RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 FMR1NBQ8N0W7 255 aaPredicted RBP15.65■□□□□ 0.1
FANCA-220ENST00000566409 CELF5Q8N6W0 485 aaKnown RBP15.65■□□□□ 0.1
FANCA-220ENST00000566409 OR6B3Q8NGW1 331 aa15.65■□□□□ 0.1
FANCA-220ENST00000566409 TTC8Q8TAM2 541 aa15.65■□□□□ 0.1
FANCA-220ENST00000566409 BPIFB1Q8TDL5 484 aa15.65■□□□□ 0.1
FANCA-220ENST00000566409 FAM3CQ92520 227 aa15.65■□□□□ 0.1
FANCA-220ENST00000566409 SLC22A12Q96S37 553 aa15.65■□□□□ 0.1
FANCA-220ENST00000566409 SDCBP2Q9H190 292 aa15.65■□□□□ 0.1
FANCA-220ENST00000566409 SNX25Q9H3E2 840 aa15.65■□□□□ 0.1
FANCA-220ENST00000566409 SMYD3Q9H7B4 428 aa15.65■□□□□ 0.1
FANCA-220ENST00000566409 SPATA6Q9NWH7 488 aaPredicted RBP15.65■□□□□ 0.1
FANCA-220ENST00000566409 MAGEC2Q9UBF1 373 aaPredicted RBP15.65■□□□□ 0.1
FANCA-220ENST00000566409 NDRG2Q9UN36 371 aaKnown RBP15.65■□□□□ 0.1
FANCA-220ENST00000566409 MRPS17Q9Y2R5 130 aaKnown RBP15.65■□□□□ 0.1
FANCA-220ENST00000566409 R4GN57 208 aa15.65■□□□□ 0.1
FANCA-220ENST00000566409 DPYSL4O14531 572 aa15.64■□□□□ 0.09
FANCA-220ENST00000566409 AKAP3O75969 853 aa15.64■□□□□ 0.09
FANCA-220ENST00000566409 RAP1GAPP47736 663 aa15.64■□□□□ 0.09
FANCA-220ENST00000566409 AP3M2P53677 418 aa15.64■□□□□ 0.09
FANCA-220ENST00000566409 CYP27A1Q02318 531 aa15.64■□□□□ 0.09
FANCA-220ENST00000566409 BIRC3Q13489 604 aa15.64■□□□□ 0.09
FANCA-220ENST00000566409 MAPRE1Q15691 268 aaKnown RBP15.64■□□□□ 0.09
FANCA-220ENST00000566409 ZACNQ401N2 412 aa15.64■□□□□ 0.09
FANCA-220ENST00000566409 ARHGAP29Q52LW3 1261 aa15.64■□□□□ 0.09
FANCA-220ENST00000566409 CEP135Q66GS9 1140 aa15.64■□□□□ 0.09
FANCA-220ENST00000566409 VSTM1Q6UX27 236 aa15.64■□□□□ 0.09
FANCA-220ENST00000566409 SV2AQ7L0J3 742 aa15.64■□□□□ 0.09
FANCA-220ENST00000566409 GUF1Q8N442 669 aaKnown RBP15.64■□□□□ 0.09
FANCA-220ENST00000566409 ENGASEQ8NFI3 743 aa15.64■□□□□ 0.09
FANCA-220ENST00000566409 TMC2Q8TDI7 906 aa15.64■□□□□ 0.09
FANCA-220ENST00000566409 NKD2Q969F2 451 aaPredicted RBP15.64■□□□□ 0.09
FANCA-220ENST00000566409 SYAP1Q96A49 352 aaPredicted RBP15.64■□□□□ 0.09
FANCA-220ENST00000566409 SPATA17Q96L03 361 aa15.64■□□□□ 0.09
FANCA-220ENST00000566409 CYP2S1Q96SQ9 504 aa15.64■□□□□ 0.09
FANCA-220ENST00000566409 FAM83CQ9BQN1 747 aa15.64■□□□□ 0.09
FANCA-220ENST00000566409 ZMYM5Q9UJ78 669 aa15.64■□□□□ 0.09
FANCA-220ENST00000566409 ATG2BQ96BY7 2078 aa15.64■□□□□ 0.09
FANCA-220ENST00000566409 HELZP42694 1942 aaKnown RBP15.64■□□□□ 0.09
FANCA-220ENST00000566409 OTOL1A6NHN0 477 aaPredicted RBP15.63■□□□□ 0.09
FANCA-220ENST00000566409 SOBPA7XYQ1 873 aa15.63■□□□□ 0.09
FANCA-220ENST00000566409 CALUO43852 315 aaPredicted RBP15.63■□□□□ 0.09
FANCA-220ENST00000566409 CHRNB1P11230 501 aa15.63■□□□□ 0.09
FANCA-220ENST00000566409 DDX6P26196 483 aaKnown RBP eCLIP15.63■□□□□ 0.09
FANCA-220ENST00000566409 AVPR1AP37288 418 aa15.63■□□□□ 0.09
FANCA-220ENST00000566409 GRIK1P39086 918 aa15.63■□□□□ 0.09
FANCA-220ENST00000566409 MAGEA9P43362 315 aa15.63■□□□□ 0.09
FANCA-220ENST00000566409 MTAPQ13126 283 aa15.63■□□□□ 0.09
FANCA-220ENST00000566409 PNOCQ13519 176 aa15.63■□□□□ 0.09
FANCA-220ENST00000566409 NFIL3Q16649 462 aa15.63■□□□□ 0.09
FANCA-220ENST00000566409 ZNF699Q32M78 642 aa15.63■□□□□ 0.09
FANCA-220ENST00000566409 ZCWPW2Q504Y3 356 aa15.63■□□□□ 0.09
FANCA-220ENST00000566409 SMYD4Q8IYR2 804 aaPredicted RBP15.63■□□□□ 0.09
FANCA-220ENST00000566409 B3GALNT2Q8NCR0 500 aa15.63■□□□□ 0.09
FANCA-220ENST00000566409 CSGALNACT1Q8TDX6 532 aa15.63■□□□□ 0.09
FANCA-220ENST00000566409 MRPS31Q92665 395 aaKnown RBP15.63■□□□□ 0.09
FANCA-220ENST00000566409 CHFRQ96EP1 664 aa15.63■□□□□ 0.09
FANCA-220ENST00000566409 B3GNT5Q9BYG0 378 aa15.63■□□□□ 0.09
FANCA-220ENST00000566409 ZNF518BQ9C0D4 1074 aa15.63■□□□□ 0.09
FANCA-220ENST00000566409 LMAN1LQ9HAT1 526 aa15.63■□□□□ 0.09
FANCA-220ENST00000566409 GKN1Q9NS71 199 aa15.63■□□□□ 0.09
FANCA-220ENST00000566409 TDP1Q9NUW8 608 aa15.63■□□□□ 0.09
FANCA-220ENST00000566409 UXTQ9UBK9 157 aaPredicted RBP15.63■□□□□ 0.09
FANCA-220ENST00000566409 MYH10P35580 1976 aa15.62■□□□□ 0.09
FANCA-220ENST00000566409 DMXL1Q9Y485 3027 aa15.62■□□□□ 0.09
FANCA-220ENST00000566409 C2orf78A6NCI8 922 aa15.62■□□□□ 0.09
FANCA-220ENST00000566409 A8MXQ7 604 aa15.62■□□□□ 0.09
FANCA-220ENST00000566409 F8VP50 259 aa15.62■□□□□ 0.09
FANCA-220ENST00000566409 SPECC1L-ADORA2AF8WAN1 911 aa15.62■□□□□ 0.09
FANCA-220ENST00000566409 CLDN5O00501 218 aa15.62■□□□□ 0.09
FANCA-220ENST00000566409 IKBKBO14920 756 aa15.62■□□□□ 0.09
FANCA-220ENST00000566409 MAPK13O15264 365 aa15.62■□□□□ 0.09
FANCA-220ENST00000566409 NCAM2O15394 837 aa15.62■□□□□ 0.09
FANCA-220ENST00000566409 NR2F2P24468 414 aa15.62■□□□□ 0.09
FANCA-220ENST00000566409 CTHP32929 405 aa15.62■□□□□ 0.09
FANCA-220ENST00000566409 MCCD1P59942 119 aaPredicted RBP15.62■□□□□ 0.09
FANCA-220ENST00000566409 NUCB2P80303 420 aa15.62■□□□□ 0.09
FANCA-220ENST00000566409 GAS6Q14393 721 aa15.62■□□□□ 0.09
FANCA-220ENST00000566409 ZNF667Q5HYK9 610 aa15.62■□□□□ 0.09
FANCA-220ENST00000566409 TRIM68Q6AZZ1 485 aa15.62■□□□□ 0.09
FANCA-220ENST00000566409 SCARA5Q6ZMJ2 495 aa15.62■□□□□ 0.09
FANCA-220ENST00000566409 PAQR9Q6ZVX9 377 aa15.62■□□□□ 0.09
FANCA-220ENST00000566409 CCDC47Q96A33 483 aaKnown RBP15.62■□□□□ 0.09
FANCA-220ENST00000566409 C8orf48Q96LL4 319 aa15.62■□□□□ 0.09
FANCA-220ENST00000566409 CHRDQ9H2X0 955 aa15.62■□□□□ 0.09
FANCA-220ENST00000566409 C8orf33Q9H7E9 229 aaPredicted RBP15.62■□□□□ 0.09
FANCA-220ENST00000566409 HPS4Q9NQG7 708 aa15.62■□□□□ 0.09
FANCA-220ENST00000566409 GCNT4Q9P109 453 aa15.62■□□□□ 0.09
FANCA-220ENST00000566409 FBXO4Q9UKT5 387 aa15.62■□□□□ 0.09
FANCA-220ENST00000566409 FRMD4BQ9Y2L6 1034 aa15.62■□□□□ 0.09
FANCA-220ENST00000566409 LAMTOR5O43504 91 aa15.61■□□□□ 0.09
FANCA-220ENST00000566409 ASS1P00966 412 aaKnown RBP15.61■□□□□ 0.09
FANCA-220ENST00000566409 TRIM49P0CI25 452 aa15.61■□□□□ 0.09
FANCA-220ENST00000566409 TRIM49CP0CI26 452 aa15.61■□□□□ 0.09
FANCA-220ENST00000566409 VAMP7P51809 220 aa15.61■□□□□ 0.09
FANCA-220ENST00000566409 KPNA1P52294 538 aaPredicted RBP15.61■□□□□ 0.09
FANCA-220ENST00000566409 ZXDBP98169 803 aa15.61■□□□□ 0.09
FANCA-220ENST00000566409 PLCB2Q00722 1185 aa15.61■□□□□ 0.09
FANCA-220ENST00000566409 CSTF1Q05048 431 aaKnown RBP15.61■□□□□ 0.09
FANCA-220ENST00000566409 PPP3CAQ08209 521 aa15.61■□□□□ 0.09
FANCA-220ENST00000566409 ZNF268Q14587 947 aaPredicted RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms