RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 RALGDSQ12967 914 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 LRP8Q14114 963 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 CLUL1Q15846 466 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 PLEKHA7Q6IQ23 1121 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 PPP1R18Q6NYC8 613 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 MYO1HQ8N1T3 1032 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 CLIP4Q8N3C7 705 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 CCDC33Q8N5R6 958 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 PSPC1Q8WXF1 523 aaKnown RBP7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 ATP6V0A1Q93050 837 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 SKA1Q96BD8 255 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 THAP11Q96EK4 314 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 REEP2Q9BRK0 252 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 CRNKL1Q9BZJ0 848 aaKnown RBP7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 EHD1Q9H4M9 534 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 SLC38A7Q9NVC3 462 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 HERC5Q9UII4 1024 aaKnown RBP7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 DNPEPQ9ULA0 475 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 TCRBV7S3A2A0A539 114 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 USP17L5A8MUK1 530 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 E9PBE3 544 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 RGL2O15211 777 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 UGT1A9O60656 530 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 TOM1L1O75674 476 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 DDHD2O94830 711 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 UQCRFS1P1P0C7P4 283 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 CALM1P0DP23 149 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 CALM2P0DP24 149 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 CALM3P0DP25 149 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 TKTP29401 623 aaKnown RBP7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 HSPA1LP34931 641 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 GRM5P41594 1212 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 CTSWP56202 376 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 FAAP100Q0VG06 881 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 BST1Q10588 318 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 DNASE1L3Q13609 305 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 CHI3L2Q15782 390 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 FGD3Q5JSP0 725 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 ANKRD22Q5VYY1 191 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 Q6ZNX1 250 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 SPNS2Q8IVW8 549 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 BBS5Q8N3I7 341 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 CAPSLQ8WWF8 208 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 PGBD4Q96DM1 585 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 TMEM47Q9BQJ4 181 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 GPR88Q9GZN0 384 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 ANKRD2Q9GZV1 360 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 MIR1-1HGQ9H1L0 117 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 UGT1A7Q9HAW7 530 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 UGT1A10Q9HAW8 530 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 UGT1A8Q9HAW9 530 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 TBC1D30Q9Y2I9 924 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 FAM32AQ9Y421 112 aaKnown RBP7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 PCDHGA8Q9Y5G5 932 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 ITSN1Q15811 1721 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 GOLGA8QA0A0J9YX86 632 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 KANSL1LA0AUZ9 987 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 GOLGA8OA6NCC3 632 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 GOLGA8NF8WBI6 632 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 WDR46O15213 610 aaKnown RBP7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 MT-ND3P03897 115 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 FAM86B2P0C5J1 330 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 ALAS1P13196 640 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 PTPN1P18031 435 aaKnown RBP7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 UGT1A6P19224 532 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 LMNB1P20700 586 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 UGT1A1P22309 533 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 UGT1A4P22310 534 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 UGT1A3P35503 534 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 UGT1A5P35504 534 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 NR4A2P43354 598 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 YAP1P46937 504 aaKnown RBP7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 JAM2P57087 298 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 GPX6P59796 221 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 PFKPQ01813 784 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 MAPK11Q15759 364 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 ZNF568Q3ZCX4 644 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 IL31Q6EBC2 164 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 NOP9Q86U38 636 aaKnown RBP7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 RHPN2Q8IUC4 686 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 NUP93Q8N1F7 819 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 LRRC47Q8N1G4 583 aaKnown RBP7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 SNX31Q8N9S9 440 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 PDCD6IPQ8WUM4 868 aaKnown RBP7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 HAS1Q92839 578 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 MARK4Q96L34 752 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 RIOK1Q9BRS2 568 aaKnown RBP7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 INTS2Q9H0H0 1204 aaKnown RBP7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 GPRC5DQ9NZD1 345 aa7.58□□□□□ -1.2
LIMCH1-207ENST00000508466 ARHGAP23Q9P227 1491 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 DISP2A7MBM2 1401 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 TOR1BO14657 336 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 MAGEB2O15479 319 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 ITM2AO43736 263 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 KDM1AO60341 852 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 ENTPD3O75355 529 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 ZBED1O96006 694 aa7.57□□□□□ -1.2
LIMCH1-207ENST00000508466 MUTP22033 750 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms