RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 RNF223E7ERA6 249 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 SLCO1B7G3V0H7 640 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 BTN3A1O00481 513 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 HGSO14964 777 aaPredicted RBP6.84□□□□□ -1.31
SDC2-208ENST00000523877 ECE2O60344 883 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 FMO6PO60774 539 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 ATP9AO75110 1047 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 GMNNO75496 209 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 TNFRSF21O75509 655 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 SURF6O75683 361 aaKnown RBP6.84□□□□□ -1.31
SDC2-208ENST00000523877 DNAJB5O75953 348 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 PGM3O95394 542 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 CD2BP2O95400 341 aaKnown RBP6.84□□□□□ -1.31
SDC2-208ENST00000523877 OXSR1O95747 527 aaPredicted RBP6.84□□□□□ -1.31
SDC2-208ENST00000523877 OPN1LWP04000 364 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 TUBB4AP04350 444 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 IL6P05231 212 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 CCDC192P0DO97 292 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 CASTP20810 708 aaKnown RBP6.84□□□□□ -1.31
SDC2-208ENST00000523877 SYT1P21579 422 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 KCNA5P22460 613 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 TRHRP34981 398 aaPredicted RBP6.84□□□□□ -1.31
SDC2-208ENST00000523877 GARSP41250 739 aaKnown RBP6.84□□□□□ -1.31
SDC2-208ENST00000523877 STARP49675 285 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 SLC12A3P55017 1021 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 STX17P56962 302 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 ASIC1P78348 528 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 EHHADHQ08426 723 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 CALCOCO2Q13137 446 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 RASGRF1Q13972 1273 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 GALEQ14376 348 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 ZMYND11Q15326 602 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 ZCWPW2Q504Y3 356 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 IFIT1BQ5T764 474 aaKnown RBP6.84□□□□□ -1.31
SDC2-208ENST00000523877 C6orf163Q5TEZ5 329 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 RASIP1Q5U651 963 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 TCERG1LQ5VWI1 586 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 CASC4Q6P4E1 433 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 KLHL24Q6TFL4 600 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 TXNRD3Q86VQ6 643 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 LRRC6Q86X45 466 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 RFX6Q8HWS3 928 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 CDKL3Q8IVW4 592 aaPredicted RBP6.84□□□□□ -1.31
SDC2-208ENST00000523877 ALDH16A1Q8IZ83 802 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 SYCE1Q8N0S2 351 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 RNF169Q8NCN4 708 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 SLC24A4Q8NFF2 622 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 FBXO27Q8NI29 283 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 ETNPPLQ8TBG4 499 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 PHOSPHO2Q8TCD6 241 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 RAB7BQ96AH8 199 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 SGCZQ96LD1 299 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 DACH2Q96NX9 599 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 OLFM3Q96PB7 478 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 FAM193BQ96PV7 902 aaPredicted RBP6.84□□□□□ -1.31
SDC2-208ENST00000523877 FAM111AQ96PZ2 611 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 USP28Q96RU2 1077 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 CSRNP1Q96S65 589 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 CDK5RAP1Q96SZ6 601 aaKnown RBP6.84□□□□□ -1.31
SDC2-208ENST00000523877 TBCBQ99426 244 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 PLIN2Q99541 437 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 SLC29A1Q99808 456 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 ESYT1Q9BSJ8 1104 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 CDK19Q9BWU1 502 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 BTBD2Q9BX70 525 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 CALN1Q9BXU9 219 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 ZNF341Q9BYN7 854 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 VCXQ9H320 206 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 ACTR5Q9H9F9 607 aaPredicted RBP6.84□□□□□ -1.31
SDC2-208ENST00000523877 RC3H2Q9HBD1 1191 aaKnown RBP6.84□□□□□ -1.31
SDC2-208ENST00000523877 VPS45Q9NRW7 570 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 AGPAT3Q9NRZ7 376 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 AKAP7Q9P0M2 348 aaPredicted RBP6.84□□□□□ -1.31
SDC2-208ENST00000523877 PRKAG3Q9UGI9 489 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 VPS28Q9UK41 221 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 RNF112Q9ULX5 631 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 DNAJC16Q9Y2G8 782 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 RWDD3Q9Y3V2 267 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 NOX1Q9Y5S8 564 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 USP16Q9Y5T5 823 aa6.84□□□□□ -1.31
SDC2-208ENST00000523877 EPRSP07814 1512 aaKnown RBP6.84□□□□□ -1.31
SDC2-208ENST00000523877 MIF4GDA9UHW6 222 aaKnown RBP6.83□□□□□ -1.32
SDC2-208ENST00000523877 CENPBD1B2RD01 187 aa6.83□□□□□ -1.32
SDC2-208ENST00000523877 K7ERQ8 282 aa6.83□□□□□ -1.32
SDC2-208ENST00000523877 IFIT3O14879 490 aaKnown RBP6.83□□□□□ -1.32
SDC2-208ENST00000523877 CASC3O15234 703 aaKnown RBP6.83□□□□□ -1.32
SDC2-208ENST00000523877 GPC4O75487 556 aa6.83□□□□□ -1.32
SDC2-208ENST00000523877 PSAPP07602 524 aa6.83□□□□□ -1.32
SDC2-208ENST00000523877 PFKMP08237 780 aa6.83□□□□□ -1.32
SDC2-208ENST00000523877 RARGP13631 454 aa6.83□□□□□ -1.32
SDC2-208ENST00000523877 ATP1A3P13637 1013 aa6.83□□□□□ -1.32
SDC2-208ENST00000523877 NMT1P30419 496 aaKnown RBP6.83□□□□□ -1.32
SDC2-208ENST00000523877 HLA-FP30511 346 aa6.83□□□□□ -1.32
SDC2-208ENST00000523877 GGCXP38435 758 aa6.83□□□□□ -1.32
SDC2-208ENST00000523877 SLC1A1P43005 524 aa6.83□□□□□ -1.32
SDC2-208ENST00000523877 PSMC5P62195 406 aa6.83□□□□□ -1.32
SDC2-208ENST00000523877 YWHAZP63104 245 aaKnown RBP6.83□□□□□ -1.32
SDC2-208ENST00000523877 DSC2Q02487 901 aa6.83□□□□□ -1.32
SDC2-208ENST00000523877 PRKCZQ05513 592 aa6.83□□□□□ -1.32
SDC2-208ENST00000523877 PPARAQ07869 468 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms