RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 STX8Q9UNK0 236 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 PCDHA5Q9Y5H7 936 aa8.24□□□□□ -1.09
BRCC3-208ENST00000453705 A0A1W2PQH9 124 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 DDTLA6NHG4 134 aaPredicted RBP8.23□□□□□ -1.09
BRCC3-208ENST00000453705 WNT7AO00755 349 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 ZSCAN9O15535 394 aaPredicted RBP8.23□□□□□ -1.09
BRCC3-208ENST00000453705 ADCY7P51828 1080 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 CYP4F8P98187 520 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 GRIN1Q05586 938 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 CUL4BQ13620 913 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 BLMHQ13867 455 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 TMEM266Q2M3C6 531 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 CERKLQ49MI3 558 aaPredicted RBP8.23□□□□□ -1.09
BRCC3-208ENST00000453705 FNDC3BQ53EP0 1204 aaKnown RBP8.23□□□□□ -1.09
BRCC3-208ENST00000453705 DCAF17Q5H9S7 520 aaPredicted RBP8.23□□□□□ -1.09
BRCC3-208ENST00000453705 SH2D4BQ5SQS7 431 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 OLFML2BQ68BL8 750 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 PIK3AP1Q6ZUJ8 805 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 CYP2U1Q7Z449 544 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 CACNA2D3Q8IZS8 1091 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 REXO1Q8N1G1 1221 aaKnown RBP8.23□□□□□ -1.09
BRCC3-208ENST00000453705 ZSCAN1Q8NBB4 408 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 CHTF18Q8WVB6 975 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 SMARCE1Q969G3 411 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 PAGE5Q96GU1 130 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 SCLYQ96I15 445 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 PRICKLE1Q96MT3 831 aaPredicted RBP8.23□□□□□ -1.09
BRCC3-208ENST00000453705 PACSIN1Q9BY11 444 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 B3GNT5Q9BYG0 378 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 RNF38Q9H0F5 515 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 HSPBP1Q9NZL4 362 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 ZNF70Q9UC06 446 aaPredicted RBP8.23□□□□□ -1.09
BRCC3-208ENST00000453705 SERTAD1Q9UHV2 236 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 PTPRFP10586 1907 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 ENC1O14682 589 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 EDIL3O43854 480 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 OR52Z1P0C646 297 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 ARAFP10398 606 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 MYCLP12524 364 aaPredicted RBP8.23□□□□□ -1.09
BRCC3-208ENST00000453705 S100A5P33763 92 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 TXLNAP40222 546 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 SCTRP47872 440 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 IFNAR2P48551 515 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 NAPAP54920 295 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 LRP8Q14114 963 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 HOOK3Q86VS8 718 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 FAM13CQ8NE31 585 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 DPF2Q92785 391 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 PTP4A1Q93096 173 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 ZNF764Q96H86 408 aaPredicted RBP8.23□□□□□ -1.09
BRCC3-208ENST00000453705 MAELQ96JY0 434 aaKnown RBP8.23□□□□□ -1.09
BRCC3-208ENST00000453705 TMOD2Q9NZR1 351 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 KLK14Q9P0G3 267 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 STK17AQ9UEE5 414 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 NDOR1Q9UHB4 597 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 AGO2Q9UKV8 859 aaKnown RBP8.23□□□□□ -1.09
BRCC3-208ENST00000453705 SPEF1Q9Y4P9 236 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 ASB3Q9Y575 518 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 PCNTO95613 3336 aa8.23□□□□□ -1.09
BRCC3-208ENST00000453705 FRMD3A2A2Y4 597 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 SMCO2A6NFE2 343 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 PSMD14O00487 310 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 ACKR2O00590 384 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 POLR2DO15514 142 aaKnown RBP8.22□□□□□ -1.09
BRCC3-208ENST00000453705 TUBB4AP04350 444 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 HEXBP07686 556 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 CYP3A4P08684 503 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 BPIP17213 487 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 BMP6P22004 513 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 CIITAP33076 1130 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 MAP2K2P36507 400 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 USP8P40818 1118 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 EPS15P42566 896 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 ADAM15Q13444 863 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 PMS2P11Q13670 270 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 USP39Q53GS9 565 aaKnown RBP8.22□□□□□ -1.09
BRCC3-208ENST00000453705 KLHDC7AQ5VTJ3 777 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 CIAPIN1Q6FI81 312 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 DCLRE1AQ6PJP8 1040 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 TXNDC11Q6PKC3 985 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 ZYG11AQ6WRX3 759 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 IKBIPQ70UQ0 350 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 MAMDC2Q7Z304 686 aaPredicted RBP8.22□□□□□ -1.09
BRCC3-208ENST00000453705 ADGRF4Q8IZF3 695 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 CCDC150Q8NCX0 1101 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 BTN2A2Q8WVV5 523 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 METTL21AQ8WXB1 218 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 RUBCNQ92622 972 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 C19orf43Q9BQ61 176 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 OCEL1Q9H607 264 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 WDR81Q562E7 1941 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 RNGTTO60942 597 aaKnown RBP8.22□□□□□ -1.09
BRCC3-208ENST00000453705 SLU7O95391 586 aaKnown RBP8.22□□□□□ -1.09
BRCC3-208ENST00000453705 PSAPP07602 524 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 POTEIP0CG38 1075 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 MTIF2P46199 727 aaKnown RBP8.22□□□□□ -1.09
BRCC3-208ENST00000453705 HAAOP46952 286 aa8.22□□□□□ -1.09
BRCC3-208ENST00000453705 MRPL12P52815 198 aaKnown RBP8.22□□□□□ -1.09
BRCC3-208ENST00000453705 ZRSR1Q15695 479 aaKnown RBP8.22□□□□□ -1.09
BRCC3-208ENST00000453705 KBTBD12Q3ZCT8 623 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 179.5 ms