RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 ZNF143P52747 638 aaPredicted RBP18.82■□□□□ 0.6
GNE-204ENST00000539208 NDST1P52848 882 aa18.82■□□□□ 0.6
GNE-204ENST00000539208 MICALL1Q8N3F8 863 aa18.82■□□□□ 0.6
GNE-204ENST00000539208 ACTL9Q8TC94 416 aa18.82■□□□□ 0.6
GNE-204ENST00000539208 TMEM121Q9BTD3 319 aa18.82■□□□□ 0.6
GNE-204ENST00000539208 SAYSD1Q9NPB0 183 aa18.82■□□□□ 0.6
GNE-204ENST00000539208 NAALADL1Q9UQQ1 740 aa18.82■□□□□ 0.6
GNE-204ENST00000539208 SCN4AP35499 1836 aa18.82■□□□□ 0.6
GNE-204ENST00000539208 TMEM120BA0PK00 339 aa18.82■□□□□ 0.6
GNE-204ENST00000539208 GLTPD2A6NH11 291 aa18.82■□□□□ 0.6
GNE-204ENST00000539208 SGK1O00141 431 aa18.82■□□□□ 0.6
GNE-204ENST00000539208 ALOX15BO15296 676 aa18.82■□□□□ 0.6
GNE-204ENST00000539208 CST8O60676 142 aa18.82■□□□□ 0.6
GNE-204ENST00000539208 TRUB2O95900 331 aaKnown RBP18.82■□□□□ 0.6
GNE-204ENST00000539208 SMPD1P17405 629 aa18.82■□□□□ 0.6
GNE-204ENST00000539208 MIPP30301 263 aa18.82■□□□□ 0.6
GNE-204ENST00000539208 CDC42EP1Q00587 391 aa18.82■□□□□ 0.6
GNE-204ENST00000539208 OTUD4Q01804 1114 aaKnown RBP18.82■□□□□ 0.6
GNE-204ENST00000539208 GRB14Q14449 540 aa18.82■□□□□ 0.6
GNE-204ENST00000539208 SMTNL2Q2TAL5 461 aa18.82■□□□□ 0.6
GNE-204ENST00000539208 KCNT1Q5JUK3 1230 aa18.82■□□□□ 0.6
GNE-204ENST00000539208 IQSEC1Q6DN90 963 aa18.82■□□□□ 0.6
GNE-204ENST00000539208 APBB1IPQ7Z5R6 666 aaPredicted RBP18.82■□□□□ 0.6
GNE-204ENST00000539208 HAUS1Q96CS2 278 aa18.82■□□□□ 0.6
GNE-204ENST00000539208 NT5C1AQ9BXI3 368 aa18.82■□□□□ 0.6
GNE-204ENST00000539208 CTNNAL1Q9UBT7 734 aa18.82■□□□□ 0.6
GNE-204ENST00000539208 CCL15-CCL14A0A0B4J2E2 113 aa18.81■□□□□ 0.6
GNE-204ENST00000539208 CCL15Q16663 113 aa18.81■□□□□ 0.6
GNE-204ENST00000539208 DGKDQ16760 1214 aa18.81■□□□□ 0.6
GNE-204ENST00000539208 RNF187Q5TA31 235 aaPredicted RBP18.81■□□□□ 0.6
GNE-204ENST00000539208 CCDC121Q6ZUS5 278 aa18.81■□□□□ 0.6
GNE-204ENST00000539208 GPR142Q7Z601 462 aa18.81■□□□□ 0.6
GNE-204ENST00000539208 DPP9Q86TI2 863 aa18.81■□□□□ 0.6
GNE-204ENST00000539208 PNMA8AQ86V59 439 aaPredicted RBP18.81■□□□□ 0.6
GNE-204ENST00000539208 TDRPQ86YL5 185 aa18.81■□□□□ 0.6
GNE-204ENST00000539208 KCTD6Q8NC69 237 aa18.81■□□□□ 0.6
GNE-204ENST00000539208 KIF12Q96FN5 646 aa18.81■□□□□ 0.6
GNE-204ENST00000539208 MAML3Q96JK9 1138 aa18.81■□□□□ 0.6
GNE-204ENST00000539208 ABHD16BQ9H3Z7 469 aa18.81■□□□□ 0.6
GNE-204ENST00000539208 USP18Q9UMW8 372 aa18.81■□□□□ 0.6
GNE-204ENST00000539208 FARP1Q9Y4F1 1045 aaPredicted RBP18.81■□□□□ 0.6
GNE-204ENST00000539208 IQCA1LA6NCM1 817 aa18.81■□□□□ 0.6
GNE-204ENST00000539208 RRN3P2A6NIE6 340 aa18.81■□□□□ 0.6
GNE-204ENST00000539208 ENDOD1O94919 500 aa18.81■□□□□ 0.6
GNE-204ENST00000539208 NR1H3Q13133 447 aa18.81■□□□□ 0.6
GNE-204ENST00000539208 FAM102AQ5T9C2 384 aaPredicted RBP18.81■□□□□ 0.6
GNE-204ENST00000539208 LRRC34Q8IZ02 419 aa18.81■□□□□ 0.6
GNE-204ENST00000539208 CYP4X1Q8N118 509 aa18.81■□□□□ 0.6
GNE-204ENST00000539208 BRI3BPQ8WY22 251 aa18.81■□□□□ 0.6
GNE-204ENST00000539208 PRCCQ92733 491 aaPredicted RBP18.81■□□□□ 0.6
GNE-204ENST00000539208 CNPY3Q9BT09 278 aa18.81■□□□□ 0.6
GNE-204ENST00000539208 ADAMTS10Q9H324 1103 aa18.81■□□□□ 0.6
GNE-204ENST00000539208 PPCSQ9HAB8 311 aa18.81■□□□□ 0.6
GNE-204ENST00000539208 APOC4-APOC2K7ER74 178 aa18.8■□□□□ 0.6
GNE-204ENST00000539208 APOC2P02655 101 aa18.8■□□□□ 0.6
GNE-204ENST00000539208 CYP3A5P20815 502 aa18.8■□□□□ 0.6
GNE-204ENST00000539208 CENPUQ71F23 418 aa18.8■□□□□ 0.6
GNE-204ENST00000539208 CCDC197Q8NCU1 140 aa18.8■□□□□ 0.6
GNE-204ENST00000539208 UBA3Q8TBC4 463 aa18.8■□□□□ 0.6
GNE-204ENST00000539208 MAML1Q92585 1016 aa18.8■□□□□ 0.6
GNE-204ENST00000539208 TINF2Q9BSI4 451 aa18.8■□□□□ 0.6
GNE-204ENST00000539208 NSRP1Q9H0G5 558 aaKnown RBP18.8■□□□□ 0.6
GNE-204ENST00000539208 ACTR5Q9H9F9 607 aaPredicted RBP18.8■□□□□ 0.6
GNE-204ENST00000539208 RSAD1Q9HA92 442 aa18.8■□□□□ 0.6
GNE-204ENST00000539208 CITO14578 2027 aa18.79■□□□□ 0.6
GNE-204ENST00000539208 C2CD4BA6NLJ0 364 aa18.79■□□□□ 0.6
GNE-204ENST00000539208 SMAPO00193 183 aa18.79■□□□□ 0.6
GNE-204ENST00000539208 BRAFP15056 766 aa18.79■□□□□ 0.6
GNE-204ENST00000539208 CREB1P16220 341 aa18.79■□□□□ 0.6
GNE-204ENST00000539208 GPD1P21695 349 aa18.79■□□□□ 0.6
GNE-204ENST00000539208 RDXP35241 583 aaKnown RBP18.79■□□□□ 0.6
GNE-204ENST00000539208 ACVR2BQ13705 512 aa18.79■□□□□ 0.6
GNE-204ENST00000539208 ITIH4Q14624 930 aa18.79■□□□□ 0.6
GNE-204ENST00000539208 PCBP1Q15365 356 aaKnown RBP eCLIP18.79■□□□□ 0.6
GNE-204ENST00000539208 TTC31Q49AM3 519 aaPredicted RBP18.79■□□□□ 0.6
GNE-204ENST00000539208 CYP4F22Q6NT55 531 aa18.79■□□□□ 0.6
GNE-204ENST00000539208 OR6J1Q8NGC5 347 aa18.79■□□□□ 0.6
GNE-204ENST00000539208 PCSK1NQ9UHG2 260 aa18.79■□□□□ 0.6
GNE-204ENST00000539208 TSPAN16Q9UKR8 245 aa18.79■□□□□ 0.6
GNE-204ENST00000539208 IFNB1P01574 187 aa18.79■□□□□ 0.6
GNE-204ENST00000539208 PFKMP08237 780 aa18.79■□□□□ 0.6
GNE-204ENST00000539208 CD48P09326 243 aa18.79■□□□□ 0.6
GNE-204ENST00000539208 HOXA11P31270 313 aaPredicted RBP18.79■□□□□ 0.6
GNE-204ENST00000539208 DYNLT1P63172 113 aa18.79■□□□□ 0.6
GNE-204ENST00000539208 ACTN3Q08043 901 aaPredicted RBP18.79■□□□□ 0.6
GNE-204ENST00000539208 RASA2Q15283 850 aa18.79■□□□□ 0.6
GNE-204ENST00000539208 LACTB2Q53H82 288 aaPredicted RBP18.79■□□□□ 0.6
GNE-204ENST00000539208 PPIL6Q8IXY8 311 aa18.79■□□□□ 0.6
GNE-204ENST00000539208 ANKS4BQ8N8V4 417 aa18.79■□□□□ 0.6
GNE-204ENST00000539208 GBA2Q9HCG7 927 aaPredicted RBP18.79■□□□□ 0.6
GNE-204ENST00000539208 RALGAPA2Q2PPJ7 1873 aa18.78■□□□□ 0.6
GNE-204ENST00000539208 ZBTB6Q15916 424 aa18.78■□□□□ 0.6
GNE-204ENST00000539208 CHADLQ6NUI6 762 aa18.78■□□□□ 0.6
GNE-204ENST00000539208 SLC27A1Q6PCB7 646 aa18.78■□□□□ 0.6
GNE-204ENST00000539208 GCOM2Q9BZD3 368 aaPredicted RBP18.78■□□□□ 0.6
GNE-204ENST00000539208 OSBPL7Q9BZF2 842 aa18.78■□□□□ 0.6
GNE-204ENST00000539208 KDM4CQ9H3R0 1056 aa18.78■□□□□ 0.6
GNE-204ENST00000539208 UBN1Q9NPG3 1134 aa18.78■□□□□ 0.6
GNE-204ENST00000539208 SAE1Q9UBE0 346 aaPredicted RBP18.78■□□□□ 0.6
GNE-204ENST00000539208 GOLGA6L7A0A1B0GV03 622 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms