RNA–Protein interactions for RNA: ENST00000556626.5

SPTB-208, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best) BASIC

Gene SPTB, Length 10,153 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-208ENST00000556626 CNKSR1Q969H4 720 aa11.26□□□□□ -0.61
SPTB-208ENST00000556626 FAM49AQ9H0Q0 323 aaPredicted RBP11.26□□□□□ -0.61
SPTB-208ENST00000556626 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.26□□□□□ -0.61
SPTB-208ENST00000556626 TPST1O60507 370 aa11.26□□□□□ -0.61
SPTB-208ENST00000556626 SKAP2O75563 359 aaPredicted RBP11.26□□□□□ -0.61
SPTB-208ENST00000556626 SOAT1P35610 550 aa11.26□□□□□ -0.61
SPTB-208ENST00000556626 RAD51Q06609 339 aa11.26□□□□□ -0.61
SPTB-208ENST00000556626 SMTNL2Q2TAL5 461 aa11.26□□□□□ -0.61
SPTB-208ENST00000556626 SUPT20HL1Q3ZLR7 823 aa11.26□□□□□ -0.61
SPTB-208ENST00000556626 TSHZ1Q6ZSZ6 1077 aa11.26□□□□□ -0.61
SPTB-208ENST00000556626 OTOAQ7RTW8 1153 aa11.26□□□□□ -0.61
SPTB-208ENST00000556626 UNC45BQ8IWX7 931 aa11.26□□□□□ -0.61
SPTB-208ENST00000556626 SCFD2Q8WU76 684 aa11.26□□□□□ -0.61
SPTB-208ENST00000556626 CAVIN3Q969G5 261 aa11.26□□□□□ -0.61
SPTB-208ENST00000556626 MOSPD1Q9UJG1 213 aa11.26□□□□□ -0.61
SPTB-208ENST00000556626 SASH1O94885 1247 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 PECAM1P16284 738 aaPredicted RBP11.25□□□□□ -0.61
SPTB-208ENST00000556626 SWT1Q5T5J6 900 aaKnown RBP11.25□□□□□ -0.61
SPTB-208ENST00000556626 ZCCHC7Q8N3Z6 543 aaKnown RBP11.25□□□□□ -0.61
SPTB-208ENST00000556626 KCNB2Q92953 911 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 PAIP1Q9H074 479 aaKnown RBP11.25□□□□□ -0.61
SPTB-208ENST00000556626 NMRK1Q9NWW6 199 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 PSMC5P62195 406 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 MAPK11Q15759 364 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 FAM98CQ17RN3 349 aaKnown RBP11.25□□□□□ -0.61
SPTB-208ENST00000556626 GALNTL6Q49A17 601 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 DPP10Q8N608 796 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 STKLD1Q8NE28 680 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 MCM8Q9UJA3 840 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 SLC39A10Q9ULF5 831 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 PRMT9Q6P2P2 845 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 FASTKD5Q7L8L6 764 aaKnown RBP11.25□□□□□ -0.61
SPTB-208ENST00000556626 KYQ8NBH2 561 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 TMEM47Q9BQJ4 181 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 SHCBP1LQ9BZQ2 653 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 FHDC1Q9C0D6 1143 aaPredicted RBP11.25□□□□□ -0.61
SPTB-208ENST00000556626 SMARCAD1Q9H4L7 1026 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.25□□□□□ -0.61
SPTB-208ENST00000556626 PALLDQ8WX93 1383 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 PXDNLA1KZ92 1463 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 ERVV-1B6SEH8 477 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 P4HBP07237 508 aaKnown RBP11.25□□□□□ -0.61
SPTB-208ENST00000556626 TFE3P19532 575 aaPredicted RBP11.25□□□□□ -0.61
SPTB-208ENST00000556626 SLC34A1Q06495 639 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 DGUOKQ16854 277 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 RGS21Q2M5E4 152 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 ELOA2Q8IYF1 753 aaPredicted RBP11.25□□□□□ -0.61
SPTB-208ENST00000556626 ENOPH1Q9UHY7 261 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 CLRN2A0PK11 232 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 H7C0S8 307 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 OVGP1Q12889 678 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 FAM71DQ8N9W8 422 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 SH3RF3Q8TEJ3 882 aaPredicted RBP11.25□□□□□ -0.61
SPTB-208ENST00000556626 DPF2Q92785 391 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 PNMA3Q9UL41 463 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 TRIM49D1C9J1S8 452 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 NMT2O60551 498 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 CAPZA2P47755 286 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 SHROOM1Q2M3G4 852 aaPredicted RBP11.25□□□□□ -0.61
SPTB-208ENST00000556626 DPY19L2Q6NUT2 758 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 RAD9BQ6WBX8 426 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 MIGA2Q7L4E1 593 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 FAM9CQ8IZT9 166 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 ZNF560Q96MR9 790 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 MADDQ8WXG6 1647 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 BBOX1O75936 387 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 LCA5LO95447 670 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 RALAP11233 206 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 AQP5P55064 265 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 FUT11Q495W5 492 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 SPATA16Q9BXB7 569 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 NOL6Q9H6R4 1146 aaKnown RBP11.25□□□□□ -0.61
SPTB-208ENST00000556626 TBX22Q9Y458 520 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 CHD1O14646 1710 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 GHRP10912 638 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 ADSSL1Q8N142 457 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 SVOPQ8N4V2 548 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 USP33Q8TEY7 942 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 GDPD5Q8WTR4 605 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 TMEM120AQ9BXJ8 343 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 RERGLQ9H628 205 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 CYLDQ9NQC7 956 aa11.25□□□□□ -0.61
SPTB-208ENST00000556626 PIH1D3Q9NQM4 214 aaKnown RBP11.25□□□□□ -0.61
SPTB-208ENST00000556626 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.24□□□□□ -0.61
SPTB-208ENST00000556626 PRLRP16471 622 aa11.24□□□□□ -0.61
SPTB-208ENST00000556626 NANOGNBQ7Z5D8 188 aa11.24□□□□□ -0.61
SPTB-208ENST00000556626 JPH1Q9HDC5 661 aaPredicted RBP11.24□□□□□ -0.61
SPTB-208ENST00000556626 STON1Q9Y6Q2 735 aa11.24□□□□□ -0.61
SPTB-208ENST00000556626 AHCYL1O43865 530 aa11.24□□□□□ -0.61
SPTB-208ENST00000556626 YY1P25490 414 aa11.24□□□□□ -0.61
SPTB-208ENST00000556626 EFNA5P52803 228 aa11.24□□□□□ -0.61
SPTB-208ENST00000556626 BTBD8Q5XKL5 378 aa11.24□□□□□ -0.61
SPTB-208ENST00000556626 KCTD14Q9BQ13 255 aaPredicted RBP11.24□□□□□ -0.61
SPTB-208ENST00000556626 INTS13Q9NVM9 706 aa11.24□□□□□ -0.61
SPTB-208ENST00000556626 PEX1O43933 1283 aa11.24□□□□□ -0.61
SPTB-208ENST00000556626 GLRA3O75311 464 aa11.24□□□□□ -0.61
SPTB-208ENST00000556626 AP1G2O75843 785 aa11.24□□□□□ -0.61
SPTB-208ENST00000556626 ALDH6A1Q02252 535 aaKnown RBP11.24□□□□□ -0.61
SPTB-208ENST00000556626 DEFB107AQ8IZN7 70 aa11.24□□□□□ -0.61
SPTB-208ENST00000556626 E9PCH4 1651 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms