RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 MBD2Q9UBB5 411 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 PTBP2Q9UKA9 531 aaKnown RBP5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 ZNF214Q9UL59 606 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 CLEC4AQ9UMR7 237 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 PCDHGB7Q9Y5F8 929 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 NAIPQ13075 1403 aa5.06□□□□□ -1.6
HMGB3P9-201ENST00000441799 A0A087WUV0 522 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 OR5K4A6NMS3 321 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 VSTM5A8MXK1 200 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 VWA5AO00534 786 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 APAF1O14727 1248 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 CAPN9O14815 690 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 WDR46O15213 610 aaKnown RBP5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 ZW10O43264 779 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 KLF4O43474 513 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 FRS3O43559 492 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 IDH3BO43837 385 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 TSPAN3O60637 253 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 CBFA2T3O75081 653 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 MAFO75444 373 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 RFPL1O75677 317 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 URI1O94763 535 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 ERLIN2O94905 339 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 FBXO21O94952 628 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 OR5F1O95221 314 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 TRIM16O95361 564 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 PNMA6AP0CW24 399 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 ITGA4P13612 1032 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 HSD3B1P14060 373 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 HPGDP15428 266 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 ARF4P18085 180 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 S100A1P23297 94 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 EVI2BP34910 448 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 HADHAP40939 763 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 STAT1P42224 750 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 MAPK9P45984 424 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 MTIF2P46199 727 aaKnown RBP5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 KCNJ6P48051 423 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 IFNAR2P48551 515 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 SCNN1BP51168 640 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 ARFIP1P53367 373 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 AP3M2P53677 418 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 SSTP61278 116 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 CETN1Q12798 172 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 IFIT5Q13325 482 aaKnown RBP5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 SQSTM1Q13501 440 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 RAB33AQ14088 237 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 CFAP157Q5JU67 520 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 EEF1DP3Q658K8 133 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 KLC3Q6P597 504 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 RANBP10Q6VN20 620 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 B3GNT6Q6ZMB0 384 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 TTLL7Q6ZT98 887 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 THNSL2Q86YJ6 484 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 Q8N1X5 172 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 SLC4A11Q8NBS3 891 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 RBBP8NLQ8NC74 664 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 TOR1AIP2Q8NFQ8 470 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 PLBD2Q8NHP8 589 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 BCAS4Q8TDM0 211 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 CHAC2Q8WUX2 184 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 VPS50Q96JG6 964 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 RADILQ96JH8 1075 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 ART5Q96L15 291 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 HS6ST2Q96MM7 605 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 SORCS2Q96PQ0 1159 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 NUDCD1Q96RS6 583 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 HNRNPABQ99729 332 aaKnown RBP5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 GPATCH1Q9BRR8 931 aaKnown RBP5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 SCAND2PQ9GZW5 306 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 KIAA1683Q9H0B3 1180 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 ZWILCHQ9H900 591 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 IARS2Q9NSE4 1012 aaKnown RBP5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 INTS10Q9NVR2 710 aaKnown RBP5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 MCM9Q9NXL9 1143 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 TRPM5Q9NZQ8 1165 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 GULP1Q9UBP9 304 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 CHORDC1Q9UHD1 332 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 LCMT1Q9UIC8 334 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 TTC7AQ9ULT0 858 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 INVSQ9Y283 1065 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 TMEM5Q9Y2B1 443 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 MED16Q9Y2X0 877 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 SIT1Q9Y3P8 196 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 ARHGEF12Q9NZN5 1544 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 SIGLEC1Q9BZZ2 1709 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 DENND4BO75064 1496 aaPredicted RBP5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 CNTLNQ9NXG0 1405 aa5.05□□□□□ -1.6
HMGB3P9-201ENST00000441799 IQGAP2Q13576 1575 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 SAMD9Q5K651 1589 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 GOLGA6L7A0A1B0GV03 622 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 EIF3CLB5ME19 914 aaKnown RBP5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 STX16-NPEPL1H3BU86 382 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 H7C0S8 307 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 L7N2F9 121 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 PSMD9O00233 223 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 TRDMT1O14717 391 aaKnown RBP5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 HDAC3O15379 428 aa5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 POLR2DO15514 142 aaKnown RBP5.04□□□□□ -1.6
HMGB3P9-201ENST00000441799 CTNND1O60716 968 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms