RNA–Protein interactions for RNA: ENST00000565639.6

PKD1-230, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,976 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-230ENST00000565639 RNPC3Q96LT9 517 aaKnown RBP20.34■□□□□ 0.85
PKD1-230ENST00000565639 CASD1Q96PB1 797 aa20.34■□□□□ 0.85
PKD1-230ENST00000565639 NAP1L3Q99457 506 aaPredicted RBP20.34■□□□□ 0.85
PKD1-230ENST00000565639 TMEM59LQ9UK28 342 aa20.34■□□□□ 0.85
PKD1-230ENST00000565639 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.34■□□□□ 0.85
PKD1-230ENST00000565639 TIMM13Q9Y5L4 95 aaPredicted RBP20.34■□□□□ 0.85
PKD1-230ENST00000565639 TULP2O00295 520 aa20.34■□□□□ 0.85
PKD1-230ENST00000565639 PSTPIP1O43586 416 aa20.34■□□□□ 0.85
PKD1-230ENST00000565639 ATP2C2O75185 946 aa20.34■□□□□ 0.85
PKD1-230ENST00000565639 RFC1P35251 1148 aaPredicted RBP20.34■□□□□ 0.85
PKD1-230ENST00000565639 SLC8A3P57103 927 aa20.34■□□□□ 0.85
PKD1-230ENST00000565639 C2orf54Q08AI8 447 aa20.34■□□□□ 0.85
PKD1-230ENST00000565639 ZNF252P-AS1Q0IIN9 211 aa20.34■□□□□ 0.85
PKD1-230ENST00000565639 PAN2Q504Q3 1202 aaKnown RBP20.34■□□□□ 0.85
PKD1-230ENST00000565639 KIAA0319Q5VV43 1072 aa20.34■□□□□ 0.85
PKD1-230ENST00000565639 ACBD6Q9BR61 282 aa20.34■□□□□ 0.85
PKD1-230ENST00000565639 PLVAPQ9BX97 442 aa20.34■□□□□ 0.85
PKD1-230ENST00000565639 DUSP16Q9BY84 665 aa20.34■□□□□ 0.85
PKD1-230ENST00000565639 CRTAC1Q9NQ79 661 aa20.34■□□□□ 0.85
PKD1-230ENST00000565639 TSC2P49815 1807 aa20.33■□□□□ 0.85
PKD1-230ENST00000565639 TKTP29401 623 aaKnown RBP20.33■□□□□ 0.84
PKD1-230ENST00000565639 ACADSBP45954 432 aa20.33■□□□□ 0.84
PKD1-230ENST00000565639 PLA2G4AP47712 749 aa20.33■□□□□ 0.84
PKD1-230ENST00000565639 RGS7P49802 495 aa20.33■□□□□ 0.84
PKD1-230ENST00000565639 NPAS4Q8IUM7 802 aa20.33■□□□□ 0.84
PKD1-230ENST00000565639 RHOT1Q8IXI2 618 aa20.33■□□□□ 0.84
PKD1-230ENST00000565639 METTL5Q9NRN9 209 aaKnown RBP20.33■□□□□ 0.84
PKD1-230ENST00000565639 PCDHB8Q9UN66 801 aa20.33■□□□□ 0.84
PKD1-230ENST00000565639 I3L4J1 428 aa20.32■□□□□ 0.84
PKD1-230ENST00000565639 XPO1O14980 1071 aaKnown RBP20.32■□□□□ 0.84
PKD1-230ENST00000565639 ITGB1P05556 798 aa20.32■□□□□ 0.84
PKD1-230ENST00000565639 HSPA1AP0DMV8 641 aaKnown RBP20.32■□□□□ 0.84
PKD1-230ENST00000565639 HSPA1BP0DMV9 641 aaKnown RBP20.32■□□□□ 0.84
PKD1-230ENST00000565639 OGDHQ02218 1023 aa20.32■□□□□ 0.84
PKD1-230ENST00000565639 MDH1BQ5I0G3 518 aa20.32■□□□□ 0.84
PKD1-230ENST00000565639 FAM102AQ5T9C2 384 aaPredicted RBP20.32■□□□□ 0.84
PKD1-230ENST00000565639 OR6B2Q6IFH4 312 aa20.32■□□□□ 0.84
PKD1-230ENST00000565639 CNKSR3Q6P9H4 555 aa20.32■□□□□ 0.84
PKD1-230ENST00000565639 FAM183BPQ6ZVS7 135 aa20.32■□□□□ 0.84
PKD1-230ENST00000565639 PAQR9Q6ZVX9 377 aa20.32■□□□□ 0.84
PKD1-230ENST00000565639 JOSD2Q8TAC2 188 aa20.32■□□□□ 0.84
PKD1-230ENST00000565639 MYCBPAPQ8TBZ2 947 aa20.32■□□□□ 0.84
PKD1-230ENST00000565639 HASPINQ8TF76 798 aa20.32■□□□□ 0.84
PKD1-230ENST00000565639 MRPL9Q9BYD2 267 aaKnown RBP20.32■□□□□ 0.84
PKD1-230ENST00000565639 RBM12Q9NTZ6 932 aaKnown RBP20.32■□□□□ 0.84
PKD1-230ENST00000565639 SCNN1AP37088 669 aa20.32■□□□□ 0.84
PKD1-230ENST00000565639 OR1G1P47890 313 aa20.32■□□□□ 0.84
PKD1-230ENST00000565639 RNASE9P60153 205 aaKnown RBP20.32■□□□□ 0.84
PKD1-230ENST00000565639 ACAP1Q15027 740 aa20.32■□□□□ 0.84
PKD1-230ENST00000565639 LRRC26Q2I0M4 334 aa20.32■□□□□ 0.84
PKD1-230ENST00000565639 SEL1L2Q5TEA6 688 aa20.32■□□□□ 0.84
PKD1-230ENST00000565639 LRRC38Q5VT99 294 aa20.32■□□□□ 0.84
PKD1-230ENST00000565639 CCDC70Q6NSX1 233 aa20.32■□□□□ 0.84
PKD1-230ENST00000565639 NECAB2Q7Z6G3 386 aa20.32■□□□□ 0.84
PKD1-230ENST00000565639 DEFB128Q7Z7B8 93 aa20.32■□□□□ 0.84
PKD1-230ENST00000565639 RTP3Q9BQQ7 232 aa20.32■□□□□ 0.84
PKD1-230ENST00000565639 TMEM106CQ9BVX2 250 aa20.32■□□□□ 0.84
PKD1-230ENST00000565639 ANKZF1Q9H8Y5 726 aa20.32■□□□□ 0.84
PKD1-230ENST00000565639 CCDC188H7C350 402 aa20.31■□□□□ 0.84
PKD1-230ENST00000565639 TRAPPC3O43617 180 aa20.31■□□□□ 0.84
PKD1-230ENST00000565639 FGGP02679 453 aa20.31■□□□□ 0.84
PKD1-230ENST00000565639 TUBBP07437 444 aa20.31■□□□□ 0.84
PKD1-230ENST00000565639 NPR3P17342 541 aa20.31■□□□□ 0.84
PKD1-230ENST00000565639 IKBKEQ14164 716 aa20.31■□□□□ 0.84
PKD1-230ENST00000565639 OVOS1Q6IE37 1185 aa20.31■□□□□ 0.84
PKD1-230ENST00000565639 OLFML1Q6UWY5 402 aa20.31■□□□□ 0.84
PKD1-230ENST00000565639 THEM5Q8N1Q8 247 aa20.31■□□□□ 0.84
PKD1-230ENST00000565639 B3GNT5Q9BYG0 378 aa20.31■□□□□ 0.84
PKD1-230ENST00000565639 DNAJB4Q9UDY4 337 aa20.31■□□□□ 0.84
PKD1-230ENST00000565639 GABBR2O75899 941 aa20.3■□□□□ 0.84
PKD1-230ENST00000565639 PYGMP11217 842 aa20.3■□□□□ 0.84
PKD1-230ENST00000565639 PSMA2P25787 234 aa20.3■□□□□ 0.84
PKD1-230ENST00000565639 SLC6A3Q01959 620 aa20.3■□□□□ 0.84
PKD1-230ENST00000565639 ZNF211Q13398 564 aaPredicted RBP20.3■□□□□ 0.84
PKD1-230ENST00000565639 CC2D1AQ6P1N0 951 aaPredicted RBP20.3■□□□□ 0.84
PKD1-230ENST00000565639 NRDE2Q9H7Z3 1164 aa20.3■□□□□ 0.84
PKD1-230ENST00000565639 USTQ9Y2C2 406 aa20.3■□□□□ 0.84
PKD1-230ENST00000565639 KIAA0100Q14667 2235 aaKnown RBP20.3■□□□□ 0.84
PKD1-230ENST00000565639 MICAL3Q7RTP6 2002 aa20.3■□□□□ 0.84
PKD1-230ENST00000565639 TARSL2A2RTX5 802 aaKnown RBP20.3■□□□□ 0.84
PKD1-230ENST00000565639 MYBPHLA2RUH7 354 aa20.3■□□□□ 0.84
PKD1-230ENST00000565639 F8VP50 259 aa20.3■□□□□ 0.84
PKD1-230ENST00000565639 F8W810 466 aa20.3■□□□□ 0.84
PKD1-230ENST00000565639 PAPSS1O43252 624 aaPredicted RBP20.3■□□□□ 0.84
PKD1-230ENST00000565639 RHOXF2BP0C7M4 288 aa20.3■□□□□ 0.84
PKD1-230ENST00000565639 FAM200BP0CF97 657 aa20.3■□□□□ 0.84
PKD1-230ENST00000565639 TAS2R40P59535 323 aa20.3■□□□□ 0.84
PKD1-230ENST00000565639 GLE1Q53GS7 698 aaKnown RBP20.3■□□□□ 0.84
PKD1-230ENST00000565639 INTS6LQ5JSJ4 861 aaKnown RBP20.3■□□□□ 0.84
PKD1-230ENST00000565639 FAM171BQ6P995 826 aa20.3■□□□□ 0.84
PKD1-230ENST00000565639 KATNAL2Q8IYT4 538 aa20.3■□□□□ 0.84
PKD1-230ENST00000565639 KCTD13Q8WZ19 329 aa20.3■□□□□ 0.84
PKD1-230ENST00000565639 PCED1BQ96HM7 432 aa20.3■□□□□ 0.84
PKD1-230ENST00000565639 RHOXF2Q9BQY4 288 aa20.3■□□□□ 0.84
PKD1-230ENST00000565639 MED10Q9BTT4 135 aa20.3■□□□□ 0.84
PKD1-230ENST00000565639 EPC1Q9H2F5 836 aa20.3■□□□□ 0.84
PKD1-230ENST00000565639 KRIT1O00522 736 aa20.29■□□□□ 0.84
PKD1-230ENST00000565639 MAPRE1Q15691 268 aaKnown RBP20.29■□□□□ 0.84
PKD1-230ENST00000565639 CCDC142Q17RM4 750 aa20.29■□□□□ 0.84
PKD1-230ENST00000565639 LONRF2Q1L5Z9 754 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms