RNA–Protein interactions for RNA: ENST00000578681.5

DDX42-208, Transcript of DEAD-box helicase 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX42, Length 4,337 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-208ENST00000578681 TPX2Q9ULW0 747 aaKnown RBP17.41■□□□□ 0.38
DDX42-208ENST00000578681 LTBP3Q9NS15 1303 aa17.41■□□□□ 0.38
DDX42-208ENST00000578681 MSH2P43246 934 aa17.41■□□□□ 0.38
DDX42-208ENST00000578681 TFDP3Q5H9I0 405 aa17.41■□□□□ 0.38
DDX42-208ENST00000578681 CEP128Q6ZU80 1094 aa17.41■□□□□ 0.38
DDX42-208ENST00000578681 SIX6OS1Q8N1H7 587 aa17.41■□□□□ 0.38
DDX42-208ENST00000578681 XPO6Q96QU8 1125 aaKnown RBP17.41■□□□□ 0.38
DDX42-208ENST00000578681 TCP11X1B4DZS4 312 aa17.41■□□□□ 0.38
DDX42-208ENST00000578681 KCNN4O15554 427 aa17.41■□□□□ 0.38
DDX42-208ENST00000578681 HIF1AQ16665 826 aa17.41■□□□□ 0.38
DDX42-208ENST00000578681 PTPN20Q4JDL3 420 aa17.41■□□□□ 0.38
DDX42-208ENST00000578681 C1orf127Q8N9H9 656 aa17.41■□□□□ 0.38
DDX42-208ENST00000578681 CHMP2BQ9UQN3 213 aa17.41■□□□□ 0.38
DDX42-208ENST00000578681 TIMM13Q9Y5L4 95 aaPredicted RBP17.41■□□□□ 0.38
DDX42-208ENST00000578681 MRPL42Q9Y6G3 142 aaKnown RBP17.41■□□□□ 0.38
DDX42-208ENST00000578681 INHBAP08476 426 aa17.4■□□□□ 0.38
DDX42-208ENST00000578681 RAB6BQ9NRW1 208 aa17.4■□□□□ 0.38
DDX42-208ENST00000578681 CPSF3Q9UKF6 684 aaKnown RBP17.4■□□□□ 0.38
DDX42-208ENST00000578681 ADAMTS5Q9UNA0 930 aa17.4■□□□□ 0.38
DDX42-208ENST00000578681 E5RJQ4 531 aa17.4■□□□□ 0.38
DDX42-208ENST00000578681 XPOTO43592 962 aaKnown RBP17.4■□□□□ 0.38
DDX42-208ENST00000578681 BANF1O75531 89 aa17.4■□□□□ 0.38
DDX42-208ENST00000578681 STBD1O95210 358 aa17.4■□□□□ 0.38
DDX42-208ENST00000578681 ACAT1P24752 427 aaKnown RBP17.4■□□□□ 0.38
DDX42-208ENST00000578681 AGBL2Q5U5Z8 902 aa17.4■□□□□ 0.38
DDX42-208ENST00000578681 TXNRD3NBQ6F5E7 133 aa17.4■□□□□ 0.38
DDX42-208ENST00000578681 MON1BQ7L1V2 547 aa17.4■□□□□ 0.38
DDX42-208ENST00000578681 DDX1Q92499 740 aaKnown RBP17.4■□□□□ 0.38
DDX42-208ENST00000578681 ETAA1Q9NY74 926 aa17.4■□□□□ 0.38
DDX42-208ENST00000578681 APRTP07741 180 aa17.4■□□□□ 0.38
DDX42-208ENST00000578681 MMP8P22894 467 aa17.4■□□□□ 0.38
DDX42-208ENST00000578681 ARL4CP56559 192 aa17.4■□□□□ 0.38
DDX42-208ENST00000578681 LRRC23Q53EV4 343 aaPredicted RBP17.4■□□□□ 0.38
DDX42-208ENST00000578681 GPR142Q7Z601 462 aa17.4■□□□□ 0.38
DDX42-208ENST00000578681 NETO2Q8NC67 525 aa17.4■□□□□ 0.38
DDX42-208ENST00000578681 HMGXB4Q9UGU5 601 aa17.4■□□□□ 0.38
DDX42-208ENST00000578681 SMIM24O75264 130 aa17.4■□□□□ 0.38
DDX42-208ENST00000578681 CCNG2Q16589 344 aa17.4■□□□□ 0.38
DDX42-208ENST00000578681 TRMT10CQ7L0Y3 403 aaKnown RBP17.4■□□□□ 0.38
DDX42-208ENST00000578681 MIEF2Q96C03 454 aa17.4■□□□□ 0.38
DDX42-208ENST00000578681 CPXM1Q96SM3 734 aa17.4■□□□□ 0.38
DDX42-208ENST00000578681 TINF2Q9BSI4 451 aa17.4■□□□□ 0.38
DDX42-208ENST00000578681 PCYOX1Q9UHG3 505 aa17.4■□□□□ 0.38
DDX42-208ENST00000578681 TNFSF13BQ9Y275 285 aa17.4■□□□□ 0.38
DDX42-208ENST00000578681 TAP1Q03518 808 aa17.39■□□□□ 0.37
DDX42-208ENST00000578681 PRM3Q9NNZ6 103 aa17.39■□□□□ 0.37
DDX42-208ENST00000578681 USP18Q9UMW8 372 aa17.39■□□□□ 0.37
DDX42-208ENST00000578681 GPD1P21695 349 aa17.39■□□□□ 0.37
DDX42-208ENST00000578681 ROR1Q01973 937 aa17.39■□□□□ 0.37
DDX42-208ENST00000578681 MREGQ8N565 214 aa17.39■□□□□ 0.37
DDX42-208ENST00000578681 TMEM165Q9HC07 324 aa17.39■□□□□ 0.37
DDX42-208ENST00000578681 FSCN2O14926 492 aa17.39■□□□□ 0.37
DDX42-208ENST00000578681 YBX3P16989 372 aaKnown RBP eCLIP17.39■□□□□ 0.375e-7■□□□□ 8.5
DDX42-208ENST00000578681 MIPP30301 263 aa17.39■□□□□ 0.37
DDX42-208ENST00000578681 ARL4AP40617 200 aa17.39■□□□□ 0.37
DDX42-208ENST00000578681 CTCFP49711 727 aaPredicted RBP17.39■□□□□ 0.37
DDX42-208ENST00000578681 CAV1Q03135 178 aa17.39■□□□□ 0.37
DDX42-208ENST00000578681 MMRN1Q13201 1228 aa17.39■□□□□ 0.37
DDX42-208ENST00000578681 NOTUMQ6P988 496 aa17.39■□□□□ 0.37
DDX42-208ENST00000578681 CCHCR1Q8TD31 782 aa17.39■□□□□ 0.37
DDX42-208ENST00000578681 AGTP01019 485 aa17.38■□□□□ 0.37
DDX42-208ENST00000578681 TFDP2Q14188 446 aa17.38■□□□□ 0.37
DDX42-208ENST00000578681 MSL3Q8N5Y2 521 aaKnown RBP17.38■□□□□ 0.37
DDX42-208ENST00000578681 LRRC8CQ8TDW0 803 aa17.38■□□□□ 0.37
DDX42-208ENST00000578681 ABHD16BQ9H3Z7 469 aa17.38■□□□□ 0.37
DDX42-208ENST00000578681 GOLGA2P5Q9HBQ8 144 aa17.38■□□□□ 0.37
DDX42-208ENST00000578681 GNL1P36915 607 aaPredicted RBP17.38■□□□□ 0.37
DDX42-208ENST00000578681 MCL1Q07820 350 aa17.38■□□□□ 0.37
DDX42-208ENST00000578681 ARHGEF18Q6ZSZ5 1173 aa17.38■□□□□ 0.37
DDX42-208ENST00000578681 PPM1NQ8N819 430 aa17.38■□□□□ 0.37
DDX42-208ENST00000578681 TTC13Q8NBP0 860 aa17.38■□□□□ 0.37
DDX42-208ENST00000578681 C18orf25Q96B23 403 aaPredicted RBP17.38■□□□□ 0.37
DDX42-208ENST00000578681 FGFR1OP2Q9NVK5 253 aa17.38■□□□□ 0.37
DDX42-208ENST00000578681 KLHL14Q9P2G3 628 aa17.38■□□□□ 0.37
DDX42-208ENST00000578681 WDR35Q9P2L0 1181 aa17.38■□□□□ 0.37
DDX42-208ENST00000578681 PECAM1P16284 738 aaPredicted RBP17.38■□□□□ 0.37
DDX42-208ENST00000578681 SAT1P21673 171 aa17.38■□□□□ 0.37
DDX42-208ENST00000578681 IL9RQ01113 521 aa17.38■□□□□ 0.37
DDX42-208ENST00000578681 SETDB1Q15047 1291 aa17.38■□□□□ 0.37
DDX42-208ENST00000578681 NPNTQ6UXI9 565 aa17.38■□□□□ 0.37
DDX42-208ENST00000578681 VCPIP1Q96JH7 1222 aa17.38■□□□□ 0.37
DDX42-208ENST00000578681 LPIN3Q9BQK8 851 aa17.38■□□□□ 0.37
DDX42-208ENST00000578681 PDLIM7Q9NR12 457 aa17.38■□□□□ 0.37
DDX42-208ENST00000578681 MCF2P10911 925 aa17.38■□□□□ 0.37
DDX42-208ENST00000578681 MTHFD1LQ6UB35 978 aa17.38■□□□□ 0.37
DDX42-208ENST00000578681 C3orf62Q6ZUJ4 267 aa17.38■□□□□ 0.37
DDX42-208ENST00000578681 PHF13Q86YI8 300 aaPredicted RBP17.38■□□□□ 0.37
DDX42-208ENST00000578681 LRRC34Q8IZ02 419 aa17.38■□□□□ 0.37
DDX42-208ENST00000578681 VTA1Q9NP79 307 aa17.38■□□□□ 0.37
DDX42-208ENST00000578681 XPO7Q9UIA9 1087 aaKnown RBP17.38■□□□□ 0.37
DDX42-208ENST00000578681 PPFIA2O75334 1257 aa17.37■□□□□ 0.37
DDX42-208ENST00000578681 LSM8O95777 96 aaKnown RBP17.37■□□□□ 0.37
DDX42-208ENST00000578681 TTC4O95801 387 aa17.37■□□□□ 0.37
DDX42-208ENST00000578681 FAM107AO95990 144 aa17.37■□□□□ 0.37
DDX42-208ENST00000578681 VDRP11473 427 aa17.37■□□□□ 0.37
DDX42-208ENST00000578681 ACO1P21399 889 aaKnown RBP17.37■□□□□ 0.37
DDX42-208ENST00000578681 NUMBP49757 651 aa17.37■□□□□ 0.37
DDX42-208ENST00000578681 MBTD1Q05BQ5 628 aa17.37■□□□□ 0.37
DDX42-208ENST00000578681 DCAF6Q58WW2 860 aa17.37■□□□□ 0.37
DDX42-208ENST00000578681 FAM172AQ8WUF8 416 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms