.11■□□□□ 0.81
PRKCSH-209ENST00000589838 NAALADL1Q9UQQ1 740 aa20.11■□□□□ 0.81
PRKCSH-209ENST00000589838 GLTPD2A6NH11 291 aa20.11■□□□□ 0.81
PRKCSH-209ENST00000589838 ALOX15BO15296 676 aa20.11■□□□□ 0.81
PRKCSH-209ENST00000589838 IFNB1P01574 187 aa20.11■□□□□ 0.81
PRKCSH-209ENST00000589838 VIMP08670 466 aaKnown RBP20.11■□□□□ 0.81
PRKCSH-209ENST00000589838 PECAM1P16284 738 aaPredicted RBP20.11■□□□□ 0.81
PRKCSH-209ENST00000589838 GPD1P21695 349 aa20.11■□□□□ 0.81
PRKCSH-209ENST00000589838 MIPP30301 263 aa20.11■□□□□ 0.81
PRKCSH-209ENST00000589838 ITIH4Q14624 930 aa20.11■□□□□ 0.81
PRKCSH-209ENST00000589838 PCBP1Q15365 356 aaKnown RBP eCLIP20.11■□□□□ 0.811e-8■■■■□ 22
PRKCSH-209ENST00000589838 SMTNL2Q2TAL5 461 aa20.11■□□□□ 0.81
PRKCSH-209ENST00000589838 CYP4F22Q6NT55 531 aa20.11■□□□□ 0.81
PRKCSH-209ENST00000589838 PIGWQ7Z7B1 504 aa20.11■□□□□ 0.81
PRKCSH-209ENST00000589838 TDRPQ86YL5 185 aa20.11■□□□□ 0.81
PRKCSH-209ENST00000589838 RFX6Q8HWS3 928 aa20.11■□□□□ 0.81
PRKCSH-209ENST00000589838 MS4A4AQ96JQ5 239 aa20.11■□□□□ 0.81
PRKCSH-209ENST00000589838 GCOM2Q9BZD3 368 aaPredicted RBP20.11■□□□□ 0.81
PRKCSH-209ENST00000589838 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.1■□□□□ 0.81
PRKCSH-209ENST00000589838 ETS1P14921 441 aa20.1■□□□□ 0.81
PRKCSH-209ENST00000589838 BRAFP15056 766 aa20.1■□□□□ 0.81
PRKCSH-209ENST00000589838 SMPD1P17405 629 aa20.1■□□□□ 0.81
PRKCSH-209ENST00000589838 DESP17661 470 aa20.1■□□□□ 0.81
PRKCSH-209ENST00000589838 DYNLT1P63172 113 aa20.1■□□□□ 0.81
PRKCSH-209ENST00000589838 GRB14Q14449 540 aa20.1■□□□□ 0.81
PRKCSH-209ENST00000589838 MARCH8Q5T0T0 291 aa20.1■□□□□ 0.81
PRKCSH-209ENST00000589838 ARHGEF18Q6ZSZ5 1173 aa20.1■□□□□ 0.81
PRKCSH-209ENST00000589838 GPR142Q7Z601 462 aa20.1■□□□□ 0.81
PRKCSH-209ENST00000589838 PPIL6Q8IXY8 311 aa20.1■□□□□ 0.81
PRKCSH-209ENST00000589838 CCDC13Q8IYE1 715 aa20.1■□□□□ 0.81
PRKCSH-209ENST00000589838 LRRC34Q8IZ02 419 aa20.1■□□□□ 0.81
PRKCSH-209ENST00000589838 UBA3Q8TBC4 463 aa20.1■□□□□ 0.81
PRKCSH-209ENST00000589838 MAML3Q96JK9 1138 aa20.1■□□□□ 0.81
PRKCSH-209ENST00000589838 NCAPGQ9BPX3 1015 aa20.1■□□□□ 0.81
PRKCSH-209ENST00000589838 MAK16Q9BXY0 300 aaKnown RBP20.1■□□□□ 0.81
PRKCSH-209ENST00000589838 NKIRAS1Q9NYS0 192 aa20.1■□□□□ 0.81
PRKCSH-209ENST00000589838 PCSK1NQ9UHG2 260 aa20.1■□□□□ 0.81
PRKCSH-209ENST00000589838 RALGAPA2Q2PPJ7 1873 aa20.1■□□□□ 0.81
PRKCSH-209ENST00000589838 EXOC1LA0A1B0GW35 172 aa20.09■□□□□ 0.81
PRKCSH-209ENST00000589838 APOC4-APOC2K7ER74 178 aa20.09■□□□□ 0.81
PRKCSH-209ENST00000589838 APOC2P02655 101 aa20.09■□□□□ 0.81
PRKCSH-209ENST00000589838 SETSIPP0DME0 302 aa20.09■□□□□ 0.81
PRKCSH-209ENST00000589838 YARSP54577 528 aaKnown RBP20.09■□□□□ 0.81
PRKCSH-209ENST00000589838 ACVR2BQ13705 512 aa20.09■□□□□ 0.81
PRKCSH-209ENST00000589838 CCDC142Q17RM4 750 aa20.09■□□□□ 0.81
PRKCSH-209ENST00000589838 KCNT1Q5JUK3 1230 aa20.09■□□□□ 0.81
PRKCSH-209ENST00000589838 MAP1SQ66K74 1059 aaPredicted RBP20.09■□□□□ 0.81
PRKCSH-209ENST00000589838 OR6B2Q6IFH4 312 aa20.09■□□□□ 0.81
PRKCSH-209ENST00000589838 VSTM1Q6UX27 236 aa20.09■□□□□ 0.81
PRKCSH-209ENST00000589838 PPP1R21Q6ZMI0 780 aa20.09■□□□□ 0.81
PRKCSH-209ENST00000589838 KDM4CQ9H3R0 1056 aa20.09■□□□□ 0.81
PRKCSH-209ENST00000589838 UBN1Q9NPG3 1134 aa20.09■□□□□ 0.81
PRKCSH-209ENST00000589838 SLC5A4Q9NY91 659 aa20.09■□□□□ 0.81
PRKCSH-209ENST00000589838 IFNAR2P48551 515 aa20.09■□□□□ 0.81
PRKCSH-209ENST00000589838 TFDP2Q14188 446 aa20.09■□□□□ 0.81
PRKCSH-209ENST00000589838 FAM47CQ5HY64 1035 aa20.09■□□□□ 0.81
PRKCSH-209ENST00000589838 SLC27A1Q6PCB7 646 aa20.09■□□□□ 0.81
PRKCSH-209ENST00000589838 DPH6Q7L8W6 267 aa20.09■□□□□ 0.81
PRKCSH-209ENST00000589838 PLEKHH3Q7Z736 793 aa20.09■□□□□ 0.81
PRKCSH-209ENST00000589838 PRCCQ92733 491 aaPredicted RBP20.09■□□□□ 0.81
PRKCSH-209ENST00000589838 TINF2Q9BSI4 451 aa20.09■□□□□ 0.81
PRKCSH-209ENST00000589838 CTNNAL1Q9UBT7 734 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms