RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 XPO6Q96QU8 1125 aaKnown RBP14.38□□□□□ -0.11
BRAT1-203ENST00000467558 MTIF3Q9H2K0 278 aaKnown RBP14.38□□□□□ -0.11
BRAT1-203ENST00000467558 TNFSF13BQ9Y275 285 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 SPECC1L-ADORA2AF8WAN1 911 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 PRRG1O14668 218 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 GLI1P08151 1106 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 PBX1P40424 430 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 BFSP2Q13515 415 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 SMAD1Q15797 465 aaKnown RBP14.38□□□□□ -0.11
BRAT1-203ENST00000467558 C12orf56Q8IXR9 622 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 USP33Q8TEY7 942 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 PRMT1Q99873 361 aaKnown RBP14.38□□□□□ -0.11
BRAT1-203ENST00000467558 PSD3Q9NYI0 1048 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 LMCD1Q9NZU5 365 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 NRCAMQ92823 1304 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 SLC15A5A6NIM6 579 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 SPDYE5A6NIY4 337 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 SNRPAP09012 282 aaKnown RBP14.38□□□□□ -0.11
BRAT1-203ENST00000467558 RAB27AP51159 221 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 ZNF280AP59817 542 aaPredicted RBP14.38□□□□□ -0.11
BRAT1-203ENST00000467558 FSCN1Q16658 493 aaKnown RBP14.38□□□□□ -0.11
BRAT1-203ENST00000467558 ZNF662Q6ZS27 426 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 MOB2Q70IA6 237 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 C4orf33Q8N1A6 199 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 EFHD1Q9BUP0 239 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 TMEM106CQ9BVX2 250 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 ADAM33Q9BZ11 813 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 PIDD1Q9HB75 910 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 RAB21Q9UL25 225 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 PCDHA3Q9Y5H8 950 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 HOXA2O43364 376 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 SNX2O60749 519 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 LSP1P33241 339 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 MAGEA9P43362 315 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 ALDH7A1P49419 539 aaKnown RBP14.38□□□□□ -0.11
BRAT1-203ENST00000467558 CAPSQ13938 189 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 UGCGQ16739 394 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 TRIM68Q6AZZ1 485 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 TRIM33Q9UPN9 1127 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 RIPK3Q9Y572 518 aa14.38□□□□□ -0.11
BRAT1-203ENST00000467558 ATRNL1Q5VV63 1379 aa14.37□□□□□ -0.11
BRAT1-203ENST00000467558 CLGNO14967 610 aa14.37□□□□□ -0.11
BRAT1-203ENST00000467558 CYBBP04839 570 aa14.37□□□□□ -0.11
BRAT1-203ENST00000467558 IRAK1P51617 712 aa14.37□□□□□ -0.11
BRAT1-203ENST00000467558 PTK7Q13308 1070 aa14.37□□□□□ -0.11
BRAT1-203ENST00000467558 LAMB3Q13751 1172 aa14.37□□□□□ -0.11
BRAT1-203ENST00000467558 FRA10AC1Q70Z53 315 aa14.37□□□□□ -0.11
BRAT1-203ENST00000467558 SLFN11Q7Z7L1 901 aa14.37□□□□□ -0.11
BRAT1-203ENST00000467558 SHC3Q92529 594 aa14.37□□□□□ -0.11
BRAT1-203ENST00000467558 GTSE1Q9NYZ3 720 aa14.37□□□□□ -0.11
BRAT1-203ENST00000467558 FARP1Q9Y4F1 1045 aaPredicted RBP14.37□□□□□ -0.11
BRAT1-203ENST00000467558 ZC3H4Q9UPT8 1303 aaKnown RBP14.37□□□□□ -0.11
BRAT1-203ENST00000467558 TMEM120BA0PK00 339 aa14.37□□□□□ -0.11
BRAT1-203ENST00000467558 E5RI56 91 aa14.37□□□□□ -0.11
BRAT1-203ENST00000467558 FDFT1P37268 417 aa14.37□□□□□ -0.11
BRAT1-203ENST00000467558 NAPEPLDQ6IQ20 393 aa14.37□□□□□ -0.11
BRAT1-203ENST00000467558 KDELC2Q7Z4H8 507 aa14.37□□□□□ -0.11
BRAT1-203ENST00000467558 SPATA21Q7Z572 469 aa14.37□□□□□ -0.11
BRAT1-203ENST00000467558 CREG2Q8IUH2 290 aa14.37□□□□□ -0.11
BRAT1-203ENST00000467558 FAM71AQ8IYT1 594 aa14.37□□□□□ -0.11
BRAT1-203ENST00000467558 ATXN7L3BQ96GX2 97 aa14.37□□□□□ -0.11
BRAT1-203ENST00000467558 CACYBPQ9HB71 228 aaKnown RBP14.37□□□□□ -0.11
BRAT1-203ENST00000467558 MROH7Q68CQ1 1323 aa14.37□□□□□ -0.11
BRAT1-203ENST00000467558 CCDC195A0A1B0GUA6 201 aa14.37□□□□□ -0.11
BRAT1-203ENST00000467558 HMGCRP04035 888 aa14.37□□□□□ -0.11
BRAT1-203ENST00000467558 KITP10721 976 aa14.37□□□□□ -0.11
BRAT1-203ENST00000467558 HSPA8P11142 646 aaKnown RBP14.37□□□□□ -0.11
BRAT1-203ENST00000467558 AKAP5P24588 427 aa14.37□□□□□ -0.11
BRAT1-203ENST00000467558 CDH8P55286 799 aa14.37□□□□□ -0.11
BRAT1-203ENST00000467558 MTM1Q13496 603 aa14.37□□□□□ -0.11
BRAT1-203ENST00000467558 SLC12A1Q13621 1099 aa14.37□□□□□ -0.11
BRAT1-203ENST00000467558 NFE2Q16621 373 aaPredicted RBP14.37□□□□□ -0.11
BRAT1-203ENST00000467558 FASTKD1Q53R41 847 aaKnown RBP14.37□□□□□ -0.11
BRAT1-203ENST00000467558 TREML2Q5T2D2 321 aa14.37□□□□□ -0.11
BRAT1-203ENST00000467558 CHSY1Q86X52 802 aa14.37□□□□□ -0.11
BRAT1-203ENST00000467558 NKX2-3Q8TAU0 364 aa14.37□□□□□ -0.11
BRAT1-203ENST00000467558 ACTL9Q8TC94 416 aa14.37□□□□□ -0.11
BRAT1-203ENST00000467558 TBCBQ99426 244 aa14.37□□□□□ -0.11
BRAT1-203ENST00000467558 STARD7Q9NQZ5 370 aa14.37□□□□□ -0.11
BRAT1-203ENST00000467558 ARL2BPQ9Y2Y0 163 aa14.37□□□□□ -0.11
BRAT1-203ENST00000467558 KDM3BQ7LBC6 1761 aa14.36□□□□□ -0.11
BRAT1-203ENST00000467558 UBA6A0AVT1 1052 aaPredicted RBP14.36□□□□□ -0.11
BRAT1-203ENST00000467558 SPRP35270 261 aaPredicted RBP14.36□□□□□ -0.11
BRAT1-203ENST00000467558 PLA2G4AP47712 749 aa14.36□□□□□ -0.11
BRAT1-203ENST00000467558 ZACNQ401N2 412 aa14.36□□□□□ -0.11
BRAT1-203ENST00000467558 ACCSLQ4AC99 568 aa14.36□□□□□ -0.11
BRAT1-203ENST00000467558 ABHD15Q6UXT9 468 aa14.36□□□□□ -0.11
BRAT1-203ENST00000467558 ZDHHC17Q8IUH5 632 aa14.36□□□□□ -0.11
BRAT1-203ENST00000467558 CAVIN3Q969G5 261 aa14.36□□□□□ -0.11
BRAT1-203ENST00000467558 ELMO3Q96BJ8 720 aa14.36□□□□□ -0.11
BRAT1-203ENST00000467558 CASQ2O14958 399 aaPredicted RBP14.36□□□□□ -0.11
BRAT1-203ENST00000467558 CFLARO15519 480 aa14.36□□□□□ -0.11
BRAT1-203ENST00000467558 PAN2Q504Q3 1202 aaKnown RBP14.36□□□□□ -0.11
BRAT1-203ENST00000467558 C10orf120Q5SQS8 335 aa14.36□□□□□ -0.11
BRAT1-203ENST00000467558 FAM117BQ6P1L5 589 aa14.36□□□□□ -0.11
BRAT1-203ENST00000467558 FAM131BQ86XD5 332 aa14.36□□□□□ -0.11
BRAT1-203ENST00000467558 TMEM169Q96HH4 297 aa14.36□□□□□ -0.11
BRAT1-203ENST00000467558 XPNPEP3Q9NQH7 507 aa14.36□□□□□ -0.11
BRAT1-203ENST00000467558 AP4E1Q9UPM8 1137 aa14.36□□□□□ -0.11
BRAT1-203ENST00000467558 IGLV3-22A0A075B6J6 115 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms