RNA–Protein interactions for RNA: ENST00000530279.5

C11orf54-208, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-208ENST00000530279 MLC1Q15049 377 aa4.49□□□□□ -1.69
C11orf54-208ENST00000530279 PWP2Q15269 919 aaKnown RBP4.49□□□□□ -1.69
C11orf54-208ENST00000530279 EPHA7Q15375 998 aa4.49□□□□□ -1.69
C11orf54-208ENST00000530279 IMMTQ16891 758 aaKnown RBP4.49□□□□□ -1.69
C11orf54-208ENST00000530279 TREML2Q5T2D2 321 aa4.49□□□□□ -1.69
C11orf54-208ENST00000530279 TIGD7Q6NT04 549 aaPredicted RBP4.49□□□□□ -1.69
C11orf54-208ENST00000530279 CASC1Q6TDU7 716 aa4.49□□□□□ -1.69
C11orf54-208ENST00000530279 MFSD6Q6ZSS7 791 aa4.49□□□□□ -1.69
C11orf54-208ENST00000530279 KCTD1Q719H9 257 aa4.49□□□□□ -1.69
C11orf54-208ENST00000530279 RALYLQ86SE5 291 aaKnown RBP4.49□□□□□ -1.69
C11orf54-208ENST00000530279 FAM160B2Q86V87 743 aa4.49□□□□□ -1.69
C11orf54-208ENST00000530279 IQCA1Q86XH1 822 aa4.49□□□□□ -1.69
C11orf54-208ENST00000530279 DGKHQ86XP1 1220 aa4.49□□□□□ -1.69
C11orf54-208ENST00000530279 MSL3Q8N5Y2 521 aaKnown RBP4.49□□□□□ -1.69
C11orf54-208ENST00000530279 CLRN3Q8NCR9 226 aa4.49□□□□□ -1.69
C11orf54-208ENST00000530279 SLC44A5Q8NCS7 719 aa4.49□□□□□ -1.69
C11orf54-208ENST00000530279 ACER1Q8TDN7 264 aa4.49□□□□□ -1.69
C11orf54-208ENST00000530279 COG1Q8WTW3 980 aa4.49□□□□□ -1.69
C11orf54-208ENST00000530279 CHURC1Q8WUH1 139 aa4.49□□□□□ -1.69
C11orf54-208ENST00000530279 JPH3Q8WXH2 748 aaPredicted RBP4.49□□□□□ -1.69
C11orf54-208ENST00000530279 ESR2Q92731 530 aa4.49□□□□□ -1.69
C11orf54-208ENST00000530279 DPF3Q92784 378 aa4.49□□□□□ -1.69
C11orf54-208ENST00000530279 RILPL2Q969X0 211 aa4.49□□□□□ -1.69
C11orf54-208ENST00000530279 DYNLL2Q96FJ2 89 aa4.49□□□□□ -1.69
C11orf54-208ENST00000530279 MAML3Q96JK9 1138 aa4.49□□□□□ -1.69
C11orf54-208ENST00000530279 FAM227BQ96M60 508 aa4.49□□□□□ -1.69
C11orf54-208ENST00000530279 SEC62Q99442 399 aaKnown RBP4.49□□□□□ -1.69
C11orf54-208ENST00000530279 P2RX7Q99572 595 aaKnown RBP4.49□□□□□ -1.69
C11orf54-208ENST00000530279 KRT23Q9C075 422 aa4.49□□□□□ -1.69
C11orf54-208ENST00000530279 ZDHHC5Q9C0B5 715 aa4.49□□□□□ -1.69
C11orf54-208ENST00000530279 MROH8Q9H579 483 aa4.49□□□□□ -1.69
C11orf54-208ENST00000530279 SLC2A4RGQ9NR83 387 aa4.49□□□□□ -1.69
C11orf54-208ENST00000530279 RBPJLQ9UBG7 517 aa4.49□□□□□ -1.69
C11orf54-208ENST00000530279 NRBP1Q9UHY1 535 aa4.49□□□□□ -1.69
C11orf54-208ENST00000530279 FEM1BQ9UK73 627 aa4.49□□□□□ -1.69
C11orf54-208ENST00000530279 GJD2Q9UKL4 321 aa4.49□□□□□ -1.69
C11orf54-208ENST00000530279 B3GALT1Q9Y5Z6 326 aa4.49□□□□□ -1.69
C11orf54-208ENST00000530279 SIPA1L1O43166 1804 aa4.49□□□□□ -1.69
C11orf54-208ENST00000530279 PHIPQ8WWQ0 1821 aa4.49□□□□□ -1.69
C11orf54-208ENST00000530279 TMEM191CA6NGB0 347 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 TSPY2A6NKD2 308 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 F5H6K3 240 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 MPHOSPH10O00566 681 aaKnown RBP4.48□□□□□ -1.69
C11orf54-208ENST00000530279 ZNF213O14771 459 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 TNPO2O14787 897 aaKnown RBP4.48□□□□□ -1.69
C11orf54-208ENST00000530279 ABLIM3O94929 683 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 NUDT3O95989 172 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 NDUFB10O96000 172 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 CHGBP05060 677 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 RBP3P10745 1247 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 TOP1P11387 765 aaKnown RBP4.48□□□□□ -1.69
C11orf54-208ENST00000530279 CDK4P11802 303 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 GSPT1P15170 499 aaKnown RBP4.48□□□□□ -1.69
C11orf54-208ENST00000530279 FPR2P25090 351 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 ACRV1P26436 265 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 SDHAP31040 664 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 EPHA5P54756 1037 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 ERVK-21P61565 698 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 UBXN2AP68543 259 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 SMAD3P84022 425 aaKnown RBP4.48□□□□□ -1.69
C11orf54-208ENST00000530279 TFAP4Q01664 338 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 KLRC3Q07444 240 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 TRDNQ13061 729 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 TRAF1Q13077 416 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 SMAD2Q15796 467 aaKnown RBP4.48□□□□□ -1.69
C11orf54-208ENST00000530279 SLC9C1Q4G0N8 1177 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 GPATCH4Q5T3I0 446 aaKnown RBP4.48□□□□□ -1.69
C11orf54-208ENST00000530279 TRMT10BQ6PF06 316 aaKnown RBP4.48□□□□□ -1.69
C11orf54-208ENST00000530279 CWC27Q6UX04 472 aaKnown RBP4.48□□□□□ -1.69
C11orf54-208ENST00000530279 BTNL9Q6UXG8 535 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 Q6ZPA2 131 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 ESPNLQ6ZVH7 1005 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.48□□□□□ -1.69
C11orf54-208ENST00000530279 ZNF589Q86UQ0 364 aaPredicted RBP4.48□□□□□ -1.69
C11orf54-208ENST00000530279 PTRH1Q86Y79 214 aaKnown RBP4.48□□□□□ -1.69
C11orf54-208ENST00000530279 PHYKPLQ8IUZ5 450 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 TMTC2Q8N394 836 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 ANKRD13CQ8N6S4 541 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 C7orf31Q8N865 590 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 C1orf162Q8NEQ5 155 aaPredicted RBP4.48□□□□□ -1.69
C11orf54-208ENST00000530279 PIP4K2CQ8TBX8 421 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 CD99L2Q8TCZ2 262 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 RAET1EQ8TD07 263 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 PLEKHO2Q8TD55 490 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 RSAD2Q8WXG1 361 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 USP6NLQ92738 828 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 MAP4K1Q92918 833 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 CEP95Q96GE4 821 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 FAXDC2Q96IV6 333 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 ZNF333Q96JL9 665 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 RPAP3Q9H6T3 665 aaPredicted RBP4.48□□□□□ -1.69
C11orf54-208ENST00000530279 SMURF1Q9HCE7 757 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 C14orf119Q9NWQ9 140 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 PPARGC1AQ9UBK2 798 aaKnown RBP4.48□□□□□ -1.69
C11orf54-208ENST00000530279 FBXO40Q9UH90 709 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 CPA4Q9UI42 421 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 REXO2Q9Y3B8 237 aaKnown RBP4.48□□□□□ -1.69
C11orf54-208ENST00000530279 PCDHB4Q9Y5E5 795 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 LOC285556D6RIA3 1793 aa4.48□□□□□ -1.69
C11orf54-208ENST00000530279 TNKSO95271 1327 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms