RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 CELF4Q9BZC1 486 aaKnown RBP18.08■□□□□ 0.49
PTPN21-208ENST00000556564 CPSF2Q9P2I0 782 aaKnown RBP18.08■□□□□ 0.49
PTPN21-208ENST00000556564 SUN2Q9UH99 717 aa18.08■□□□□ 0.49
PTPN21-208ENST00000556564 VPS28Q9UK41 221 aa18.08■□□□□ 0.49
PTPN21-208ENST00000556564 MAGOHP61326 146 aaKnown RBP18.08■□□□□ 0.48
PTPN21-208ENST00000556564 FAM47EQ6ZV65 393 aa18.08■□□□□ 0.48
PTPN21-208ENST00000556564 DDIASQ8IXT1 998 aa18.08■□□□□ 0.48
PTPN21-208ENST00000556564 TRAIPQ9BWF2 469 aa18.08■□□□□ 0.48
PTPN21-208ENST00000556564 ZC3H7BQ9UGR2 993 aaKnown RBP18.08■□□□□ 0.48
PTPN21-208ENST00000556564 FBXL5Q9UKA1 691 aa18.08■□□□□ 0.48
PTPN21-208ENST00000556564 PKP3Q9Y446 797 aa18.08■□□□□ 0.48
PTPN21-208ENST00000556564 SLIT2O94813 1529 aa18.08■□□□□ 0.48
PTPN21-208ENST00000556564 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.08■□□□□ 0.48
PTPN21-208ENST00000556564 GOLGA8RI6L899 631 aa18.08■□□□□ 0.48
PTPN21-208ENST00000556564 FOPNLQ96NB1 174 aa18.08■□□□□ 0.48
PTPN21-208ENST00000556564 KCNF1Q9H3M0 494 aa18.08■□□□□ 0.48
PTPN21-208ENST00000556564 IPPQ9Y573 584 aa18.08■□□□□ 0.48
PTPN21-208ENST00000556564 OXCT1P55809 520 aa18.08■□□□□ 0.48
PTPN21-208ENST00000556564 DENND5BQ6ZUT9 1274 aa18.08■□□□□ 0.48
PTPN21-208ENST00000556564 SLC51AQ86UW1 340 aa18.08■□□□□ 0.48
PTPN21-208ENST00000556564 TMCC1O94876 653 aa18.07■□□□□ 0.48
PTPN21-208ENST00000556564 CSE1LP55060 971 aaKnown RBP18.07■□□□□ 0.48
PTPN21-208ENST00000556564 ZPBP2Q6X784 338 aa18.07■□□□□ 0.48
PTPN21-208ENST00000556564 SH3BP5LQ7L8J4 393 aa18.07■□□□□ 0.48
PTPN21-208ENST00000556564 LMNTD2Q8IXW0 634 aa18.07■□□□□ 0.48
PTPN21-208ENST00000556564 HTATIP2Q9BUP3 242 aa18.07■□□□□ 0.48
PTPN21-208ENST00000556564 RHOCP08134 193 aa18.07■□□□□ 0.48
PTPN21-208ENST00000556564 PAK5Q9P286 719 aa18.07■□□□□ 0.48
PTPN21-208ENST00000556564 ATP8B1O43520 1251 aa18.07■□□□□ 0.48
PTPN21-208ENST00000556564 MUM1Q2TAK8 710 aa18.07■□□□□ 0.48
PTPN21-208ENST00000556564 PTRHD1Q6GMV3 140 aaKnown RBP18.07■□□□□ 0.48
PTPN21-208ENST00000556564 AMIGO3Q86WK7 504 aa18.07■□□□□ 0.48
PTPN21-208ENST00000556564 PPWD1Q96BP3 646 aaKnown RBP18.07■□□□□ 0.48
PTPN21-208ENST00000556564 SMARCD1Q96GM5 515 aa18.07■□□□□ 0.48
PTPN21-208ENST00000556564 CHMP2BQ9UQN3 213 aa18.07■□□□□ 0.48
PTPN21-208ENST00000556564 CASQ2O14958 399 aaPredicted RBP18.07■□□□□ 0.48
PTPN21-208ENST00000556564 ZNF263O14978 683 aa18.07■□□□□ 0.48
PTPN21-208ENST00000556564 GFAPP14136 432 aa18.07■□□□□ 0.48
PTPN21-208ENST00000556564 GGCXP38435 758 aa18.07■□□□□ 0.48
PTPN21-208ENST00000556564 CCDC38Q502W7 563 aa18.07■□□□□ 0.48
PTPN21-208ENST00000556564 FBXO38Q6PIJ6 1188 aa18.07■□□□□ 0.48
PTPN21-208ENST00000556564 MFN1Q8IWA4 741 aa18.07■□□□□ 0.48
PTPN21-208ENST00000556564 EPS15L1Q9UBC2 864 aa18.07■□□□□ 0.48
PTPN21-208ENST00000556564 NEU2Q9Y3R4 380 aa18.07■□□□□ 0.48
PTPN21-208ENST00000556564 F8VZ95 297 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 UGCGQ16739 394 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 COBLL1Q53SF7 1204 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 FAXCQ5TGI0 409 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 PITPNM3Q9BZ71 974 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 MMP3P08254 477 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 RALBP11234 206 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 ACAD11Q709F0 780 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 DNAAF5Q86Y56 855 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 HAS1Q92839 578 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 MRPL17Q9NRX2 175 aaKnown RBP18.06■□□□□ 0.48
PTPN21-208ENST00000556564 BLOC1S4Q9NUP1 217 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 BDNFP23560 247 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 BOLA3Q53S33 107 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 CENPPQ6IPU0 288 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 BTNL9Q6UXG8 535 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 PLPPR4Q7Z2D5 763 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 LENG1Q96BZ8 264 aaPredicted RBP18.06■□□□□ 0.48
PTPN21-208ENST00000556564 PPP1R36Q96LQ0 422 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 ZNF558Q96NG5 402 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 PACSIN1Q9BY11 444 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 ASB7Q9H672 318 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 ZNF280AP59817 542 aaPredicted RBP18.06■□□□□ 0.48
PTPN21-208ENST00000556564 TPCN2Q8NHX9 752 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 APOL5Q9BWW9 433 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 CASS4Q9NQ75 786 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 SPTLC1O15269 473 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 MAFO75444 373 aaPredicted RBP18.06■□□□□ 0.48
PTPN21-208ENST00000556564 HIST1H2AGP0C0S8 130 aaPredicted RBP18.06■□□□□ 0.48
PTPN21-208ENST00000556564 RBP3P10745 1247 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 HIST1H2ADP20671 130 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 KCNJ1P48048 391 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 MAP4K3Q8IVH8 894 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 WDR75Q8IWA0 830 aaKnown RBP18.06■□□□□ 0.48
PTPN21-208ENST00000556564 BLOC1S5Q8TDH9 187 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 KRT35Q92764 455 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 HIST1H2AHQ96KK5 128 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 HIST1H2AJQ99878 128 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 H2AFJQ9BTM1 129 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 ALG13Q9NP73 1137 aaKnown RBP18.06■□□□□ 0.48
PTPN21-208ENST00000556564 LATS2Q9NRM7 1088 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 GTF3C4Q9UKN8 822 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 ST3GAL5Q9UNP4 418 aa18.06■□□□□ 0.48
PTPN21-208ENST00000556564 SYNCRIPO60506 623 aaKnown RBP18.05■□□□□ 0.48
PTPN21-208ENST00000556564 CCDC15Q0P6D6 951 aa18.05■□□□□ 0.48
PTPN21-208ENST00000556564 BRSK2Q8IWQ3 736 aa18.05■□□□□ 0.48
PTPN21-208ENST00000556564 PDZD8Q8NEN9 1154 aa18.05■□□□□ 0.48
PTPN21-208ENST00000556564 E4F1Q66K89 784 aaPredicted RBP18.05■□□□□ 0.48
PTPN21-208ENST00000556564 NECAB2Q7Z6G3 386 aa18.05■□□□□ 0.48
PTPN21-208ENST00000556564 SLC2A14Q8TDB8 520 aa18.05■□□□□ 0.48
PTPN21-208ENST00000556564 SPDL1Q96EA4 605 aa18.05■□□□□ 0.48
PTPN21-208ENST00000556564 THG1LQ9NWX6 298 aaKnown RBP18.05■□□□□ 0.48
PTPN21-208ENST00000556564 BTBD7Q9P203 1132 aa18.05■□□□□ 0.48
PTPN21-208ENST00000556564 CBX4O00257 560 aa18.05■□□□□ 0.48
PTPN21-208ENST00000556564 XYLBO75191 536 aa18.05■□□□□ 0.48
PTPN21-208ENST00000556564 NUDCD3Q8IVD9 361 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms