RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 SNX25Q9H3E2 840 aa19.73■□□□□ 0.75
NUP50-207ENST00000424634 SEMA4AQ9H3S1 761 aa19.73■□□□□ 0.75
NUP50-207ENST00000424634 DPEP3Q9H4B8 488 aa19.73■□□□□ 0.75
NUP50-207ENST00000424634 C8orf33Q9H7E9 229 aaPredicted RBP19.73■□□□□ 0.75
NUP50-207ENST00000424634 GKN1Q9NS71 199 aa19.73■□□□□ 0.75
NUP50-207ENST00000424634 NXF1Q9UBU9 619 aaKnown RBP19.73■□□□□ 0.75
NUP50-207ENST00000424634 ZMYM5Q9UJ78 669 aa19.73■□□□□ 0.75
NUP50-207ENST00000424634 A0A1W2PQ27 194 aa19.72■□□□□ 0.75
NUP50-207ENST00000424634 A0A1W2PQ64 194 aa19.72■□□□□ 0.75
NUP50-207ENST00000424634 A0A1W2PQD8 194 aa19.72■□□□□ 0.75
NUP50-207ENST00000424634 SOBPA7XYQ1 873 aa19.72■□□□□ 0.75
NUP50-207ENST00000424634 SPECC1L-ADORA2AF8WAN1 911 aa19.72■□□□□ 0.75
NUP50-207ENST00000424634 VNN1O95497 513 aa19.72■□□□□ 0.75
NUP50-207ENST00000424634 LMNAP02545 664 aaKnown RBP19.72■□□□□ 0.75
NUP50-207ENST00000424634 NR3C1P04150 777 aa19.72■□□□□ 0.75
NUP50-207ENST00000424634 ATICP31939 592 aa19.72■□□□□ 0.75
NUP50-207ENST00000424634 CTHP32929 405 aa19.72■□□□□ 0.75
NUP50-207ENST00000424634 AVPR1AP37288 418 aa19.72■□□□□ 0.75
NUP50-207ENST00000424634 CYP27A1Q02318 531 aa19.72■□□□□ 0.75
NUP50-207ENST00000424634 DPYDQ12882 1025 aa19.72■□□□□ 0.75
NUP50-207ENST00000424634 GAS6Q14393 721 aa19.72■□□□□ 0.75
NUP50-207ENST00000424634 OTOGLQ3ZCN5 2332 aa19.72■□□□□ 0.75
NUP50-207ENST00000424634 MDH1BQ5I0G3 518 aa19.72■□□□□ 0.75
NUP50-207ENST00000424634 KRBA2Q6ZNG9 492 aa19.72■□□□□ 0.75
NUP50-207ENST00000424634 NELL1Q92832 810 aa19.72■□□□□ 0.75
NUP50-207ENST00000424634 SPATA17Q96L03 361 aa19.72■□□□□ 0.75
NUP50-207ENST00000424634 SLC22A12Q96S37 553 aa19.72■□□□□ 0.75
NUP50-207ENST00000424634 FAM83CQ9BQN1 747 aa19.72■□□□□ 0.75
NUP50-207ENST00000424634 PRMT8Q9NR22 394 aaPredicted RBP19.72■□□□□ 0.75
NUP50-207ENST00000424634 TDP1Q9NUW8 608 aa19.72■□□□□ 0.75
NUP50-207ENST00000424634 UXTQ9UBK9 157 aaPredicted RBP19.72■□□□□ 0.75
NUP50-207ENST00000424634 ATP6V1DQ9Y5K8 247 aa19.72■□□□□ 0.75
NUP50-207ENST00000424634 GPR179Q6PRD1 2367 aa19.71■□□□□ 0.75
NUP50-207ENST00000424634 OTOL1A6NHN0 477 aaPredicted RBP19.71■□□□□ 0.75
NUP50-207ENST00000424634 PHACTR2O75167 634 aa19.71■□□□□ 0.75
NUP50-207ENST00000424634 RHOBTB3O94955 611 aa19.71■□□□□ 0.75
NUP50-207ENST00000424634 PTPN1P18031 435 aaKnown RBP19.71■□□□□ 0.75
NUP50-207ENST00000424634 GRIK1P39086 918 aa19.71■□□□□ 0.75
NUP50-207ENST00000424634 CDH8P55286 799 aa19.71■□□□□ 0.75
NUP50-207ENST00000424634 USP46P62068 366 aa19.71■□□□□ 0.75
NUP50-207ENST00000424634 TNNC1P63316 161 aa19.71■□□□□ 0.75
NUP50-207ENST00000424634 PLCB2Q00722 1185 aa19.71■□□□□ 0.75
NUP50-207ENST00000424634 MAPRE1Q15691 268 aaKnown RBP19.71■□□□□ 0.75
NUP50-207ENST00000424634 C1orf220Q5T0J3 134 aa19.71■□□□□ 0.75
NUP50-207ENST00000424634 VSTM1Q6UX27 236 aa19.71■□□□□ 0.75
NUP50-207ENST00000424634 MAMSTRQ6ZN01 415 aa19.71■□□□□ 0.75
NUP50-207ENST00000424634 RALGPS2Q86X27 583 aaPredicted RBP19.71■□□□□ 0.75
NUP50-207ENST00000424634 SYAP1Q96A49 352 aaPredicted RBP19.71■□□□□ 0.75
NUP50-207ENST00000424634 MSANTD3Q96H12 275 aa19.71■□□□□ 0.75
NUP50-207ENST00000424634 VRTNQ9H8Y1 702 aa19.71■□□□□ 0.75
NUP50-207ENST00000424634 HPS4Q9NQG7 708 aa19.71■□□□□ 0.75
NUP50-207ENST00000424634 RBM12Q9NTZ6 932 aaKnown RBP19.71■□□□□ 0.75
NUP50-207ENST00000424634 TMEM30AQ9NV96 361 aa19.71■□□□□ 0.75
NUP50-207ENST00000424634 THG1LQ9NWX6 298 aaKnown RBP19.71■□□□□ 0.75
NUP50-207ENST00000424634 ZNF202O95125 648 aa19.7■□□□□ 0.74
NUP50-207ENST00000424634 TDGF1P13385 188 aa19.7■□□□□ 0.74
NUP50-207ENST00000424634 CACNA2D1P54289 1103 aa19.7■□□□□ 0.74
NUP50-207ENST00000424634 BIRC3Q13489 604 aa19.7■□□□□ 0.74
NUP50-207ENST00000424634 NCOA4Q13772 614 aa19.7■□□□□ 0.74
NUP50-207ENST00000424634 TRIM68Q6AZZ1 485 aa19.7■□□□□ 0.74
NUP50-207ENST00000424634 ZC3H14Q6PJT7 736 aaKnown RBP19.7■□□□□ 0.74
NUP50-207ENST00000424634 CHFRQ96EP1 664 aa19.7■□□□□ 0.74
NUP50-207ENST00000424634 B3GNT5Q9BYG0 378 aa19.7■□□□□ 0.74
NUP50-207ENST00000424634 SDCBP2Q9H190 292 aa19.7■□□□□ 0.74
NUP50-207ENST00000424634 SMYD3Q9H7B4 428 aa19.7■□□□□ 0.74
NUP50-207ENST00000424634 GCNT4Q9P109 453 aa19.7■□□□□ 0.74
NUP50-207ENST00000424634 MAPK8IP1Q9UQF2 711 aa19.7■□□□□ 0.74
NUP50-207ENST00000424634 TRAF3IP3Q9Y228 551 aa19.7■□□□□ 0.74
NUP50-207ENST00000424634 C2orf78A6NCI8 922 aa19.69■□□□□ 0.74
NUP50-207ENST00000424634 A8MXQ7 604 aa19.69■□□□□ 0.74
NUP50-207ENST00000424634 CLDN5O00501 218 aa19.69■□□□□ 0.74
NUP50-207ENST00000424634 RAP1GAPP47736 663 aa19.69■□□□□ 0.74
NUP50-207ENST00000424634 AP3M2P53677 418 aa19.69■□□□□ 0.74
NUP50-207ENST00000424634 ZNF268Q14587 947 aaPredicted RBP19.69■□□□□ 0.74
NUP50-207ENST00000424634 PON2Q15165 354 aa19.69■□□□□ 0.74
NUP50-207ENST00000424634 ITPRIPL2Q3MIP1 535 aa19.69■□□□□ 0.74
NUP50-207ENST00000424634 SUMF1Q8NBK3 374 aa19.69■□□□□ 0.74
NUP50-207ENST00000424634 ZBTB44Q8NCP5 570 aa19.69■□□□□ 0.74
NUP50-207ENST00000424634 EBF3Q9H4W6 596 aa19.69■□□□□ 0.74
NUP50-207ENST00000424634 TRPC7Q9HCX4 862 aa19.69■□□□□ 0.74
NUP50-207ENST00000424634 ATG2BQ96BY7 2078 aa19.68■□□□□ 0.74
NUP50-207ENST00000424634 F8VP50 259 aa19.68■□□□□ 0.74
NUP50-207ENST00000424634 ARSAP15289 507 aa19.68■□□□□ 0.74
NUP50-207ENST00000424634 RUNX3Q13761 415 aa19.68■□□□□ 0.74
NUP50-207ENST00000424634 ZNF699Q32M78 642 aa19.68■□□□□ 0.74
NUP50-207ENST00000424634 ZACNQ401N2 412 aa19.68■□□□□ 0.74
NUP50-207ENST00000424634 CEP135Q66GS9 1140 aa19.68■□□□□ 0.74
NUP50-207ENST00000424634 C1orf228Q6PIY5 440 aa19.68■□□□□ 0.74
NUP50-207ENST00000424634 DENND5BQ6ZUT9 1274 aa19.68■□□□□ 0.74
NUP50-207ENST00000424634 SV2AQ7L0J3 742 aa19.68■□□□□ 0.74
NUP50-207ENST00000424634 ARL14EPQ8N8R7 260 aaPredicted RBP19.68■□□□□ 0.74
NUP50-207ENST00000424634 B3GALNT2Q8NCR0 500 aa19.68■□□□□ 0.74
NUP50-207ENST00000424634 TMC2Q8TDI7 906 aa19.68■□□□□ 0.74
NUP50-207ENST00000424634 C8orf48Q96LL4 319 aa19.68■□□□□ 0.74
NUP50-207ENST00000424634 CEP295NLQ96MC4 621 aa19.68■□□□□ 0.74
NUP50-207ENST00000424634 ZNF518BQ9C0D4 1074 aa19.68■□□□□ 0.74
NUP50-207ENST00000424634 KIF9Q9HAQ2 790 aa19.68■□□□□ 0.74
NUP50-207ENST00000424634 ZSCAN32Q9NX65 697 aa19.68■□□□□ 0.74
NUP50-207ENST00000424634 PCDHGA2Q9Y5H1 932 aa19.68■□□□□ 0.74
NUP50-207ENST00000424634 DMXL1Q9Y485 3027 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms