RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 CAMK2BQ13554 666 aa10.65□□□□□ -0.7
SPIDR-224ENST00000524126 PSMD6Q15008 389 aa10.65□□□□□ -0.7
SPIDR-224ENST00000524126 PRKD1Q15139 912 aaPredicted RBP10.65□□□□□ -0.7
SPIDR-224ENST00000524126 CYTH1Q15438 398 aa10.65□□□□□ -0.7
SPIDR-224ENST00000524126 ZNF423Q2M1K9 1284 aa10.65□□□□□ -0.7
SPIDR-224ENST00000524126 DNAL1Q4LDG9 190 aa10.65□□□□□ -0.7
SPIDR-224ENST00000524126 TCHHL1Q5QJ38 904 aaPredicted RBP10.65□□□□□ -0.7
SPIDR-224ENST00000524126 C6orf52Q5T4I8 152 aa10.65□□□□□ -0.7
SPIDR-224ENST00000524126 NEPROQ6NW34 567 aa10.65□□□□□ -0.7
SPIDR-224ENST00000524126 KYAT3Q6YP21 454 aaKnown RBP10.65□□□□□ -0.7
SPIDR-224ENST00000524126 DCDC5Q6ZRR9 648 aa10.65□□□□□ -0.7
SPIDR-224ENST00000524126 LPCAT2Q7L5N7 544 aa10.65□□□□□ -0.7
SPIDR-224ENST00000524126 PASD1Q8IV76 773 aa10.65□□□□□ -0.7
SPIDR-224ENST00000524126 GALNT4Q8N4A0 578 aa10.65□□□□□ -0.7
SPIDR-224ENST00000524126 GLIS1Q8NBF1 620 aa10.65□□□□□ -0.7
SPIDR-224ENST00000524126 PYROXD1Q8WU10 500 aa10.65□□□□□ -0.7
SPIDR-224ENST00000524126 PSPC1Q8WXF1 523 aaKnown RBP10.65□□□□□ -0.7
SPIDR-224ENST00000524126 AGPAT1Q99943 283 aa10.65□□□□□ -0.7
SPIDR-224ENST00000524126 SHCBP1LQ9BZQ2 653 aa10.65□□□□□ -0.7
SPIDR-224ENST00000524126 NDEL1Q9GZM8 345 aa10.65□□□□□ -0.7
SPIDR-224ENST00000524126 CYP4F11Q9HBI6 524 aa10.65□□□□□ -0.7
SPIDR-224ENST00000524126 SERPINA10Q9UK55 444 aa10.65□□□□□ -0.7
SPIDR-224ENST00000524126 KIAA1024Q9UPX6 916 aa10.65□□□□□ -0.7
SPIDR-224ENST00000524126 TMA7Q9Y2S6 64 aaKnown RBP10.65□□□□□ -0.7
SPIDR-224ENST00000524126 GPC6Q9Y625 555 aaPredicted RBP10.65□□□□□ -0.7
SPIDR-224ENST00000524126 AP4B1Q9Y6B7 739 aa10.65□□□□□ -0.7
SPIDR-224ENST00000524126 IVNS1ABPQ9Y6Y0 642 aa10.65□□□□□ -0.7
SPIDR-224ENST00000524126 POTECB2RU33 542 aa10.65□□□□□ -0.71
SPIDR-224ENST00000524126 FOXN3O00409 490 aaPredicted RBP10.65□□□□□ -0.71
SPIDR-224ENST00000524126 TNFAIP8O95379 198 aa10.65□□□□□ -0.71
SPIDR-224ENST00000524126 MMP10P09238 476 aa10.65□□□□□ -0.71
SPIDR-224ENST00000524126 PLA2G4BP0C869 781 aa10.65□□□□□ -0.71
SPIDR-224ENST00000524126 CPOXP36551 454 aa10.65□□□□□ -0.71
SPIDR-224ENST00000524126 PHKA2P46019 1235 aa10.65□□□□□ -0.71
SPIDR-224ENST00000524126 ALDH1A3P47895 512 aa10.65□□□□□ -0.71
SPIDR-224ENST00000524126 GPC5P78333 572 aa10.65□□□□□ -0.71
SPIDR-224ENST00000524126 CAV1Q03135 178 aa10.65□□□□□ -0.71
SPIDR-224ENST00000524126 MTM1Q13496 603 aa10.65□□□□□ -0.71
SPIDR-224ENST00000524126 OASLQ15646 514 aaKnown RBP10.65□□□□□ -0.71
SPIDR-224ENST00000524126 TDRPQ86YL5 185 aa10.65□□□□□ -0.71
SPIDR-224ENST00000524126 ANKMY2Q8IV38 441 aa10.65□□□□□ -0.71
SPIDR-224ENST00000524126 CENPSQ8N2Z9 138 aa10.65□□□□□ -0.71
SPIDR-224ENST00000524126 RAB3IL1Q8TBN0 382 aa10.65□□□□□ -0.71
SPIDR-224ENST00000524126 GRIN3AQ8TCU5 1115 aa10.65□□□□□ -0.71
SPIDR-224ENST00000524126 BTBD9Q96Q07 612 aa10.65□□□□□ -0.71
SPIDR-224ENST00000524126 GPATCH1Q9BRR8 931 aaKnown RBP10.65□□□□□ -0.71
SPIDR-224ENST00000524126 PAIP1Q9H074 479 aaKnown RBP10.65□□□□□ -0.71
SPIDR-224ENST00000524126 GBA3Q9H227 469 aa10.65□□□□□ -0.71
SPIDR-224ENST00000524126 BMP2KQ9NSY1 1161 aaPredicted RBP10.65□□□□□ -0.71
SPIDR-224ENST00000524126 SENP1Q9P0U3 644 aa10.65□□□□□ -0.71
SPIDR-224ENST00000524126 PSMC3IPQ9P2W1 217 aaPredicted RBP10.65□□□□□ -0.71
SPIDR-224ENST00000524126 ZNF804BA4D1E1 1349 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 MYO3BQ8WXR4 1341 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 A0A1W2PQ67 120 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 POTEB3A0JP26 581 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 USP17L3A6NCW0 530 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 USP17L4A6NCW7 530 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 H3BNX3 289 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 DENRO43583 198 aaKnown RBP10.64□□□□□ -0.71
SPIDR-224ENST00000524126 NR3C1P04150 777 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 POLR2MP0CAP2 368 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 ZSCAN5DPP0CG00 497 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 CPA3P15088 417 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 HADHBP55084 474 aaKnown RBP10.64□□□□□ -0.71
SPIDR-224ENST00000524126 XIAPP98170 497 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 PEX6Q13608 980 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 GRM4Q14833 912 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 CNGA3Q16281 694 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 SYCP2LQ5T4T6 812 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 POTEBQ6S5H4 581 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 USP17L1Q7RTZ2 530 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 ZBTB46Q86UZ6 589 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 ZNF564Q8TBZ8 553 aaPredicted RBP10.64□□□□□ -0.71
SPIDR-224ENST00000524126 ACTRT2Q8TDY3 377 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 STARD8Q92502 1023 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 ATP6V0A1Q93050 837 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 FAM111AQ96PZ2 611 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 ZNF696Q9H7X3 374 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 UVRAGQ9P2Y5 699 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 GIT1Q9Y2X7 761 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 TNS1Q9HBL0 1735 aaKnown RBP10.64□□□□□ -0.71
SPIDR-224ENST00000524126 ANKRD31Q8N7Z5 1873 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 TRIM49P0CI25 452 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 TRIM49CP0CI26 452 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 ACADVLP49748 655 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 PDAP1Q13442 181 aaKnown RBP10.64□□□□□ -0.71
SPIDR-224ENST00000524126 GRAPQ13588 217 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 SPIDRQ14159 915 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 CBWD6Q4V339 395 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 CBWD3Q5JTY5 395 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 CBWD5Q5RIA9 395 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 ALDH16A1Q8IZ83 802 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 GRAPLQ8TC17 118 aaPredicted RBP10.64□□□□□ -0.71
SPIDR-224ENST00000524126 RPGRQ92834 1020 aaKnown RBP10.64□□□□□ -0.71
SPIDR-224ENST00000524126 TRIM11Q96F44 468 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 PCDHB18PQ96TA0 734 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 PACSIN3Q9UKS6 424 aa10.64□□□□□ -0.71
SPIDR-224ENST00000524126 ASTN1O14525 1302 aa10.63□□□□□ -0.71
SPIDR-224ENST00000524126 CCDC195A0A1B0GUA6 201 aa10.63□□□□□ -0.71
SPIDR-224ENST00000524126 DGKIO75912 1065 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms