RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 GADD45GIP1Q8TAE8 222 aaPredicted RBP1.17□□□□□ -2.22
COPB1-212ENST00000534771 OSR1Q8TAX0 266 aaPredicted RBP1.17□□□□□ -2.22
COPB1-212ENST00000534771 RAB24Q969Q5 203 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 HDAC10Q969S8 669 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 MFSD3Q96ES6 412 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 AHCYL2Q96HN2 611 aaKnown RBP1.17□□□□□ -2.22
COPB1-212ENST00000534771 ZFYVE19Q96K21 471 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 CLPTM1LQ96KA5 538 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 FAM84BQ96KN1 310 aaPredicted RBP1.17□□□□□ -2.22
COPB1-212ENST00000534771 LMLNQ96KR4 655 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 MRGPRX4Q96LA9 322 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 MMS19Q96T76 1030 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 DNAJC2Q99543 621 aaKnown RBP1.17□□□□□ -2.22
COPB1-212ENST00000534771 MEIS3Q99687 375 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 TMEM204Q9BSN7 226 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 CNPPD1Q9BV87 410 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 DPCDQ9BVM2 203 aaPredicted RBP1.17□□□□□ -2.22
COPB1-212ENST00000534771 ZSWIM4Q9H7M6 989 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 GLOD4Q9HC38 313 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 VTA1Q9NP79 307 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 GNL3LQ9NVN8 582 aaKnown RBP1.17□□□□□ -2.22
COPB1-212ENST00000534771 RLIMQ9NVW2 624 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 FANCLQ9NW38 375 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 C14orf119Q9NWQ9 140 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 CFAP97Q9P2B7 532 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 AGAP1Q9UPQ3 857 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 GPR45Q9Y5Y3 372 aa1.17□□□□□ -2.22
COPB1-212ENST00000534771 FNDC1Q4ZHG4 1894 aaPredicted RBP1.17□□□□□ -2.22
COPB1-212ENST00000534771 A0A087X0B3 334 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 PRSS29PA6NIE9 313 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 ZNF785A8K8V0 405 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 F2RL2O00254 374 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 ACOT8O14734 319 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 BRINP1O60477 761 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 GCATO75600 419 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 TJP3O95049 919 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 GJB1P08034 283 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 CTSAP10619 480 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 MYCLP12524 364 aaPredicted RBP1.16□□□□□ -2.22
COPB1-212ENST00000534771 AZU1P20160 251 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 MALP21145 153 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 AGXTP21549 392 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 SMARCA1P28370 1054 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 TNFRSF8P28908 595 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 RENBPP51606 427 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 ZNF135P52742 658 aaPredicted RBP1.16□□□□□ -2.22
COPB1-212ENST00000534771 RPS13P62277 151 aaKnown RBP1.16□□□□□ -2.22
COPB1-212ENST00000534771 TLE1Q04724 770 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 TCF15Q12870 199 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 STRN3Q13033 797 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 E2F2Q14209 437 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 SF3A1Q15459 793 aaKnown RBP1.16□□□□□ -2.22
COPB1-212ENST00000534771 KHDC1Q4VXA5 237 aaKnown RBP1.16□□□□□ -2.22
COPB1-212ENST00000534771 MANEAQ5SRI9 462 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 CAPRIN2Q6IMN6 1127 aaKnown RBP1.16□□□□□ -2.22
COPB1-212ENST00000534771 ANO7Q6IWH7 933 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 PDXDC1Q6P996 788 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 LAYNQ6UX15 382 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 NR2C2APQ86WQ0 139 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 LIX1LQ8IVB5 337 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 SLC15A3Q8IY34 581 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 MMP21Q8N119 569 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 B4GALNT2Q8NHY0 566 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 MPLKIPQ8TAP9 179 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 ZNF398Q8TD17 642 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 DDX17Q92841 729 aaKnown RBP1.16□□□□□ -2.22
COPB1-212ENST00000534771 GLG1Q92896 1179 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 MAP4K1Q92918 833 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 LENG8Q96PV6 779 aaPredicted RBP1.16□□□□□ -2.22
COPB1-212ENST00000534771 DMRTA2Q96SC8 542 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 VRK1Q99986 396 aaPredicted RBP1.16□□□□□ -2.22
COPB1-212ENST00000534771 NTPCRQ9BSD7 190 aaKnown RBP1.16□□□□□ -2.22
COPB1-212ENST00000534771 THAP7Q9BT49 309 aaPredicted RBP1.16□□□□□ -2.22
COPB1-212ENST00000534771 CIPCQ9C0C6 399 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 GPR35Q9HC97 309 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 GJB4Q9NTQ9 266 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 CCM2LQ9NUG4 571 aaPredicted RBP1.16□□□□□ -2.22
COPB1-212ENST00000534771 MRPS18AQ9NVS2 196 aaKnown RBP1.16□□□□□ -2.22
COPB1-212ENST00000534771 SELENONQ9NZV5 590 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 NIPSNAP3AQ9UFN0 247 aaPredicted RBP1.16□□□□□ -2.22
COPB1-212ENST00000534771 MCM8Q9UJA3 840 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 SERTAD3Q9UJW9 196 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 APOBEC2Q9Y235 224 aaKnown RBP1.16□□□□□ -2.22
COPB1-212ENST00000534771 CACNA1IQ9P0X4 2223 aa1.16□□□□□ -2.22
COPB1-212ENST00000534771 IGLV5-39A0A0G2JS06 123 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 AP4M1O00189 453 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 CNOT3O75175 753 aaKnown RBP1.15□□□□□ -2.23
COPB1-212ENST00000534771 RNF8O76064 485 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 CAMTA2O94983 1202 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 MT-CO3P00414 261 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 GNAI2P04899 355 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 PRKCBP05771 671 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 NGFRP08138 427 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 RARBP10826 455 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 PXNP49023 591 aaPredicted RBP1.15□□□□□ -2.23
COPB1-212ENST00000534771 SLC16A1P53985 500 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 TPTEP56180 551 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 SNAPC2Q13487 334 aa1.15□□□□□ -2.23
COPB1-212ENST00000534771 STIM1Q13586 685 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms