RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 KBTBD13C9JR72 458 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 WDR46O15213 610 aaKnown RBP10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 ICAM1P05362 532 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 HNRNPCP07910 306 aaKnown RBP eCLIP10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 SERPINB9P50453 376 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 HMGCS2P54868 508 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 KCTD2Q14681 263 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 IRGCQ6NXR0 463 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 OTOAQ7RTW8 1153 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 RNF169Q8NCN4 708 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 ZNF317Q96PQ6 595 aaPredicted RBP10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 WRNIP1Q96S55 665 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 GCOM2Q9BZD3 368 aaPredicted RBP10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 QTRT2Q9H974 415 aaKnown RBP10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 C17orf75Q9HAS0 396 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 FBXO6Q9NRD1 293 aaPredicted RBP10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 GPATCH2LQ9NWQ4 482 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 VAV3Q9UKW4 847 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 ACTL7BQ9Y614 415 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 MEI4A8MW99 385 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 E7ENQ6 273 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 SMAPO00193 183 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 CYP3A4P08684 503 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 VIL1P09327 827 aaKnown RBP10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 ADORA2BP29275 332 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 CCNHP51946 323 aaPredicted RBP10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 TAS2R40P59535 323 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 MYL6P60660 151 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 C1QBPQ07021 282 aaKnown RBP10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 ZCCHC23Q6ZST2 131 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 TMPRSS6Q8IU80 811 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 SLC9A9Q8IVB4 645 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 C4orf19Q8IY42 314 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 LRRC71Q8N4P6 559 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 CERS5Q8N5B7 392 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 FAM151AQ8WW52 585 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 SEMA4DQ92854 862 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 NMD3Q96D46 503 aaKnown RBP10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 AGO4Q9HCK5 861 aaKnown RBP10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 CISHQ9NSE2 258 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 TAGLN3Q9UI15 199 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 CORO1CQ9ULV4 474 aaPredicted RBP10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 DNAJC16Q9Y2G8 782 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 TMX2Q9Y320 296 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 RNF103-CHMP3A0A140T963 221 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 EDF1O60869 148 aaKnown RBP10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 PSMG1O95456 288 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 YY1P25490 414 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 EFNA5P52803 228 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 TRMT5Q32P41 509 aaKnown RBP10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 NBPF20Q3BBV1 942 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 TMEM259Q4ZIN3 620 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 LCA5Q86VQ0 697 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 RNF135Q8IUD6 432 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 SRPK1Q96SB4 655 aaKnown RBP10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 DDX50Q9BQ39 737 aaKnown RBP10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 ACAD9Q9H845 621 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 ZNF711Q9Y462 761 aa10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 BAZ2AQ9UIF9 1905 aaKnown RBP10.65□□□□□ -0.7
SMARCC2-209ENST00000550164 MYH15Q9Y2K3 1946 aa10.65□□□□□ -0.71
SMARCC2-209ENST00000550164 FAM237BA0A1B0GVD1 139 aa10.65□□□□□ -0.71
SMARCC2-209ENST00000550164 SNHG28P0DPA3 235 aa10.65□□□□□ -0.71
SMARCC2-209ENST00000550164 ATP6V1C1P21283 382 aa10.65□□□□□ -0.71
SMARCC2-209ENST00000550164 RPL7AP62424 266 aaKnown RBP10.65□□□□□ -0.71
SMARCC2-209ENST00000550164 RPL10AP62906 217 aaKnown RBP10.65□□□□□ -0.71
SMARCC2-209ENST00000550164 PRAMEP78395 509 aa10.65□□□□□ -0.71
SMARCC2-209ENST00000550164 CDK16Q00536 496 aa10.65□□□□□ -0.71
SMARCC2-209ENST00000550164 LAMB3Q13751 1172 aa10.65□□□□□ -0.71
SMARCC2-209ENST00000550164 KATNAL2Q8IYT4 538 aa10.65□□□□□ -0.71
SMARCC2-209ENST00000550164 EME1Q96AY2 570 aa10.65□□□□□ -0.71
SMARCC2-209ENST00000550164 ZBTB45Q96K62 511 aaPredicted RBP10.65□□□□□ -0.71
SMARCC2-209ENST00000550164 ZNF184Q99676 751 aaPredicted RBP10.65□□□□□ -0.71
SMARCC2-209ENST00000550164 C12orf65Q9H3J6 166 aaKnown RBP10.65□□□□□ -0.71
SMARCC2-209ENST00000550164 FAM49BQ9NUQ9 324 aa10.65□□□□□ -0.71
SMARCC2-209ENST00000550164 SRGAP2BP0DMP2 458 aa10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 LCP1P13796 627 aa10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 NLRP11P59045 1033 aaKnown RBP10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 KBTBD12Q3ZCT8 623 aa10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 TRIM67Q6ZTA4 783 aa10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 PTF1AQ7RTS3 328 aa10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 ATG4CQ96DT6 458 aa10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 FAM49AQ9H0Q0 323 aaPredicted RBP10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 TRPC5Q9UL62 973 aaPredicted RBP10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 MAPTP10636 758 aaKnown RBP10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 SKIV2L2P42285 1042 aaKnown RBP10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 NME3Q13232 169 aa10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 MAMLD1Q13495 774 aa10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 SLC1A5Q15758 541 aa10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 KIF19Q2TAC6 998 aa10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 FASTKD1Q53R41 847 aaKnown RBP10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 APLFQ8IW19 511 aaPredicted RBP10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 CYP4X1Q8N118 509 aa10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 FAM167AQ96KS9 214 aa10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 SLC12A4Q9UP95 1085 aa10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 DTNAQ9Y4J8 743 aa10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 PCDHA2Q9Y5H9 948 aa10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 ARFGEF2Q9Y6D5 1785 aa10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 LIASO43766 372 aa10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 PDE5AO76074 875 aa10.64□□□□□ -0.71
SMARCC2-209ENST00000550164 GPD1P21695 349 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms