RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 LPIN2Q92539 896 aa4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 PMM1Q92871 262 aa4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 CAVIN3Q969G5 261 aa4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 PGBD1Q96JS3 809 aa4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 SNX22Q96L94 193 aa4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 TBCBQ99426 244 aa4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 PSMD1Q99460 953 aa4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 COLEC11Q9BWP8 271 aa4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 STK31Q9BXU1 1019 aa4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 TPSD1Q9BZJ3 242 aa4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 SYNPO2LQ9H987 977 aa4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 XPNPEP3Q9NQH7 507 aa4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 PADI4Q9UM07 663 aa4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 PHTF1Q9UMS5 762 aa4.46□□□□□ -1.69
TRAPPC13-204ENST00000438419 KPNA5O15131 536 aa4.46□□□□□ -1.7
TRAPPC13-204ENST00000438419 YY2O15391 372 aa4.46□□□□□ -1.7
TRAPPC13-204ENST00000438419 IFIT2P09913 472 aaKnown RBP4.46□□□□□ -1.7
TRAPPC13-204ENST00000438419 TXNP10599 105 aaKnown RBP4.46□□□□□ -1.7
TRAPPC13-204ENST00000438419 CARSP49589 748 aaKnown RBP4.46□□□□□ -1.7
TRAPPC13-204ENST00000438419 NEK3P51956 506 aa4.46□□□□□ -1.7
TRAPPC13-204ENST00000438419 OS9Q13438 667 aaPredicted RBP4.46□□□□□ -1.7
TRAPPC13-204ENST00000438419 E2F2Q14209 437 aa4.46□□□□□ -1.7
TRAPPC13-204ENST00000438419 ARHGAP40Q5TG30 622 aa4.46□□□□□ -1.7
TRAPPC13-204ENST00000438419 VPS53Q5VIR6 699 aa4.46□□□□□ -1.7
TRAPPC13-204ENST00000438419 KIAA0895LQ68EN5 471 aa4.46□□□□□ -1.7
TRAPPC13-204ENST00000438419 OLFML1Q6UWY5 402 aa4.46□□□□□ -1.7
TRAPPC13-204ENST00000438419 TOR1AIP2Q8NFQ8 470 aa4.46□□□□□ -1.7
TRAPPC13-204ENST00000438419 MYCBPAPQ8TBZ2 947 aa4.46□□□□□ -1.7
TRAPPC13-204ENST00000438419 SMCR8Q8TEV9 937 aaPredicted RBP4.46□□□□□ -1.7
TRAPPC13-204ENST00000438419 SLC9A6Q92581 669 aa4.46□□□□□ -1.7
TRAPPC13-204ENST00000438419 TNIP3Q96KP6 325 aa4.46□□□□□ -1.7
TRAPPC13-204ENST00000438419 RPS6KC1Q96S38 1066 aa4.46□□□□□ -1.7
TRAPPC13-204ENST00000438419 ACTRT3Q9BYD9 372 aa4.46□□□□□ -1.7
TRAPPC13-204ENST00000438419 AMBRA1Q9C0C7 1298 aa4.46□□□□□ -1.7
TRAPPC13-204ENST00000438419 DHX36Q9H2U1 1008 aaKnown RBP4.46□□□□□ -1.7
TRAPPC13-204ENST00000438419 STARD7Q9NQZ5 370 aa4.46□□□□□ -1.7
TRAPPC13-204ENST00000438419 ITGB1BP2Q9UKP3 347 aa4.46□□□□□ -1.7
TRAPPC13-204ENST00000438419 HDAC9Q9UKV0 1011 aa4.46□□□□□ -1.7
TRAPPC13-204ENST00000438419 NDRG4Q9ULP0 352 aaKnown RBP4.46□□□□□ -1.7
TRAPPC13-204ENST00000438419 POM121BA6NF01 834 aa4.45□□□□□ -1.7
TRAPPC13-204ENST00000438419 RASA4BC9J798 803 aa4.45□□□□□ -1.7
TRAPPC13-204ENST00000438419 F8W8V4 182 aa4.45□□□□□ -1.7
TRAPPC13-204ENST00000438419 MPPED1O15442 326 aa4.45□□□□□ -1.7
TRAPPC13-204ENST00000438419 RASA4O43374 803 aa4.45□□□□□ -1.7
TRAPPC13-204ENST00000438419 TPD52L2O43399 206 aaKnown RBP4.45□□□□□ -1.7
TRAPPC13-204ENST00000438419 THAP12O43422 761 aa4.45□□□□□ -1.7
TRAPPC13-204ENST00000438419 RHOBTB3O94955 611 aa4.45□□□□□ -1.7
TRAPPC13-204ENST00000438419 LMNAP02545 664 aaKnown RBP4.45□□□□□ -1.7
TRAPPC13-204ENST00000438419 MT-ND5P03915 603 aa4.45□□□□□ -1.7
TRAPPC13-204ENST00000438419 ANXA2P07355 339 aaKnown RBP4.45□□□□□ -1.7
TRAPPC13-204ENST00000438419 IL1R1P14778 569 aa4.45□□□□□ -1.7
TRAPPC13-204ENST00000438419 TSHRP16473 764 aa4.45□□□□□ -1.7
TRAPPC13-204ENST00000438419 ACVR2AP27037 513 aa4.45□□□□□ -1.7
TRAPPC13-204ENST00000438419 FOLR3P41439 243 aa4.45□□□□□ -1.7
TRAPPC13-204ENST00000438419 STT3AP46977 705 aa4.45□□□□□ -1.7
TRAPPC13-204ENST00000438419 DGKEP52429 567 aa4.45□□□□□ -1.7
TRAPPC13-204ENST00000438419 HTRA4P83105 476 aaPredicted RBP4.45□□□□□ -1.7
TRAPPC13-204ENST00000438419 MYO1EQ12965 1108 aa4.45□□□□□ -1.7
TRAPPC13-204ENST00000438419 PTPRRQ15256 657 aa4.45□□□□□ -1.7
TRAPPC13-204ENST00000438419 RGS7BPQ6MZT1 257 aaPredicted RBP4.45□□□□□ -1.7
TRAPPC13-204ENST00000438419 UNC13DQ70J99 1090 aa4.45□□□□□ -1.7
TRAPPC13-204ENST00000438419 SLC15A3Q8IY34 581 aa4.45□□□□□ -1.7
TRAPPC13-204ENST00000438419 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.45□□□□□ -1.7
TRAPPC13-204ENST00000438419 CCDC33Q8N5R6 958 aa4.45□□□□□ -1.7
TRAPPC13-204ENST00000438419 IQCDQ96DY2 449 aa4.45□□□□□ -1.7
TRAPPC13-204ENST00000438419 FBXL20Q96IG2 436 aa4.45□□□□□ -1.7
TRAPPC13-204ENST00000438419 MYD88Q99836 296 aa4.45□□□□□ -1.7
TRAPPC13-204ENST00000438419 ALG8Q9BVK2 526 aa4.45□□□□□ -1.7
TRAPPC13-204ENST00000438419 CHST8Q9H2A9 424 aa4.45□□□□□ -1.7
TRAPPC13-204ENST00000438419 CXorf36Q9H7Y0 433 aa4.45□□□□□ -1.7
TRAPPC13-204ENST00000438419 FOXJ2Q9P0K8 574 aa4.45□□□□□ -1.7
TRAPPC13-204ENST00000438419 ZNF212Q9UDV6 495 aa4.45□□□□□ -1.7
TRAPPC13-204ENST00000438419 VWC2LB2RUY7 222 aa4.44□□□□□ -1.7
TRAPPC13-204ENST00000438419 TLR5O60602 858 aa4.44□□□□□ -1.7
TRAPPC13-204ENST00000438419 KCNA3P22001 575 aa4.44□□□□□ -1.7
TRAPPC13-204ENST00000438419 IL1R2P27930 398 aa4.44□□□□□ -1.7
TRAPPC13-204ENST00000438419 RGS19P49795 217 aa4.44□□□□□ -1.7
TRAPPC13-204ENST00000438419 PDE6CP51160 858 aa4.44□□□□□ -1.7
TRAPPC13-204ENST00000438419 ALDH5A1P51649 535 aaPredicted RBP4.44□□□□□ -1.7
TRAPPC13-204ENST00000438419 PRKAG1P54619 331 aa4.44□□□□□ -1.7
TRAPPC13-204ENST00000438419 MRPS35P82673 323 aaKnown RBP4.44□□□□□ -1.7
TRAPPC13-204ENST00000438419 ARHGEF7Q14155 803 aa4.44□□□□□ -1.7
TRAPPC13-204ENST00000438419 SLC29A2Q14542 456 aa4.44□□□□□ -1.7
TRAPPC13-204ENST00000438419 ZNF169Q14929 603 aaPredicted RBP4.44□□□□□ -1.7
TRAPPC13-204ENST00000438419 ZIK1Q3SY52 487 aaPredicted RBP4.44□□□□□ -1.7
TRAPPC13-204ENST00000438419 RNF44Q7L0R7 432 aa4.44□□□□□ -1.7
TRAPPC13-204ENST00000438419 DTX2Q86UW9 622 aa4.44□□□□□ -1.7
TRAPPC13-204ENST00000438419 ZNF280BQ86YH2 543 aa4.44□□□□□ -1.7
TRAPPC13-204ENST00000438419 LIX1LQ8IVB5 337 aa4.44□□□□□ -1.7
TRAPPC13-204ENST00000438419 ATP11CQ8NB49 1132 aa4.44□□□□□ -1.7
TRAPPC13-204ENST00000438419 BPIFB1Q8TDL5 484 aa4.44□□□□□ -1.7
TRAPPC13-204ENST00000438419 PARD3BQ8TEW8 1205 aa4.44□□□□□ -1.7
TRAPPC13-204ENST00000438419 GJA10Q969M2 543 aa4.44□□□□□ -1.7
TRAPPC13-204ENST00000438419 FKBP10Q96AY3 582 aa4.44□□□□□ -1.7
TRAPPC13-204ENST00000438419 PDLIM2Q96JY6 352 aa4.44□□□□□ -1.7
TRAPPC13-204ENST00000438419 CCDC138Q96M89 665 aa4.44□□□□□ -1.7
TRAPPC13-204ENST00000438419 ELAC2Q9BQ52 826 aaKnown RBP4.44□□□□□ -1.7
TRAPPC13-204ENST00000438419 KLC4Q9NSK0 619 aa4.44□□□□□ -1.7
TRAPPC13-204ENST00000438419 LRIT1Q9P2V4 623 aa4.44□□□□□ -1.7
TRAPPC13-204ENST00000438419 MID2Q9UJV3 735 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms