RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 TDP1Q9NUW8 608 aa18.36■□□□□ 0.53
GPHN-211ENST00000556020 NME7Q9Y5B8 376 aa18.36■□□□□ 0.53
GPHN-211ENST00000556020 ATP6V1DQ9Y5K8 247 aa18.36■□□□□ 0.53
GPHN-211ENST00000556020 ANAPC1Q9H1A4 1944 aa18.35■□□□□ 0.53
GPHN-211ENST00000556020 LRRIQ3A6PVS8 624 aaPredicted RBP18.35■□□□□ 0.53
GPHN-211ENST00000556020 NR3C1P04150 777 aa18.35■□□□□ 0.53
GPHN-211ENST00000556020 CKMP06732 381 aa18.35■□□□□ 0.53
GPHN-211ENST00000556020 CHRNB1P11230 501 aa18.35■□□□□ 0.53
GPHN-211ENST00000556020 MLLT6P55198 1093 aaPredicted RBP18.35■□□□□ 0.53
GPHN-211ENST00000556020 LRRC32Q14392 662 aa18.35■□□□□ 0.53
GPHN-211ENST00000556020 ZNF699Q32M78 642 aa18.35■□□□□ 0.53
GPHN-211ENST00000556020 ITPRIPL2Q3MIP1 535 aa18.35■□□□□ 0.53
GPHN-211ENST00000556020 TDRD10Q5VZ19 366 aaKnown RBP18.35■□□□□ 0.53
GPHN-211ENST00000556020 CEP135Q66GS9 1140 aa18.35■□□□□ 0.53
GPHN-211ENST00000556020 CC2D1AQ6P1N0 951 aaPredicted RBP18.35■□□□□ 0.53
GPHN-211ENST00000556020 SCARA5Q6ZMJ2 495 aa18.35■□□□□ 0.53
GPHN-211ENST00000556020 RALGPS2Q86X27 583 aaPredicted RBP18.35■□□□□ 0.53
GPHN-211ENST00000556020 MYCBPAPQ8TBZ2 947 aa18.35■□□□□ 0.53
GPHN-211ENST00000556020 CCDC47Q96A33 483 aaKnown RBP18.35■□□□□ 0.53
GPHN-211ENST00000556020 SYAP1Q96A49 352 aaPredicted RBP18.35■□□□□ 0.53
GPHN-211ENST00000556020 MYRFLQ96LU7 910 aa18.35■□□□□ 0.53
GPHN-211ENST00000556020 SLC22A12Q96S37 553 aa18.35■□□□□ 0.53
GPHN-211ENST00000556020 CYP2S1Q96SQ9 504 aa18.35■□□□□ 0.53
GPHN-211ENST00000556020 SCAND2PQ9GZW5 306 aaPredicted RBP18.35■□□□□ 0.53
GPHN-211ENST00000556020 KCTD10Q9H3F6 313 aa18.35■□□□□ 0.53
GPHN-211ENST00000556020 EBF3Q9H4W6 596 aa18.35■□□□□ 0.53
GPHN-211ENST00000556020 PRMT8Q9NR22 394 aaPredicted RBP18.35■□□□□ 0.53
GPHN-211ENST00000556020 TRAV19A0A0A6YYK7 116 aa18.34■□□□□ 0.53
GPHN-211ENST00000556020 A8MXQ7 604 aa18.34■□□□□ 0.53
GPHN-211ENST00000556020 TACC1O75410 805 aa18.34■□□□□ 0.53
GPHN-211ENST00000556020 PTPN1P18031 435 aaKnown RBP18.34■□□□□ 0.53
GPHN-211ENST00000556020 RAP1GAPP47736 663 aa18.34■□□□□ 0.53
GPHN-211ENST00000556020 DLG4P78352 724 aa18.34■□□□□ 0.53
GPHN-211ENST00000556020 C1orf228Q6PIY5 440 aa18.34■□□□□ 0.53
GPHN-211ENST00000556020 VSTM1Q6UX27 236 aa18.34■□□□□ 0.53
GPHN-211ENST00000556020 RIN3Q8TB24 985 aa18.34■□□□□ 0.53
GPHN-211ENST00000556020 PARD3BQ8TEW8 1205 aa18.34■□□□□ 0.53
GPHN-211ENST00000556020 XYLT2Q9H1B5 865 aa18.34■□□□□ 0.53
GPHN-211ENST00000556020 GOLPH3LQ9H4A5 285 aa18.34■□□□□ 0.53
GPHN-211ENST00000556020 SMYD3Q9H7B4 428 aa18.34■□□□□ 0.53
GPHN-211ENST00000556020 KIF9Q9HAQ2 790 aa18.34■□□□□ 0.53
GPHN-211ENST00000556020 ZSCAN32Q9NX65 697 aa18.34■□□□□ 0.53
GPHN-211ENST00000556020 MAPK8IP1Q9UQF2 711 aa18.34■□□□□ 0.53
GPHN-211ENST00000556020 PCDHGA2Q9Y5H1 932 aa18.34■□□□□ 0.53
GPHN-211ENST00000556020 C2orf78A6NCI8 922 aa18.33■□□□□ 0.52
GPHN-211ENST00000556020 F8VP50 259 aa18.33■□□□□ 0.52
GPHN-211ENST00000556020 PDXKO00764 312 aa18.33■□□□□ 0.52
GPHN-211ENST00000556020 MYL1P05976 194 aa18.33■□□□□ 0.52
GPHN-211ENST00000556020 USP17L7P0C7H9 530 aa18.33■□□□□ 0.52
GPHN-211ENST00000556020 ATICP31939 592 aa18.33■□□□□ 0.52
GPHN-211ENST00000556020 CDH8P55286 799 aa18.33■□□□□ 0.52
GPHN-211ENST00000556020 USP46P62068 366 aa18.33■□□□□ 0.52
GPHN-211ENST00000556020 SATB1Q01826 763 aa18.33■□□□□ 0.52
GPHN-211ENST00000556020 IFRD2Q12894 506 aaPredicted RBP18.33■□□□□ 0.52
GPHN-211ENST00000556020 RUNX3Q13761 415 aa18.33■□□□□ 0.52
GPHN-211ENST00000556020 NCOA4Q13772 614 aa18.33■□□□□ 0.52
GPHN-211ENST00000556020 GAS6Q14393 721 aa18.33■□□□□ 0.52
GPHN-211ENST00000556020 ZNF667Q5HYK9 610 aa18.33■□□□□ 0.52
GPHN-211ENST00000556020 WDR44Q5JSH3 913 aa18.33■□□□□ 0.52
GPHN-211ENST00000556020 KRBA2Q6ZNG9 492 aa18.33■□□□□ 0.52
GPHN-211ENST00000556020 Q6ZS52 159 aa18.33■□□□□ 0.52
GPHN-211ENST00000556020 DENND5BQ6ZUT9 1274 aa18.33■□□□□ 0.52
GPHN-211ENST00000556020 ARL14EPQ8N8R7 260 aaPredicted RBP18.33■□□□□ 0.52
GPHN-211ENST00000556020 FAM83CQ9BQN1 747 aa18.33■□□□□ 0.52
GPHN-211ENST00000556020 HPS4Q9NQG7 708 aa18.33■□□□□ 0.52
GPHN-211ENST00000556020 DMAC2Q9NW81 257 aa18.33■□□□□ 0.52
GPHN-211ENST00000556020 ZNF292O60281 2723 aa18.32■□□□□ 0.52
GPHN-211ENST00000556020 HELZP42694 1942 aaKnown RBP18.32■□□□□ 0.52
GPHN-211ENST00000556020 SOBPA7XYQ1 873 aa18.32■□□□□ 0.52
GPHN-211ENST00000556020 CLDN5O00501 218 aa18.32■□□□□ 0.52
GPHN-211ENST00000556020 TRIM66O15016 1216 aa18.32■□□□□ 0.52
GPHN-211ENST00000556020 CALUO43852 315 aaPredicted RBP18.32■□□□□ 0.52
GPHN-211ENST00000556020 STAU1O95793 577 aaKnown RBP18.32■□□□□ 0.52
GPHN-211ENST00000556020 ARSAP15289 507 aa18.32■□□□□ 0.52
GPHN-211ENST00000556020 CXCL12P48061 93 aa18.32■□□□□ 0.52
GPHN-211ENST00000556020 CCR3P51677 355 aa18.32■□□□□ 0.52
GPHN-211ENST00000556020 AP3M2P53677 418 aa18.32■□□□□ 0.52
GPHN-211ENST00000556020 KCNB1Q14721 858 aa18.32■□□□□ 0.52
GPHN-211ENST00000556020 PPP2R5DQ14738 602 aa18.32■□□□□ 0.52
GPHN-211ENST00000556020 SLC9A9Q8IVB4 645 aa18.32■□□□□ 0.52
GPHN-211ENST00000556020 DCLK2Q8N568 766 aa18.32■□□□□ 0.52
GPHN-211ENST00000556020 SPATA17Q96L03 361 aa18.32■□□□□ 0.52
GPHN-211ENST00000556020 IER2Q9BTL4 223 aa18.32■□□□□ 0.52
GPHN-211ENST00000556020 ZNF518BQ9C0D4 1074 aa18.32■□□□□ 0.52
GPHN-211ENST00000556020 GVINP1Q7Z2Y8 2422 aa18.32■□□□□ 0.52
GPHN-211ENST00000556020 SPTBN4Q9H254 2564 aa18.32■□□□□ 0.52
GPHN-211ENST00000556020 EP300Q09472 2414 aaPredicted RBP18.31■□□□□ 0.52
GPHN-211ENST00000556020 FAM237AA0A1B0GTK4 181 aa18.31■□□□□ 0.52
GPHN-211ENST00000556020 A0A1W2PQ27 194 aa18.31■□□□□ 0.52
GPHN-211ENST00000556020 A0A1W2PQ64 194 aa18.31■□□□□ 0.52
GPHN-211ENST00000556020 A0A1W2PQD8 194 aa18.31■□□□□ 0.52
GPHN-211ENST00000556020 OTOL1A6NHN0 477 aaPredicted RBP18.31■□□□□ 0.52
GPHN-211ENST00000556020 VNN1O95497 513 aa18.31■□□□□ 0.52
GPHN-211ENST00000556020 ABL1P00519 1130 aa18.31■□□□□ 0.52
GPHN-211ENST00000556020 C4BPAP04003 597 aaKnown RBP18.31■□□□□ 0.52
GPHN-211ENST00000556020 HDCP19113 662 aa18.31■□□□□ 0.52
GPHN-211ENST00000556020 CACNA2D1P54289 1103 aa18.31■□□□□ 0.52
GPHN-211ENST00000556020 FAM160A1Q05DH4 1040 aa18.31■□□□□ 0.52
GPHN-211ENST00000556020 DPYDQ12882 1025 aa18.31■□□□□ 0.52
GPHN-211ENST00000556020 ZNF268Q14587 947 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms