RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 TSC2P49815 1807 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 ANO9A1A5B4 782 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 C2orf78A6NCI8 922 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 OR6C75A6NL08 312 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 H3BQV1 296 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 PIRO00625 290 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 CHADO15335 359 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 PRPF40AO75400 957 aaKnown RBP7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 TADA3O75528 432 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 ODC1P11926 461 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 HMGA1P17096 107 aaKnown RBP7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 PRPHP41219 470 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 SCTRP47872 440 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 GALK1P51570 392 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 CCR3P51677 355 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 TFAMQ00059 246 aaKnown RBP7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 LMNB2Q03252 620 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 DHX9Q08211 1270 aaKnown RBP7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 PSMD2Q13200 908 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 NNTQ13423 1086 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 CCINQ13939 588 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 SF3A1Q15459 793 aaKnown RBP7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 TAF12Q16514 161 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 HYIQ5T013 277 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 PPP1R26Q5T8A7 1209 aaPredicted RBP7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 ADALQ6DHV7 355 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 LAIR1Q6GTX8 287 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 ARMCX5Q6P1M9 558 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 ZPBP2Q6X784 338 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 TTC30AQ86WT1 665 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 ABCA7Q8IZY2 2146 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 CELF5Q8N6W0 485 aaKnown RBP7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 RASSF8Q8NHQ8 419 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 BPIFB1Q8TDL5 484 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 DEPDC1BQ8WUY9 529 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 RAD54LQ92698 747 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 SECISBP2LQ93073 1101 aaKnown RBP7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 BORCS6Q96GS4 357 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 ZSCAN31Q96LW9 406 aaPredicted RBP7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 RAB34Q9BZG1 259 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 TPSD1Q9BZJ3 242 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 ZCWPW1Q9H0M4 648 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 FSCN3Q9NQT6 498 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 GTF3C4Q9UKN8 822 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 AGO2Q9UKV8 859 aaKnown RBP7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 WDFY3Q8IZQ1 3526 aa7.38□□□□□ -1.23
PRPF40B-214ENST00000551320 PTPRJQ12913 1337 aa7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 A0A087X0B3 334 aa7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 MYMKA6NI61 221 aa7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 PATE3B3GLJ2 98 aa7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 SLC30A4O14863 429 aa7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 MICAL2O94851 1124 aa7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 F11P03951 625 aa7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 ITGB3P05106 788 aa7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 RETP07949 1114 aa7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 HAPLN1P10915 354 aaPredicted RBP7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 TYMPP19971 482 aa7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 POLR2BP30876 1174 aaKnown RBP7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 DDIT3P35638 169 aa7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 MAGEA9P43362 315 aa7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 NLRP12P59046 1061 aa7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 PSMC1P62191 440 aaKnown RBP7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 ZXDBP98169 803 aa7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 BFSP1Q12934 665 aa7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 ORC2Q13416 577 aaPredicted RBP7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 ST3GAL2Q16842 350 aa7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 ITPRIPL2Q3MIP1 535 aa7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 AASDHQ4L235 1098 aaPredicted RBP7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 RTL10Q7L3V2 364 aa7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 SCN4BQ8IWT1 228 aa7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 CMTM8Q8IZV2 173 aa7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 PDCL2Q8N4E4 241 aa7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 CCDC33Q8N5R6 958 aa7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 ARL14EPQ8N8R7 260 aaPredicted RBP7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 RPLP0P6Q8NHW5 317 aa7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 RTKNQ9BST9 563 aa7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 TASP1Q9H6P5 420 aa7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 PLEKHA5Q9HAU0 1116 aa7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 PARVGQ9HBI0 331 aa7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 PDE11AQ9HCR9 933 aa7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 CYLDQ9NQC7 956 aa7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 SH2B1Q9NRF2 756 aaPredicted RBP7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 L1RE1Q9UN81 338 aa7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 AGAP1Q9UPQ3 857 aa7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 NME7Q9Y5B8 376 aa7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 EML5Q05BV3 1969 aa7.37□□□□□ -1.23
PRPF40B-214ENST00000551320 FREM2Q5SZK8 3169 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 DMXL2Q8TDJ6 3036 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 VPS37CA5D8V6 355 aaPredicted RBP7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 PRR5-ARHGAP8B1AHC4 643 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 TBCAO75347 108 aaKnown RBP7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 RPP40O75818 363 aaKnown RBP7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 PRPF6O94906 941 aaKnown RBP7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 PIGRP01833 764 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 ADRB2P07550 413 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 ADRB1P08588 477 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 KRT19P08727 400 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 PDGFRBP09619 1106 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 CCDC192P0DO97 292 aa7.36□□□□□ -1.23
PRPF40B-214ENST00000551320 HNRNPLP14866 589 aaKnown RBP eCLIP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms