RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 CPB2Q96IY4 423 aa17.08■□□□□ 0.33
PIKFYVE-206ENST00000443896 C16orf70Q9BSU1 422 aa17.08■□□□□ 0.33
PIKFYVE-206ENST00000443896 NINJ2Q9NZG7 142 aa17.08■□□□□ 0.33
PIKFYVE-206ENST00000443896 TJP2Q9UDY2 1190 aa17.08■□□□□ 0.33
PIKFYVE-206ENST00000443896 DRG1Q9Y295 367 aaKnown RBP17.08■□□□□ 0.33
PIKFYVE-206ENST00000443896 CILPO75339 1184 aa17.08■□□□□ 0.32
PIKFYVE-206ENST00000443896 ARF4P18085 180 aaPredicted RBP17.08■□□□□ 0.32
PIKFYVE-206ENST00000443896 KYNUQ16719 465 aa17.08■□□□□ 0.32
PIKFYVE-206ENST00000443896 KYAT1Q16773 422 aa17.08■□□□□ 0.32
PIKFYVE-206ENST00000443896 SLC10A6Q3KNW5 377 aa17.08■□□□□ 0.32
PIKFYVE-206ENST00000443896 CCDC63Q8NA47 563 aa17.08■□□□□ 0.32
PIKFYVE-206ENST00000443896 SLC10A4Q96EP9 437 aa17.08■□□□□ 0.32
PIKFYVE-206ENST00000443896 PWWP2AQ96N64 755 aa17.08■□□□□ 0.32
PIKFYVE-206ENST00000443896 TWNKQ96RR1 684 aa17.08■□□□□ 0.32
PIKFYVE-206ENST00000443896 PPP1R16BQ96T49 567 aa17.08■□□□□ 0.32
PIKFYVE-206ENST00000443896 FOXP3Q9BZS1 431 aa17.08■□□□□ 0.32
PIKFYVE-206ENST00000443896 KATNBL1Q9H079 304 aa17.08■□□□□ 0.32
PIKFYVE-206ENST00000443896 CYP3A43Q9HB55 503 aa17.08■□□□□ 0.32
PIKFYVE-206ENST00000443896 DNAJC17Q9NVM6 304 aaKnown RBP17.08■□□□□ 0.32
PIKFYVE-206ENST00000443896 C3orf70A6NLC5 250 aaPredicted RBP17.08■□□□□ 0.32
PIKFYVE-206ENST00000443896 PLXNB2O15031 1838 aa17.08■□□□□ 0.32
PIKFYVE-206ENST00000443896 TCEA3O75764 348 aa17.08■□□□□ 0.32
PIKFYVE-206ENST00000443896 VTNP04004 478 aa17.08■□□□□ 0.32
PIKFYVE-206ENST00000443896 PDHA1P08559 390 aa17.08■□□□□ 0.32
PIKFYVE-206ENST00000443896 GNAT1P11488 350 aa17.08■□□□□ 0.32
PIKFYVE-206ENST00000443896 PSMA2P25787 234 aa17.08■□□□□ 0.32
PIKFYVE-206ENST00000443896 SLC8A3P57103 927 aa17.08■□□□□ 0.32
PIKFYVE-206ENST00000443896 SLC25A11Q02978 314 aaKnown RBP17.08■□□□□ 0.32
PIKFYVE-206ENST00000443896 PTPN11Q06124 597 aaPredicted RBP17.08■□□□□ 0.32
PIKFYVE-206ENST00000443896 TAOK1Q7L7X3 1001 aa17.08■□□□□ 0.32
PIKFYVE-206ENST00000443896 PRUNE1Q86TP1 453 aa17.08■□□□□ 0.32
PIKFYVE-206ENST00000443896 ALLCQ8N6M5 410 aa17.08■□□□□ 0.32
PIKFYVE-206ENST00000443896 CPXM1Q96SM3 734 aa17.08■□□□□ 0.32
PIKFYVE-206ENST00000443896 ELOVL4Q9GZR5 314 aa17.08■□□□□ 0.32
PIKFYVE-206ENST00000443896 WDR35Q9P2L0 1181 aa17.08■□□□□ 0.32
PIKFYVE-206ENST00000443896 HMGXB4Q9UGU5 601 aa17.08■□□□□ 0.32
PIKFYVE-206ENST00000443896 ANKRD33BA6NCL7 494 aa17.07■□□□□ 0.32
PIKFYVE-206ENST00000443896 GOLGA8SH3BPF8 625 aa17.07■□□□□ 0.32
PIKFYVE-206ENST00000443896 MGRN1O60291 552 aa17.07■□□□□ 0.32
PIKFYVE-206ENST00000443896 ZNF286BP0CG31 522 aa17.07■□□□□ 0.32
PIKFYVE-206ENST00000443896 PSMC1P62191 440 aaKnown RBP17.07■□□□□ 0.32
PIKFYVE-206ENST00000443896 P3H1Q32P28 736 aa17.07■□□□□ 0.32
PIKFYVE-206ENST00000443896 ARFGAP1Q8N6T3 406 aa17.07■□□□□ 0.32
PIKFYVE-206ENST00000443896 JOSD2Q8TAC2 188 aa17.07■□□□□ 0.32
PIKFYVE-206ENST00000443896 TMEM176AQ96HP8 235 aa17.07■□□□□ 0.32
PIKFYVE-206ENST00000443896 LRRD1A4D1F6 860 aa17.07■□□□□ 0.32
PIKFYVE-206ENST00000443896 ITGBL1O95965 494 aaPredicted RBP17.07■□□□□ 0.32
PIKFYVE-206ENST00000443896 OASLQ15646 514 aaKnown RBP17.07■□□□□ 0.32
PIKFYVE-206ENST00000443896 MTHFD1LQ6UB35 978 aa17.07■□□□□ 0.32
PIKFYVE-206ENST00000443896 ZNF467Q7Z7K2 595 aaPredicted RBP17.07■□□□□ 0.32
PIKFYVE-206ENST00000443896 EXOC3L1Q86VI1 746 aa17.07■□□□□ 0.32
PIKFYVE-206ENST00000443896 XYLT1Q86Y38 959 aa17.07■□□□□ 0.32
PIKFYVE-206ENST00000443896 ZCCHC9Q8N567 271 aaKnown RBP17.07■□□□□ 0.32
PIKFYVE-206ENST00000443896 GLIS1Q8NBF1 620 aa17.07■□□□□ 0.32
PIKFYVE-206ENST00000443896 NKD2Q969F2 451 aaPredicted RBP17.07■□□□□ 0.32
PIKFYVE-206ENST00000443896 ITFG2Q969R8 447 aa17.07■□□□□ 0.32
PIKFYVE-206ENST00000443896 ACSF2Q96CM8 615 aaPredicted RBP17.07■□□□□ 0.32
PIKFYVE-206ENST00000443896 CHMP6Q96FZ7 201 aa17.07■□□□□ 0.32
PIKFYVE-206ENST00000443896 ZNF148Q9UQR1 794 aa17.07■□□□□ 0.32
PIKFYVE-206ENST00000443896 EFR3BQ9Y2G0 817 aa17.07■□□□□ 0.32
PIKFYVE-206ENST00000443896 LRCH4O75427 683 aa17.06■□□□□ 0.32
PIKFYVE-206ENST00000443896 ADCYAP1R1P41586 468 aa17.06■□□□□ 0.32
PIKFYVE-206ENST00000443896 KCNJ2P63252 427 aa17.06■□□□□ 0.32
PIKFYVE-206ENST00000443896 ORC1Q13415 861 aa17.06■□□□□ 0.32
PIKFYVE-206ENST00000443896 ILDR2Q71H61 639 aa17.06■□□□□ 0.32
PIKFYVE-206ENST00000443896 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.06■□□□□ 0.32
PIKFYVE-206ENST00000443896 DNALI1O14645 258 aaPredicted RBP17.06■□□□□ 0.32
PIKFYVE-206ENST00000443896 SMNDC1O75940 238 aaKnown RBP eCLIP17.06■□□□□ 0.32
PIKFYVE-206ENST00000443896 ERBB2P04626 1255 aa17.06■□□□□ 0.32
PIKFYVE-206ENST00000443896 LINGO3P0C6S8 592 aa17.06■□□□□ 0.32
PIKFYVE-206ENST00000443896 DRD4P21917 467 aa17.06■□□□□ 0.32
PIKFYVE-206ENST00000443896 VCPP55072 806 aaKnown RBP17.06■□□□□ 0.32
PIKFYVE-206ENST00000443896 ZNF268Q14587 947 aaPredicted RBP17.06■□□□□ 0.32
PIKFYVE-206ENST00000443896 CEP128Q6ZU80 1094 aa17.06■□□□□ 0.32
PIKFYVE-206ENST00000443896 ZNF317Q96PQ6 595 aaPredicted RBP17.06■□□□□ 0.32
PIKFYVE-206ENST00000443896 CCDC134Q9H6E4 229 aa17.06■□□□□ 0.32
PIKFYVE-206ENST00000443896 SLC45A1Q9Y2W3 748 aa17.06■□□□□ 0.32
PIKFYVE-206ENST00000443896 PDHXO00330 501 aa17.06■□□□□ 0.32
PIKFYVE-206ENST00000443896 MICAL2O94851 1124 aa17.06■□□□□ 0.32
PIKFYVE-206ENST00000443896 P4HA1P13674 534 aa17.06■□□□□ 0.32
PIKFYVE-206ENST00000443896 TMEM132DQ14C87 1099 aa17.06■□□□□ 0.32
PIKFYVE-206ENST00000443896 KIAA0319LQ8IZA0 1049 aa17.06■□□□□ 0.32
PIKFYVE-206ENST00000443896 MAB21L3Q8N8X9 362 aa17.06■□□□□ 0.32
PIKFYVE-206ENST00000443896 LBHD1Q9BQE6 289 aaPredicted RBP17.06■□□□□ 0.32
PIKFYVE-206ENST00000443896 H3BRB1 525 aa17.05■□□□□ 0.32
PIKFYVE-206ENST00000443896 TSPAN1O60635 241 aa17.05■□□□□ 0.32
PIKFYVE-206ENST00000443896 ITGAVP06756 1048 aa17.05■□□□□ 0.32
PIKFYVE-206ENST00000443896 KRT7P08729 469 aa17.05■□□□□ 0.32
PIKFYVE-206ENST00000443896 GABRB2P47870 512 aa17.05■□□□□ 0.32
PIKFYVE-206ENST00000443896 TBC1D25Q3MII6 688 aa17.05■□□□□ 0.32
PIKFYVE-206ENST00000443896 GKAP1Q5VSY0 366 aaPredicted RBP17.05■□□□□ 0.32
PIKFYVE-206ENST00000443896 SLC30A9Q6PML9 568 aa17.05■□□□□ 0.32
PIKFYVE-206ENST00000443896 HPDLQ96IR7 371 aa17.05■□□□□ 0.32
PIKFYVE-206ENST00000443896 TUT1Q9H6E5 874 aaKnown RBP17.05■□□□□ 0.32
PIKFYVE-206ENST00000443896 INTS9Q9NV88 658 aaKnown RBP17.05■□□□□ 0.32
PIKFYVE-206ENST00000443896 C2CD2Q9Y426 696 aa17.05■□□□□ 0.32
PIKFYVE-206ENST00000443896 RPS6KL1Q9Y6S9 549 aa17.05■□□□□ 0.32
PIKFYVE-206ENST00000443896 STRNO43815 780 aa17.05■□□□□ 0.32
PIKFYVE-206ENST00000443896 SNAI1O95863 264 aaPredicted RBP17.05■□□□□ 0.32
PIKFYVE-206ENST00000443896 IL1R2P27930 398 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms