RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 NIF3L1Q9GZT8 377 aa25.58■■□□□ 1.69
CPNE1-223ENST00000475146 APOBEC3GQ9HC16 384 aaKnown RBP25.58■■□□□ 1.69
CPNE1-223ENST00000475146 ARMCX3Q9UH62 379 aaPredicted RBP25.58■■□□□ 1.69
CPNE1-223ENST00000475146 ATP8B3O60423 1300 aa25.58■■□□□ 1.69
CPNE1-223ENST00000475146 PPP1R3GB7ZBB8 358 aa25.57■■□□□ 1.68
CPNE1-223ENST00000475146 F8VP50 259 aa25.57■■□□□ 1.68
CPNE1-223ENST00000475146 AOC1P19801 751 aa25.57■■□□□ 1.68
CPNE1-223ENST00000475146 NDST1P52848 882 aa25.57■■□□□ 1.68
CPNE1-223ENST00000475146 ORC1Q13415 861 aa25.57■■□□□ 1.68
CPNE1-223ENST00000475146 SLC44A4Q53GD3 710 aa25.57■■□□□ 1.68
CPNE1-223ENST00000475146 ACOT1Q86TX2 421 aa25.57■■□□□ 1.68
CPNE1-223ENST00000475146 SPATA17Q96L03 361 aa25.57■■□□□ 1.68
CPNE1-223ENST00000475146 MYRFLQ96LU7 910 aa25.57■■□□□ 1.68
CPNE1-223ENST00000475146 PRRX2Q99811 253 aa25.57■■□□□ 1.68
CPNE1-223ENST00000475146 SLC46A2Q9BY10 475 aa25.57■■□□□ 1.68
CPNE1-223ENST00000475146 HMGXB4Q9UGU5 601 aa25.57■■□□□ 1.68
CPNE1-223ENST00000475146 ZMYM5Q9UJ78 669 aa25.57■■□□□ 1.68
CPNE1-223ENST00000475146 PTPRDP23468 1912 aa25.57■■□□□ 1.68
CPNE1-223ENST00000475146 BICDL2A1A5D9 508 aa25.56■■□□□ 1.68
CPNE1-223ENST00000475146 ZNF263O14978 683 aa25.56■■□□□ 1.68
CPNE1-223ENST00000475146 PRAMEF12O95522 483 aa25.56■■□□□ 1.68
CPNE1-223ENST00000475146 DDX6P26196 483 aaKnown RBP eCLIP25.56■■□□□ 1.689e-13■■□□□ 13.7
CPNE1-223ENST00000475146 MCCD1P59942 119 aaPredicted RBP25.56■■□□□ 1.68
CPNE1-223ENST00000475146 TTI2Q6NXR4 508 aa25.56■■□□□ 1.68
CPNE1-223ENST00000475146 MFSD6LQ8IWD5 586 aa25.56■■□□□ 1.68
CPNE1-223ENST00000475146 MAB21L3Q8N8X9 362 aa25.56■■□□□ 1.68
CPNE1-223ENST00000475146 FBXL13Q8NEE6 735 aa25.56■■□□□ 1.68
CPNE1-223ENST00000475146 SEMA4DQ92854 862 aa25.56■■□□□ 1.68
CPNE1-223ENST00000475146 DNASE1L2Q92874 299 aa25.56■■□□□ 1.68
CPNE1-223ENST00000475146 IRF7Q92985 503 aa25.56■■□□□ 1.68
CPNE1-223ENST00000475146 CEP295NLQ96MC4 621 aa25.56■■□□□ 1.68
CPNE1-223ENST00000475146 CEP63Q96MT8 703 aa25.56■■□□□ 1.68
CPNE1-223ENST00000475146 BCO2Q9BYV7 579 aa25.56■■□□□ 1.68
CPNE1-223ENST00000475146 SMG9Q9H0W8 520 aaKnown RBP25.56■■□□□ 1.68
CPNE1-223ENST00000475146 PI15O43692 258 aa25.55■■□□□ 1.68
CPNE1-223ENST00000475146 LRRN2O75325 713 aa25.55■■□□□ 1.68
CPNE1-223ENST00000475146 TADA3O75528 432 aa25.55■■□□□ 1.68
CPNE1-223ENST00000475146 TRIM21P19474 475 aaKnown RBP25.55■■□□□ 1.68
CPNE1-223ENST00000475146 AVPR1AP37288 418 aa25.55■■□□□ 1.68
CPNE1-223ENST00000475146 CACNA2D1P54289 1103 aa25.55■■□□□ 1.68
CPNE1-223ENST00000475146 STX17P56962 302 aa25.55■■□□□ 1.68
CPNE1-223ENST00000475146 PRKCQQ04759 706 aa25.55■■□□□ 1.68
CPNE1-223ENST00000475146 PAK1Q13153 545 aa25.55■■□□□ 1.68
CPNE1-223ENST00000475146 CCDC40Q4G0X9 1142 aa25.55■■□□□ 1.68
CPNE1-223ENST00000475146 TXNDC8Q6A555 127 aa25.55■■□□□ 1.68
CPNE1-223ENST00000475146 PHLDB3Q6NSJ2 640 aa25.55■■□□□ 1.68
CPNE1-223ENST00000475146 DENND5BQ6ZUT9 1274 aa25.55■■□□□ 1.68
CPNE1-223ENST00000475146 FAM35AQ86V20 835 aa25.55■■□□□ 1.68
CPNE1-223ENST00000475146 UNC93AQ86WB7 457 aa25.55■■□□□ 1.68
CPNE1-223ENST00000475146 CMTM8Q8IZV2 173 aa25.55■■□□□ 1.68
CPNE1-223ENST00000475146 TRIML1Q8N9V2 468 aa25.55■■□□□ 1.68
CPNE1-223ENST00000475146 PRSS33Q8NF86 280 aa25.55■■□□□ 1.68
CPNE1-223ENST00000475146 C8orf48Q96LL4 319 aa25.55■■□□□ 1.68
CPNE1-223ENST00000475146 DUSP9Q99956 384 aaKnown RBP25.55■■□□□ 1.68
CPNE1-223ENST00000475146 CYP3A43Q9HB55 503 aa25.55■■□□□ 1.68
CPNE1-223ENST00000475146 METTL14Q9HCE5 456 aaKnown RBP25.55■■□□□ 1.68
CPNE1-223ENST00000475146 TRPC7Q9HCX4 862 aa25.55■■□□□ 1.68
CPNE1-223ENST00000475146 RAB20Q9NX57 234 aa25.55■■□□□ 1.68
CPNE1-223ENST00000475146 KIAA1468Q9P260 1216 aa25.55■■□□□ 1.68
CPNE1-223ENST00000475146 NUP210Q8TEM1 1887 aaPredicted RBP25.55■■□□□ 1.68
CPNE1-223ENST00000475146 CD58P19256 250 aa25.54■■□□□ 1.68
CPNE1-223ENST00000475146 STARD6P59095 220 aa25.54■■□□□ 1.68
CPNE1-223ENST00000475146 CBWD6Q4V339 395 aa25.54■■□□□ 1.68
CPNE1-223ENST00000475146 WDR44Q5JSH3 913 aa25.54■■□□□ 1.68
CPNE1-223ENST00000475146 CBWD3Q5JTY5 395 aa25.54■■□□□ 1.68
CPNE1-223ENST00000475146 CBWD5Q5RIA9 395 aa25.54■■□□□ 1.68
CPNE1-223ENST00000475146 TPRG1Q6ZUI0 275 aa25.54■■□□□ 1.68
CPNE1-223ENST00000475146 FAM122AQ96E09 287 aa25.54■■□□□ 1.68
CPNE1-223ENST00000475146 FOXQ1Q9C009 403 aa25.54■■□□□ 1.68
CPNE1-223ENST00000475146 HEBP1Q9NRV9 189 aa25.54■■□□□ 1.68
CPNE1-223ENST00000475146 EHD2Q9NZN4 543 aa25.54■■□□□ 1.68
CPNE1-223ENST00000475146 CCDC130P13994 396 aa25.53■■□□□ 1.68
CPNE1-223ENST00000475146 WEE1P30291 646 aa25.53■■□□□ 1.68
CPNE1-223ENST00000475146 INCA1Q0VD86 236 aa25.53■■□□□ 1.68
CPNE1-223ENST00000475146 FILIP1Q7Z7B0 1213 aa25.53■■□□□ 1.68
CPNE1-223ENST00000475146 MON1AQ86VX9 555 aa25.53■■□□□ 1.68
CPNE1-223ENST00000475146 SMARCD1Q96GM5 515 aa25.53■■□□□ 1.68
CPNE1-223ENST00000475146 KRT82Q9NSB4 513 aa25.53■■□□□ 1.68
CPNE1-223ENST00000475146 FAM49BQ9NUQ9 324 aa25.53■■□□□ 1.68
CPNE1-223ENST00000475146 TMEM30AQ9NV96 361 aa25.53■■□□□ 1.68
CPNE1-223ENST00000475146 OBP2AQ9NY56 170 aa25.53■■□□□ 1.68
CPNE1-223ENST00000475146 OBSL1O75147 1896 aa25.53■■□□□ 1.68
CPNE1-223ENST00000475146 COL4A3Q01955 1670 aa25.52■■□□□ 1.68
CPNE1-223ENST00000475146 NUBP1P53384 320 aa25.52■■□□□ 1.68
CPNE1-223ENST00000475146 USP46P62068 366 aa25.52■■□□□ 1.68
CPNE1-223ENST00000475146 IFRD2Q12894 506 aaPredicted RBP25.52■■□□□ 1.68
CPNE1-223ENST00000475146 FRMD5Q7Z6J6 570 aa25.52■■□□□ 1.68
CPNE1-223ENST00000475146 CRYBG2Q8N1P7 616 aa25.52■■□□□ 1.68
CPNE1-223ENST00000475146 CELF5Q8N6W0 485 aaKnown RBP25.52■■□□□ 1.68
CPNE1-223ENST00000475146 BPIFB1Q8TDL5 484 aa25.52■■□□□ 1.68
CPNE1-223ENST00000475146 SLC35C1Q96A29 364 aa25.52■■□□□ 1.68
CPNE1-223ENST00000475146 NT5C1AQ9BXI3 368 aa25.52■■□□□ 1.68
CPNE1-223ENST00000475146 DMAP1Q9NPF5 467 aaPredicted RBP25.52■■□□□ 1.68
CPNE1-223ENST00000475146 SIT1Q9Y3P8 196 aa25.52■■□□□ 1.68
CPNE1-223ENST00000475146 DENND4CQ5VZ89 1909 aa25.51■■□□□ 1.67
CPNE1-223ENST00000475146 KANSL1LA0AUZ9 987 aa25.51■■□□□ 1.67
CPNE1-223ENST00000475146 CHADO15335 359 aa25.51■■□□□ 1.67
CPNE1-223ENST00000475146 GALR2O43603 387 aaPredicted RBP25.51■■□□□ 1.67
CPNE1-223ENST00000475146 AP1G2O75843 785 aa25.51■■□□□ 1.67
CPNE1-223ENST00000475146 PLA2G5P39877 138 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms