RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 GNA15P30679 374 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 KRT9P35527 623 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 STAT1P42224 750 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 PPP3CCP48454 512 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 PDE6CP51160 858 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 BCAT1P54687 386 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 RAD23BP54727 409 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 POLR2FP61218 127 aaKnown RBP6.76□□□□□ -1.33
SF3B1-206ENST00000462613 RBM10P98175 930 aaKnown RBP6.76□□□□□ -1.33
SF3B1-206ENST00000462613 DLX2Q07687 328 aaPredicted RBP6.76□□□□□ -1.33
SF3B1-206ENST00000462613 DRAP1Q14919 205 aaPredicted RBP6.76□□□□□ -1.33
SF3B1-206ENST00000462613 SMAD2Q15796 467 aaKnown RBP6.76□□□□□ -1.33
SF3B1-206ENST00000462613 TSR1Q2NL82 804 aaKnown RBP6.76□□□□□ -1.33
SF3B1-206ENST00000462613 ARHGAP17Q68EM7 881 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 SCARA3Q6AZY7 606 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 OTOP3Q7RTS5 596 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 GRASPQ7Z6J2 395 aaPredicted RBP6.76□□□□□ -1.33
SF3B1-206ENST00000462613 FAM35AQ86V20 835 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 LRRTM3Q86VH5 581 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 ARHGEF19Q8IW93 802 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.76□□□□□ -1.33
SF3B1-206ENST00000462613 NUP93Q8N1F7 819 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 PLCD3Q8N3E9 789 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 C12orf76Q8N812 135 aaPredicted RBP6.76□□□□□ -1.33
SF3B1-206ENST00000462613 SLC4A11Q8NBS3 891 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 MSANTD4Q8NCY6 345 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 STKLD1Q8NE28 680 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 PDZD8Q8NEN9 1154 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 SLC2A14Q8TDB8 520 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 SHC3Q92529 594 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 MRPS31Q92665 395 aaKnown RBP6.76□□□□□ -1.33
SF3B1-206ENST00000462613 PSMG2Q969U7 264 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 ELMO3Q96BJ8 720 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 SPATA17Q96L03 361 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 C8orf48Q96LL4 319 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 STK33Q9BYT3 514 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 TRIM5Q9C035 493 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 GPR88Q9GZN0 384 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 NUCKS1Q9H1E3 243 aaKnown RBP6.76□□□□□ -1.33
SF3B1-206ENST00000462613 SLITRK6Q9H5Y7 841 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 WDR6Q9NNW5 1121 aaKnown RBP6.76□□□□□ -1.33
SF3B1-206ENST00000462613 PNPLA8Q9NP80 782 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 RTN4Q9NQC3 1192 aaKnown RBP6.76□□□□□ -1.33
SF3B1-206ENST00000462613 TMLHEQ9NVH6 421 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 COMMD8Q9NX08 183 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.76□□□□□ -1.33
SF3B1-206ENST00000462613 IFNKQ9P0W0 207 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 CEP72Q9P209 647 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 PRKAG3Q9UGI9 489 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 MAGED2Q9UNF1 606 aaPredicted RBP6.76□□□□□ -1.33
SF3B1-206ENST00000462613 USTQ9Y2C2 406 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 MRPS23Q9Y3D9 190 aaKnown RBP6.76□□□□□ -1.33
SF3B1-206ENST00000462613 USP15Q9Y4E8 981 aaPredicted RBP6.76□□□□□ -1.33
SF3B1-206ENST00000462613 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.76□□□□□ -1.335e-9■□□□□ 10.2
SF3B1-206ENST00000462613 CLUHO75153 1309 aa6.76□□□□□ -1.33
SF3B1-206ENST00000462613 GRXCR2A6NFK2 248 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 GOLGA6L6A8MZA4 724 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 F8VP50 259 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 M0QYV0 167 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 HCRTO43612 131 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 RHOP08100 348 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 NPR3P17342 541 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 DDX6P26196 483 aaKnown RBP eCLIP6.75□□□□□ -1.33
SF3B1-206ENST00000462613 GABRR2P28476 465 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 GBP2P32456 591 aaPredicted RBP6.75□□□□□ -1.33
SF3B1-206ENST00000462613 MAP3K7CLP57077 242 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 TFF2Q03403 129 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 BST2Q10589 180 aaKnown RBP6.75□□□□□ -1.33
SF3B1-206ENST00000462613 KCNMA1Q12791 1236 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 IFRD2Q12894 506 aaPredicted RBP6.75□□□□□ -1.33
SF3B1-206ENST00000462613 ORC1Q13415 861 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 TRIM14Q14142 442 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 GOLGA7BQ2TAP0 167 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 TJAP1Q5JTD0 557 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 PPP1R26Q5T8A7 1209 aaPredicted RBP6.75□□□□□ -1.33
SF3B1-206ENST00000462613 MTSS1LQ765P7 747 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 GET4Q7L5D6 327 aaPredicted RBP6.75□□□□□ -1.33
SF3B1-206ENST00000462613 DNAJB7Q7Z6W7 309 aaPredicted RBP6.75□□□□□ -1.33
SF3B1-206ENST00000462613 TADA2BQ86TJ2 420 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 FUKQ8N0W3 1084 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 SIX6OS1Q8N1H7 587 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 C12orf29Q8N999 325 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 TDRD5Q8NAT2 981 aaKnown RBP6.75□□□□□ -1.33
SF3B1-206ENST00000462613 ANKRD52Q8NB46 1076 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 IPO4Q8TEX9 1081 aaKnown RBP6.75□□□□□ -1.33
SF3B1-206ENST00000462613 WHAMMQ8TF30 809 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 GIPC2Q8TF65 315 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 GOLGA1Q92805 767 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 TRMT2BQ96GJ1 504 aaKnown RBP6.75□□□□□ -1.33
SF3B1-206ENST00000462613 KREMEN1Q96MU8 473 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 ASB2Q96Q27 587 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 TWNKQ96RR1 684 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 PKMYT1Q99640 499 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 PHF7Q9BWX1 381 aaPredicted RBP6.75□□□□□ -1.33
SF3B1-206ENST00000462613 DUSP16Q9BY84 665 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 B3GNT5Q9BYG0 378 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 EDEM3Q9BZQ6 932 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 ZNF518BQ9C0D4 1074 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 MIS12Q9H081 205 aa6.75□□□□□ -1.33
SF3B1-206ENST00000462613 S1PR5Q9H228 398 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms