RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 ZBTB45Q96K62 511 aaPredicted RBP5.67□□□□□ -1.5
VAPA-203ENST00000577539 PWWP2AQ96N64 755 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 WRNIP1Q96S55 665 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 PRMT1Q99873 361 aaKnown RBP5.67□□□□□ -1.5
VAPA-203ENST00000577539 STMN4Q9H169 189 aaPredicted RBP5.67□□□□□ -1.5
VAPA-203ENST00000577539 ATP6V0A4Q9HBG4 840 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 ADAM22Q9P0K1 906 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 KLF15Q9UIH9 416 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 WASF2Q9Y6W5 498 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 ATP8B3O60423 1300 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 K7ERI5 159 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 ATE1O95260 518 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 LYPLA2O95372 231 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 PCSK2P16519 638 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 CD58P19256 250 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 GBP1P32455 592 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 GBP2P32456 591 aaPredicted RBP5.67□□□□□ -1.5
VAPA-203ENST00000577539 GPC3P51654 580 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 FOXC1Q12948 553 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 GNASQ5JWF2 1037 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 HP1BP3Q5SSJ5 553 aaPredicted RBP5.67□□□□□ -1.5
VAPA-203ENST00000577539 FKBP1CQ5VVH2 108 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 TAOK1Q7L7X3 1001 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 EEPD1Q7L9B9 569 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 CCDC60Q8IWA6 550 aaPredicted RBP5.67□□□□□ -1.5
VAPA-203ENST00000577539 TAB3Q8N5C8 712 aaPredicted RBP5.67□□□□□ -1.5
VAPA-203ENST00000577539 NSUN6Q8TEA1 469 aaKnown RBP5.67□□□□□ -1.5
VAPA-203ENST00000577539 IPO4Q8TEX9 1081 aaKnown RBP5.67□□□□□ -1.5
VAPA-203ENST00000577539 ZNF668Q96K58 619 aaPredicted RBP5.67□□□□□ -1.5
VAPA-203ENST00000577539 RUNDC3BQ96NL0 473 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 TIPINQ9BVW5 301 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 TARS2Q9BW92 718 aaKnown RBP5.67□□□□□ -1.5
VAPA-203ENST00000577539 IMPG2Q9BZV3 1241 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 DEFB129Q9H1M3 183 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 CDC42EP4Q9H3Q1 356 aaKnown RBP5.67□□□□□ -1.5
VAPA-203ENST00000577539 EFCC1Q9HA90 598 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 JPH1Q9HDC5 661 aaPredicted RBP5.67□□□□□ -1.5
VAPA-203ENST00000577539 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.67□□□□□ -1.5
VAPA-203ENST00000577539 SLC9A2Q9UBY0 812 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 ANAPC5Q9UJX4 755 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 AGO2Q9UKV8 859 aaKnown RBP5.67□□□□□ -1.5
VAPA-203ENST00000577539 FNDC3AQ9Y2H6 1198 aaKnown RBP5.67□□□□□ -1.5
VAPA-203ENST00000577539 FOCADQ5VW36 1801 aa5.67□□□□□ -1.5
VAPA-203ENST00000577539 ADGRA3Q8IWK6 1321 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 RPTORQ8N122 1335 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 FOXO6A8MYZ6 492 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 VWA5AO00534 786 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 RIPK2O43353 540 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 ADCY3O60266 1144 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 DGAT1O75907 488 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 MAP3K6O95382 1288 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 CYP1A2P05177 515 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 RALAP11233 206 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 BMP1P13497 986 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 RXRBP28702 533 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 ACTR2P61160 394 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 HIF1AQ16665 826 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 CLEC16AQ2KHT3 1053 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 ZNF423Q2M1K9 1284 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 GNPTABQ3T906 1256 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 SLC39A4Q6P5W5 647 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 RINLQ6ZS11 566 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 PRUNE1Q86TP1 453 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 CEP57Q86XR8 500 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 CCDC13Q8IYE1 715 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 LRRC34Q8IZ02 419 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 GDAP1Q8TB36 358 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 SEC14L1Q92503 715 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 ARHGEF2Q92974 986 aaKnown RBP5.66□□□□□ -1.5
VAPA-203ENST00000577539 HAUS1Q96CS2 278 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 C9orf72Q96LT7 481 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 MSTO1Q9BUK6 570 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 PCYOX1Q9UHG3 505 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 LRRC37AA6NMS7 1700 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 BNIP3LO60238 219 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 IFNB1P01574 187 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 RARGP13631 454 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 CTNNA2P26232 953 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 ITGA8P53708 1063 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 DRG2P55039 364 aaKnown RBP5.66□□□□□ -1.5
VAPA-203ENST00000577539 NLRP11P59045 1033 aaKnown RBP5.66□□□□□ -1.5
VAPA-203ENST00000577539 SNRPFP62306 86 aaKnown RBP5.66□□□□□ -1.5
VAPA-203ENST00000577539 FAM133BQ5BKY9 247 aaKnown RBP5.66□□□□□ -1.5
VAPA-203ENST00000577539 DCUN1D2Q6PH85 259 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 SPATC1Q76KD6 591 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 LYSMD3Q7Z3D4 306 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 VSIG10LQ86VR7 867 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 MCOLN2Q8IZK6 566 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.66□□□□□ -1.5
VAPA-203ENST00000577539 FAM129AQ9BZQ8 928 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 CYP26B1Q9NR63 512 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 HOMER3Q9NSC5 361 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 RBAKQ9NYW8 714 aaPredicted RBP5.66□□□□□ -1.5
VAPA-203ENST00000577539 PCDHB2Q9Y5E7 798 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 LTBP1Q14766 1721 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 O00370 1275 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 TLR3O15455 904 aaKnown RBP5.66□□□□□ -1.5
VAPA-203ENST00000577539 AGTP01019 485 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 NUDT17P0C025 328 aa5.66□□□□□ -1.5
VAPA-203ENST00000577539 CHKAP35790 457 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms