RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 MMEL1Q495T6 779 aa17.4■□□□□ 0.38
PKP4-204ENST00000421462 PDIK1LQ8N165 341 aa17.4■□□□□ 0.38
PKP4-204ENST00000421462 OR6Y1Q8NGX8 325 aa17.4■□□□□ 0.38
PKP4-204ENST00000421462 FEZF2Q8TBJ5 459 aa17.4■□□□□ 0.38
PKP4-204ENST00000421462 PHF12Q96QT6 1004 aa17.4■□□□□ 0.38
PKP4-204ENST00000421462 SENP7Q9BQF6 1050 aa17.4■□□□□ 0.38
PKP4-204ENST00000421462 DBNDD1Q9H9R9 158 aa17.4■□□□□ 0.38
PKP4-204ENST00000421462 KCNH7Q9NS40 1196 aa17.4■□□□□ 0.38
PKP4-204ENST00000421462 TBX20Q9UMR3 447 aa17.4■□□□□ 0.38
PKP4-204ENST00000421462 LOC100653049A0A140TA62 436 aa17.39■□□□□ 0.38
PKP4-204ENST00000421462 KRT34O76011 436 aa17.39■□□□□ 0.38
PKP4-204ENST00000421462 MAP3K6O95382 1288 aa17.39■□□□□ 0.38
PKP4-204ENST00000421462 STAT2P52630 851 aa17.39■□□□□ 0.38
PKP4-204ENST00000421462 TRIP10Q15642 601 aa17.39■□□□□ 0.38
PKP4-204ENST00000421462 KLHL38Q2WGJ6 581 aa17.39■□□□□ 0.38
PKP4-204ENST00000421462 TCHHL1Q5QJ38 904 aaPredicted RBP17.39■□□□□ 0.38
PKP4-204ENST00000421462 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.39■□□□□ 0.384e-7■■■■■ 30.9
PKP4-204ENST00000421462 RCOR2Q8IZ40 523 aa17.39■□□□□ 0.38
PKP4-204ENST00000421462 ARHGAP18Q8N392 663 aa17.39■□□□□ 0.38
PKP4-204ENST00000421462 PPP2R3CQ969Q6 453 aa17.39■□□□□ 0.38
PKP4-204ENST00000421462 SRPK1Q96SB4 655 aaKnown RBP17.39■□□□□ 0.38
PKP4-204ENST00000421462 APOL6Q9BWW8 343 aa17.39■□□□□ 0.38
PKP4-204ENST00000421462 ACSS3Q9H6R3 686 aa17.39■□□□□ 0.38
PKP4-204ENST00000421462 FBXO28Q9NVF7 368 aa17.39■□□□□ 0.38
PKP4-204ENST00000421462 CST8O60676 142 aa17.39■□□□□ 0.37
PKP4-204ENST00000421462 ITGB5P18084 799 aa17.39■□□□□ 0.37
PKP4-204ENST00000421462 PDE1BQ01064 536 aa17.39■□□□□ 0.37
PKP4-204ENST00000421462 SEZ6Q53EL9 994 aa17.39■□□□□ 0.37
PKP4-204ENST00000421462 PPP1R14CQ8TAE6 165 aa17.39■□□□□ 0.37
PKP4-204ENST00000421462 ACER1Q8TDN7 264 aa17.39■□□□□ 0.37
PKP4-204ENST00000421462 KMT5AQ9NQR1 393 aa17.39■□□□□ 0.37
PKP4-204ENST00000421462 KCND2Q9NZV8 630 aa17.39■□□□□ 0.37
PKP4-204ENST00000421462 PCSK1NQ9UHG2 260 aa17.39■□□□□ 0.37
PKP4-204ENST00000421462 SHOC2Q9UQ13 582 aa17.39■□□□□ 0.37
PKP4-204ENST00000421462 KBTBD13C9JR72 458 aa17.39■□□□□ 0.37
PKP4-204ENST00000421462 ZMPSTE24O75844 475 aa17.39■□□□□ 0.37
PKP4-204ENST00000421462 RXRBP28702 533 aa17.39■□□□□ 0.37
PKP4-204ENST00000421462 MYBPC2Q14324 1141 aa17.39■□□□□ 0.37
PKP4-204ENST00000421462 TRAPPC3LQ5T215 181 aa17.39■□□□□ 0.37
PKP4-204ENST00000421462 FAXCQ5TGI0 409 aa17.39■□□□□ 0.37
PKP4-204ENST00000421462 SCARA3Q6AZY7 606 aa17.39■□□□□ 0.37
PKP4-204ENST00000421462 IL31RAQ8NI17 732 aa17.39■□□□□ 0.37
PKP4-204ENST00000421462 NAT14Q8WUY8 206 aa17.39■□□□□ 0.37
PKP4-204ENST00000421462 SNRNP27Q8WVK2 155 aaKnown RBP17.39■□□□□ 0.37
PKP4-204ENST00000421462 GCNAQ96QF7 691 aa17.39■□□□□ 0.37
PKP4-204ENST00000421462 MMP19Q99542 508 aa17.39■□□□□ 0.37
PKP4-204ENST00000421462 PI4KBQ9UBF8 816 aa17.39■□□□□ 0.37
PKP4-204ENST00000421462 IQANK1A0A1B0GTG1 560 aa17.38■□□□□ 0.37
PKP4-204ENST00000421462 MYOCOSA0A1B0GUC4 107 aa17.38■□□□□ 0.37
PKP4-204ENST00000421462 PLSCR1O15162 318 aa17.38■□□□□ 0.37
PKP4-204ENST00000421462 TM7SF2O76062 418 aa17.38■□□□□ 0.37
PKP4-204ENST00000421462 P4HBP07237 508 aaKnown RBP17.38■□□□□ 0.37
PKP4-204ENST00000421462 VAV1P15498 845 aa17.38■□□□□ 0.37
PKP4-204ENST00000421462 RPL22P35268 128 aaKnown RBP17.38■□□□□ 0.37
PKP4-204ENST00000421462 ACTR3P61158 418 aa17.38■□□□□ 0.37
PKP4-204ENST00000421462 KRT72Q14CN4 511 aa17.38■□□□□ 0.37
PKP4-204ENST00000421462 TRMT5Q32P41 509 aaKnown RBP17.38■□□□□ 0.37
PKP4-204ENST00000421462 RSPH3Q86UC2 560 aa17.38■□□□□ 0.37
PKP4-204ENST00000421462 TRIM11Q96F44 468 aa17.38■□□□□ 0.37
PKP4-204ENST00000421462 MMADHCQ9H3L0 296 aaPredicted RBP17.38■□□□□ 0.37
PKP4-204ENST00000421462 CHCHD3Q9NX63 227 aaKnown RBP17.38■□□□□ 0.37
PKP4-204ENST00000421462 ZNF219Q9P2Y4 722 aaPredicted RBP17.38■□□□□ 0.37
PKP4-204ENST00000421462 ATXN10Q9UBB4 475 aa17.38■□□□□ 0.37
PKP4-204ENST00000421462 SLC4A7Q9Y6M7 1214 aa17.38■□□□□ 0.37
PKP4-204ENST00000421462 ZNF862O60290 1169 aa17.38■□□□□ 0.37
PKP4-204ENST00000421462 TOM1L1O75674 476 aa17.38■□□□□ 0.37
PKP4-204ENST00000421462 HLA-DRAP01903 254 aa17.38■□□□□ 0.37
PKP4-204ENST00000421462 CRKP46108 304 aa17.38■□□□□ 0.37
PKP4-204ENST00000421462 NPTX2P47972 431 aa17.38■□□□□ 0.37
PKP4-204ENST00000421462 NOMO3P69849 1222 aa17.38■□□□□ 0.37
PKP4-204ENST00000421462 GTF2BQ00403 316 aa17.38■□□□□ 0.37
PKP4-204ENST00000421462 DENND5BQ6ZUT9 1274 aa17.38■□□□□ 0.37
PKP4-204ENST00000421462 NET1Q7Z628 596 aaPredicted RBP17.38■□□□□ 0.37
PKP4-204ENST00000421462 UNC45BQ8IWX7 931 aa17.38■□□□□ 0.37
PKP4-204ENST00000421462 PPIL6Q8IXY8 311 aa17.38■□□□□ 0.37
PKP4-204ENST00000421462 ZNF516Q92618 1163 aa17.38■□□□□ 0.37
PKP4-204ENST00000421462 APOPT1Q96IL0 206 aa17.38■□□□□ 0.37
PKP4-204ENST00000421462 TRIM56Q9BRZ2 755 aaKnown RBP17.38■□□□□ 0.37
PKP4-204ENST00000421462 PICK1Q9NRD5 415 aa17.38■□□□□ 0.37
PKP4-204ENST00000421462 TCRBV9S1A1TA0A576 114 aa17.37■□□□□ 0.37
PKP4-204ENST00000421462 FAM200BP0CF97 657 aa17.37■□□□□ 0.37
PKP4-204ENST00000421462 OGDHQ02218 1023 aa17.37■□□□□ 0.37
PKP4-204ENST00000421462 CYP24A1Q07973 514 aa17.37■□□□□ 0.37
PKP4-204ENST00000421462 HIC1Q14526 733 aa17.37■□□□□ 0.37
PKP4-204ENST00000421462 HSF5Q4G112 596 aaPredicted RBP17.37■□□□□ 0.37
PKP4-204ENST00000421462 SPDYAQ5MJ70 313 aa17.37■□□□□ 0.37
PKP4-204ENST00000421462 RABGAP1LQ5R372 815 aa17.37■□□□□ 0.37
PKP4-204ENST00000421462 SH3BP5LQ7L8J4 393 aa17.37■□□□□ 0.37
PKP4-204ENST00000421462 NUDCD3Q8IVD9 361 aa17.37■□□□□ 0.37
PKP4-204ENST00000421462 CPXCR1Q8N123 301 aa17.37■□□□□ 0.37
PKP4-204ENST00000421462 MZB1Q8WU39 189 aa17.37■□□□□ 0.37
PKP4-204ENST00000421462 TAGLN3Q9UI15 199 aa17.37■□□□□ 0.37
PKP4-204ENST00000421462 DNAJC6O75061 913 aa17.37■□□□□ 0.37
PKP4-204ENST00000421462 MYCLP12524 364 aaPredicted RBP17.37■□□□□ 0.37
PKP4-204ENST00000421462 QARSP47897 775 aaKnown RBP17.37■□□□□ 0.37
PKP4-204ENST00000421462 ATXN3P54252 364 aaPredicted RBP17.37■□□□□ 0.37
PKP4-204ENST00000421462 WNT7BP56706 349 aa17.37■□□□□ 0.37
PKP4-204ENST00000421462 ZNF200P98182 395 aaPredicted RBP17.37■□□□□ 0.37
PKP4-204ENST00000421462 SPP2Q13103 211 aa17.37■□□□□ 0.37
PKP4-204ENST00000421462 MAP7Q14244 749 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 215 ms