RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 NASPP49321 788 aaPredicted RBP12.38□□□□□ -0.43
PRPF40B-212ENST00000551111 CACNA2D1P54289 1103 aa12.38□□□□□ -0.43
PRPF40B-212ENST00000551111 MYL7Q01449 175 aa12.38□□□□□ -0.43
PRPF40B-212ENST00000551111 MTF1Q14872 753 aa12.38□□□□□ -0.43
PRPF40B-212ENST00000551111 CSRP2Q16527 193 aa12.38□□□□□ -0.43
PRPF40B-212ENST00000551111 EML3Q32P44 896 aa12.38□□□□□ -0.43
PRPF40B-212ENST00000551111 CEP68Q76N32 757 aa12.38□□□□□ -0.43
PRPF40B-212ENST00000551111 SPATA2LQ8IUW3 424 aaPredicted RBP12.38□□□□□ -0.43
PRPF40B-212ENST00000551111 TMEM86AQ8N2M4 240 aa12.38□□□□□ -0.43
PRPF40B-212ENST00000551111 SYNPOQ8N3V7 929 aa12.38□□□□□ -0.43
PRPF40B-212ENST00000551111 TOP6BLQ8N6T0 577 aa12.38□□□□□ -0.43
PRPF40B-212ENST00000551111 LINC00301Q8NCQ3 95 aa12.38□□□□□ -0.43
PRPF40B-212ENST00000551111 ZNF516Q92618 1163 aa12.38□□□□□ -0.43
PRPF40B-212ENST00000551111 MYLPFQ96A32 169 aa12.38□□□□□ -0.43
PRPF40B-212ENST00000551111 TRMT2BQ96GJ1 504 aaKnown RBP12.38□□□□□ -0.43
PRPF40B-212ENST00000551111 HPDLQ96IR7 371 aa12.38□□□□□ -0.43
PRPF40B-212ENST00000551111 HHIPQ96QV1 700 aa12.38□□□□□ -0.43
PRPF40B-212ENST00000551111 MRPL45Q9BRJ2 306 aaKnown RBP12.38□□□□□ -0.43
PRPF40B-212ENST00000551111 RTKNQ9BST9 563 aa12.38□□□□□ -0.43
PRPF40B-212ENST00000551111 ARRDC1-AS1Q9H2J1 176 aa12.38□□□□□ -0.43
PRPF40B-212ENST00000551111 ECT2Q9H8V3 914 aa12.38□□□□□ -0.43
PRPF40B-212ENST00000551111 ABCB6Q9NP58 842 aa12.38□□□□□ -0.43
PRPF40B-212ENST00000551111 KBTBD4Q9NVX7 518 aa12.38□□□□□ -0.43
PRPF40B-212ENST00000551111 HSPBP1Q9NZL4 362 aa12.38□□□□□ -0.43
PRPF40B-212ENST00000551111 ADAMTS9Q9P2N4 1935 aa12.37□□□□□ -0.43
PRPF40B-212ENST00000551111 SLC30A4O14863 429 aa12.37□□□□□ -0.43
PRPF40B-212ENST00000551111 DCLK1O15075 740 aa12.37□□□□□ -0.43
PRPF40B-212ENST00000551111 STX6O43752 255 aa12.37□□□□□ -0.43
PRPF40B-212ENST00000551111 DDX6P26196 483 aaKnown RBP eCLIP12.37□□□□□ -0.43
PRPF40B-212ENST00000551111 RPL10AP62906 217 aaKnown RBP12.37□□□□□ -0.43
PRPF40B-212ENST00000551111 FAM160A1Q05DH4 1040 aa12.37□□□□□ -0.43
PRPF40B-212ENST00000551111 MESP2Q0VG99 397 aa12.37□□□□□ -0.43
PRPF40B-212ENST00000551111 GRSF1Q12849 480 aaKnown RBP eCLIP12.37□□□□□ -0.43
PRPF40B-212ENST00000551111 USP4Q13107 963 aa12.37□□□□□ -0.43
PRPF40B-212ENST00000551111 ZNF268Q14587 947 aaPredicted RBP12.37□□□□□ -0.43
PRPF40B-212ENST00000551111 STK38Q15208 465 aa12.37□□□□□ -0.43
PRPF40B-212ENST00000551111 GAB4Q2WGN9 574 aa12.37□□□□□ -0.43
PRPF40B-212ENST00000551111 CFAP221Q4G0U5 840 aa12.37□□□□□ -0.43
PRPF40B-212ENST00000551111 SHC4Q6S5L8 630 aa12.37□□□□□ -0.43
PRPF40B-212ENST00000551111 EPM2AIP1Q7L775 607 aaPredicted RBP12.37□□□□□ -0.43
PRPF40B-212ENST00000551111 SFTPA1Q8IWL2 248 aa12.37□□□□□ -0.43
PRPF40B-212ENST00000551111 SH3RF2Q8TEC5 729 aa12.37□□□□□ -0.43
PRPF40B-212ENST00000551111 OSCP1Q8WVF1 389 aa12.37□□□□□ -0.43
PRPF40B-212ENST00000551111 SYT15Q9BQS2 421 aa12.37□□□□□ -0.43
PRPF40B-212ENST00000551111 TRIM9Q9C026 710 aa12.37□□□□□ -0.43
PRPF40B-212ENST00000551111 RNF38Q9H0F5 515 aa12.37□□□□□ -0.43
PRPF40B-212ENST00000551111 DPEP3Q9H4B8 488 aa12.37□□□□□ -0.43
PRPF40B-212ENST00000551111 DUS2Q9NX74 493 aaKnown RBP12.37□□□□□ -0.43
PRPF40B-212ENST00000551111 MORC2Q9Y6X9 1032 aaPredicted RBP12.37□□□□□ -0.43
PRPF40B-212ENST00000551111 TNRC6BQ9UPQ9 1833 aaKnown RBP12.37□□□□□ -0.43
PRPF40B-212ENST00000551111 ASCC3Q8N3C0 2202 aaKnown RBP12.36□□□□□ -0.43
PRPF40B-212ENST00000551111 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.36□□□□□ -0.43
PRPF40B-212ENST00000551111 ZNF233A6NK53 670 aa12.36□□□□□ -0.43
PRPF40B-212ENST00000551111 LRP3O75074 770 aa12.36□□□□□ -0.43
PRPF40B-212ENST00000551111 KRT37O76014 449 aa12.36□□□□□ -0.43
PRPF40B-212ENST00000551111 CKMP06732 381 aa12.36□□□□□ -0.43
PRPF40B-212ENST00000551111 CNR2P34972 360 aa12.36□□□□□ -0.43
PRPF40B-212ENST00000551111 RAP1GAPP47736 663 aa12.36□□□□□ -0.43
PRPF40B-212ENST00000551111 LHX1P48742 406 aa12.36□□□□□ -0.43
PRPF40B-212ENST00000551111 ALCAMQ13740 583 aa12.36□□□□□ -0.43
PRPF40B-212ENST00000551111 FOXD4L6Q3SYB3 417 aaPredicted RBP12.36□□□□□ -0.43
PRPF40B-212ENST00000551111 PPM1JQ5JR12 505 aa12.36□□□□□ -0.43
PRPF40B-212ENST00000551111 CC2D1AQ6P1N0 951 aaPredicted RBP12.36□□□□□ -0.43
PRPF40B-212ENST00000551111 FOXD4L3Q6VB84 417 aaPredicted RBP12.36□□□□□ -0.43
PRPF40B-212ENST00000551111 TRAPPC11Q7Z392 1133 aa12.36□□□□□ -0.43
PRPF40B-212ENST00000551111 NELFCDQ8IXH7 590 aa12.36□□□□□ -0.43
PRPF40B-212ENST00000551111 CCDC65Q8IXS2 484 aa12.36□□□□□ -0.43
PRPF40B-212ENST00000551111 RPLP0P6Q8NHW5 317 aa12.36□□□□□ -0.43
PRPF40B-212ENST00000551111 ZNF507Q8TCN5 953 aa12.36□□□□□ -0.43
PRPF40B-212ENST00000551111 PLEKHO2Q8TD55 490 aa12.36□□□□□ -0.43
PRPF40B-212ENST00000551111 GAB3Q8WWW8 586 aa12.36□□□□□ -0.43
PRPF40B-212ENST00000551111 DHX58Q96C10 678 aa12.36□□□□□ -0.43
PRPF40B-212ENST00000551111 PCED1BQ96HM7 432 aa12.36□□□□□ -0.43
PRPF40B-212ENST00000551111 ANKRD36BP1Q96IX9 119 aa12.36□□□□□ -0.43
PRPF40B-212ENST00000551111 P2RY13Q9BPV8 354 aa12.36□□□□□ -0.43
PRPF40B-212ENST00000551111 TMEM206Q9H813 350 aa12.36□□□□□ -0.43
PRPF40B-212ENST00000551111 KIF9Q9HAQ2 790 aa12.36□□□□□ -0.43
PRPF40B-212ENST00000551111 MAGEC2Q9UBF1 373 aaPredicted RBP12.36□□□□□ -0.43
PRPF40B-212ENST00000551111 UXTQ9UBK9 157 aaPredicted RBP12.36□□□□□ -0.43
PRPF40B-212ENST00000551111 INVSQ9Y283 1065 aa12.36□□□□□ -0.43
PRPF40B-212ENST00000551111 TRAV19A0A0A6YYK7 116 aa12.35□□□□□ -0.43
PRPF40B-212ENST00000551111 CLDN5O00501 218 aa12.35□□□□□ -0.43
PRPF40B-212ENST00000551111 SPTLC2O15270 562 aa12.35□□□□□ -0.43
PRPF40B-212ENST00000551111 RPP40O75818 363 aaKnown RBP12.35□□□□□ -0.43
PRPF40B-212ENST00000551111 USP17L7P0C7H9 530 aa12.35□□□□□ -0.43
PRPF40B-212ENST00000551111 DLATP10515 647 aaKnown RBP12.35□□□□□ -0.43
PRPF40B-212ENST00000551111 HDCP19113 662 aa12.35□□□□□ -0.43
PRPF40B-212ENST00000551111 WARSP23381 471 aaKnown RBP12.35□□□□□ -0.43
PRPF40B-212ENST00000551111 PCSK1P29120 753 aa12.35□□□□□ -0.43
PRPF40B-212ENST00000551111 GRIK1P39086 918 aa12.35□□□□□ -0.43
PRPF40B-212ENST00000551111 OPRD1P41143 372 aa12.35□□□□□ -0.43
PRPF40B-212ENST00000551111 MAGEA11P43364 429 aa12.35□□□□□ -0.43
PRPF40B-212ENST00000551111 CASP4P49662 377 aa12.35□□□□□ -0.43
PRPF40B-212ENST00000551111 CYP2J2P51589 502 aa12.35□□□□□ -0.43
PRPF40B-212ENST00000551111 ASIC1P78348 528 aa12.35□□□□□ -0.43
PRPF40B-212ENST00000551111 CYP27A1Q02318 531 aa12.35□□□□□ -0.43
PRPF40B-212ENST00000551111 EHHADHQ08426 723 aa12.35□□□□□ -0.43
PRPF40B-212ENST00000551111 PDGFRLQ15198 375 aa12.35□□□□□ -0.43
PRPF40B-212ENST00000551111 DUOXA2Q1HG44 320 aa12.35□□□□□ -0.43
PRPF40B-212ENST00000551111 MDH1BQ5I0G3 518 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms