RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 MOGAT1Q96PD6 335 aa5.51□□□□□ -1.53
HMGB1P49-201ENST00000418882 BBC3Q96PG8 261 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P49-201ENST00000418882 NELL2Q99435 816 aa5.51□□□□□ -1.53
HMGB1P49-201ENST00000418882 FAM50BQ9Y247 325 aa5.51□□□□□ -1.53
HMGB1P49-201ENST00000418882 SNX14Q9Y5W7 946 aa5.51□□□□□ -1.53
HMGB1P49-201ENST00000418882 APAF1O14727 1248 aa5.5□□□□□ -1.53
HMGB1P49-201ENST00000418882 URI1O94763 535 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P49-201ENST00000418882 IL6RP08887 468 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P49-201ENST00000418882 ZFXP17010 805 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P49-201ENST00000418882 ZKSCAN1P17029 563 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P49-201ENST00000418882 PIK3CBP42338 1070 aa5.5□□□□□ -1.53
HMGB1P49-201ENST00000418882 ATXN1P54253 815 aaKnown RBP5.5□□□□□ -1.53
HMGB1P49-201ENST00000418882 HTRA4P83105 476 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P49-201ENST00000418882 KRT17Q04695 432 aa5.5□□□□□ -1.53
HMGB1P49-201ENST00000418882 TREML2Q5T2D2 321 aa5.5□□□□□ -1.53
HMGB1P49-201ENST00000418882 DEPDC1Q5TB30 811 aa5.5□□□□□ -1.53
HMGB1P49-201ENST00000418882 SFRP4Q6FHJ7 346 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P49-201ENST00000418882 NTN5Q8WTR8 489 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P49-201ENST00000418882 DUSP26Q9BV47 211 aa5.5□□□□□ -1.53
HMGB1P49-201ENST00000418882 ALG8Q9BVK2 526 aa5.5□□□□□ -1.53
HMGB1P49-201ENST00000418882 RIOX1Q9H6W3 641 aa5.5□□□□□ -1.53
HMGB1P49-201ENST00000418882 ZNF287Q9HBT7 754 aa5.5□□□□□ -1.53
HMGB1P49-201ENST00000418882 KIAA1586Q9HCI6 787 aa5.5□□□□□ -1.53
HMGB1P49-201ENST00000418882 A1CFQ9NQ94 594 aaKnown RBP5.5□□□□□ -1.53
HMGB1P49-201ENST00000418882 EHD3Q9NZN3 535 aa5.5□□□□□ -1.53
HMGB1P49-201ENST00000418882 OGDHLQ9ULD0 1010 aa5.5□□□□□ -1.53
HMGB1P49-201ENST00000418882 MBD3L4A6NDZ8 208 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P49-201ENST00000418882 MBD3L3A6NE82 208 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P49-201ENST00000418882 LRRC3CA6NJW4 275 aa5.49□□□□□ -1.53
HMGB1P49-201ENST00000418882 H7C4K7 107 aa5.49□□□□□ -1.53
HMGB1P49-201ENST00000418882 MGEA5O60502 916 aa5.49□□□□□ -1.53
HMGB1P49-201ENST00000418882 FESP07332 822 aa5.49□□□□□ -1.53
HMGB1P49-201ENST00000418882 CYP2C9P11712 490 aa5.49□□□□□ -1.53
HMGB1P49-201ENST00000418882 LRPAP1P30533 357 aa5.49□□□□□ -1.53
HMGB1P49-201ENST00000418882 GNALP38405 381 aa5.49□□□□□ -1.53
HMGB1P49-201ENST00000418882 E2F2Q14209 437 aa5.49□□□□□ -1.53
HMGB1P49-201ENST00000418882 PPP4R4Q6NUP7 873 aa5.49□□□□□ -1.53
HMGB1P49-201ENST00000418882 FBXO42Q6P3S6 717 aa5.49□□□□□ -1.53
HMGB1P49-201ENST00000418882 PRIMA1Q86XR5 153 aa5.49□□□□□ -1.53
HMGB1P49-201ENST00000418882 KRT78Q8N1N4 520 aa5.49□□□□□ -1.53
HMGB1P49-201ENST00000418882 CAGE1Q8TC20 777 aa5.49□□□□□ -1.53
HMGB1P49-201ENST00000418882 SPSB4Q96A44 273 aa5.49□□□□□ -1.53
HMGB1P49-201ENST00000418882 R3HDM4Q96D70 268 aa5.49□□□□□ -1.53
HMGB1P49-201ENST00000418882 SARGQ9BW04 601 aa5.49□□□□□ -1.53
HMGB1P49-201ENST00000418882 STK31Q9BXU1 1019 aa5.49□□□□□ -1.53
HMGB1P49-201ENST00000418882 CHST8Q9H2A9 424 aa5.49□□□□□ -1.53
HMGB1P49-201ENST00000418882 SEMA4GQ9NTN9 838 aa5.49□□□□□ -1.53
HMGB1P49-201ENST00000418882 DNMT3BQ9UBC3 853 aaKnown RBP5.49□□□□□ -1.53
HMGB1P49-201ENST00000418882 CORO2BQ9UQ03 480 aa5.49□□□□□ -1.53
HMGB1P49-201ENST00000418882 INSL6Q9Y581 213 aa5.49□□□□□ -1.53
HMGB1P49-201ENST00000418882 ENTPD2Q9Y5L3 495 aa5.49□□□□□ -1.53
HMGB1P49-201ENST00000418882 FNDC1Q4ZHG4 1894 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P49-201ENST00000418882 A1L4Q6 167 aa5.48□□□□□ -1.53
HMGB1P49-201ENST00000418882 SLC16A3O15427 465 aaKnown RBP5.48□□□□□ -1.53
HMGB1P49-201ENST00000418882 PQBP1O60828 265 aaKnown RBP5.48□□□□□ -1.53
HMGB1P49-201ENST00000418882 EBLN1P0CF75 366 aa5.48□□□□□ -1.53
HMGB1P49-201ENST00000418882 KLRC1P26715 233 aa5.48□□□□□ -1.53
HMGB1P49-201ENST00000418882 MGAT5BQ3V5L5 792 aa5.48□□□□□ -1.53
HMGB1P49-201ENST00000418882 TSTD2Q5T7W7 516 aa5.48□□□□□ -1.53
HMGB1P49-201ENST00000418882 FCRL6Q6DN72 434 aa5.48□□□□□ -1.53
HMGB1P49-201ENST00000418882 ARHGEF25Q86VW2 580 aa5.48□□□□□ -1.53
HMGB1P49-201ENST00000418882 ADGRG3Q86Y34 549 aa5.48□□□□□ -1.53
HMGB1P49-201ENST00000418882 RASAL3Q86YV0 1011 aa5.48□□□□□ -1.53
HMGB1P49-201ENST00000418882 SLC15A3Q8IY34 581 aa5.48□□□□□ -1.53
HMGB1P49-201ENST00000418882 BOLLQ8N9W6 283 aaKnown RBP5.48□□□□□ -1.53
HMGB1P49-201ENST00000418882 PPP2R3CQ969Q6 453 aa5.48□□□□□ -1.53
HMGB1P49-201ENST00000418882 MSLNLQ96KJ4 702 aa5.48□□□□□ -1.53
HMGB1P49-201ENST00000418882 BTBD1Q9H0C5 482 aa5.48□□□□□ -1.53
HMGB1P49-201ENST00000418882 GBA2Q9HCG7 927 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P49-201ENST00000418882 SERTAD4Q9NUC0 356 aa5.48□□□□□ -1.53
HMGB1P49-201ENST00000418882 MID2Q9UJV3 735 aa5.48□□□□□ -1.53
HMGB1P49-201ENST00000418882 CDY1Q9Y6F8 540 aa5.48□□□□□ -1.53
HMGB1P49-201ENST00000418882 H0YIZ8 118 aa5.47□□□□□ -1.53
HMGB1P49-201ENST00000418882 ZNF213O14771 459 aa5.47□□□□□ -1.53
HMGB1P49-201ENST00000418882 IGLV2-14P01704 120 aa5.47□□□□□ -1.53
HMGB1P49-201ENST00000418882 XRCC6P12956 609 aaKnown RBP eCLIP5.47□□□□□ -1.53
HMGB1P49-201ENST00000418882 DRD4P21917 467 aa5.47□□□□□ -1.53
HMGB1P49-201ENST00000418882 PDE6CP51160 858 aa5.47□□□□□ -1.53
HMGB1P49-201ENST00000418882 PROK1P58294 105 aa5.47□□□□□ -1.53
HMGB1P49-201ENST00000418882 BMPR2Q13873 1038 aa5.47□□□□□ -1.53
HMGB1P49-201ENST00000418882 NPY5RQ15761 445 aa5.47□□□□□ -1.53
HMGB1P49-201ENST00000418882 ERCC6LQ2NKX8 1250 aa5.47□□□□□ -1.53
HMGB1P49-201ENST00000418882 COBLL1Q53SF7 1204 aa5.47□□□□□ -1.53
HMGB1P49-201ENST00000418882 ZNF618Q5T7W0 954 aa5.47□□□□□ -1.53
HMGB1P49-201ENST00000418882 DPY19L3Q6ZPD9 716 aa5.47□□□□□ -1.53
HMGB1P49-201ENST00000418882 UNC13DQ70J99 1090 aa5.47□□□□□ -1.53
HMGB1P49-201ENST00000418882 AMIGO2Q86SJ2 522 aa5.47□□□□□ -1.53
HMGB1P49-201ENST00000418882 ABRAQ8N0Z2 381 aa5.47□□□□□ -1.53
HMGB1P49-201ENST00000418882 DNAJB14Q8TBM8 379 aa5.47□□□□□ -1.53
HMGB1P49-201ENST00000418882 ATRIPQ8WXE1 791 aa5.47□□□□□ -1.53
HMGB1P49-201ENST00000418882 PHKBQ93100 1093 aa5.47□□□□□ -1.53
HMGB1P49-201ENST00000418882 TTC17Q96AE7 1141 aa5.47□□□□□ -1.53
HMGB1P49-201ENST00000418882 UROC1Q96N76 676 aa5.47□□□□□ -1.53
HMGB1P49-201ENST00000418882 GLOD4Q9HC38 313 aa5.47□□□□□ -1.53
HMGB1P49-201ENST00000418882 XPNPEP3Q9NQH7 507 aa5.47□□□□□ -1.53
HMGB1P49-201ENST00000418882 ARHGEF3Q9NR81 526 aa5.47□□□□□ -1.53
HMGB1P49-201ENST00000418882 DLL3Q9NYJ7 618 aa5.47□□□□□ -1.53
HMGB1P49-201ENST00000418882 SLC17A6Q9P2U8 582 aa5.47□□□□□ -1.53
HMGB1P49-201ENST00000418882 ARPP21Q9UBL0 812 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P49-201ENST00000418882 CCDC151A5D8V7 595 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms