RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 PSMC4P43686 418 aa17.68■□□□□ 0.42
NUP50-203ENST00000407019 PDIA2Q13087 525 aaKnown RBP17.68■□□□□ 0.42
NUP50-203ENST00000407019 TMEM132DQ14C87 1099 aa17.68■□□□□ 0.42
NUP50-203ENST00000407019 KYAT1Q16773 422 aa17.68■□□□□ 0.42
NUP50-203ENST00000407019 HP1BP3Q5SSJ5 553 aaPredicted RBP17.68■□□□□ 0.42
NUP50-203ENST00000407019 RFX6Q8HWS3 928 aa17.68■□□□□ 0.42
NUP50-203ENST00000407019 LINC01465Q8N7H1 131 aa17.68■□□□□ 0.42
NUP50-203ENST00000407019 KCTD6Q8NC69 237 aa17.68■□□□□ 0.42
NUP50-203ENST00000407019 SGSM3Q96HU1 749 aa17.68■□□□□ 0.42
NUP50-203ENST00000407019 MAGEB18Q96M61 343 aa17.68■□□□□ 0.42
NUP50-203ENST00000407019 TGS1Q96RS0 853 aaKnown RBP17.68■□□□□ 0.42
NUP50-203ENST00000407019 PPCSQ9HAB8 311 aa17.68■□□□□ 0.42
NUP50-203ENST00000407019 UBN1Q9NPG3 1134 aa17.68■□□□□ 0.42
NUP50-203ENST00000407019 POC1B-GALNT4F8VUJ3 575 aa17.67■□□□□ 0.42
NUP50-203ENST00000407019 RNF8O76064 485 aa17.67■□□□□ 0.42
NUP50-203ENST00000407019 SUN1O94901 812 aa17.67■□□□□ 0.42
NUP50-203ENST00000407019 HMGCRP04035 888 aa17.67■□□□□ 0.42
NUP50-203ENST00000407019 MIPP30301 263 aa17.67■□□□□ 0.42
NUP50-203ENST00000407019 CTCFP49711 727 aaPredicted RBP17.67■□□□□ 0.42
NUP50-203ENST00000407019 HIF1AQ16665 826 aa17.67■□□□□ 0.42
NUP50-203ENST00000407019 SLC10A6Q3KNW5 377 aa17.67■□□□□ 0.42
NUP50-203ENST00000407019 TRABD2AQ86V40 505 aa17.67■□□□□ 0.42
NUP50-203ENST00000407019 PPIL6Q8IXY8 311 aa17.67■□□□□ 0.42
NUP50-203ENST00000407019 RSAD2Q8WXG1 361 aa17.67■□□□□ 0.42
NUP50-203ENST00000407019 HPDLQ96IR7 371 aa17.67■□□□□ 0.42
NUP50-203ENST00000407019 HEXIM2Q96MH2 286 aaKnown RBP17.67■□□□□ 0.42
NUP50-203ENST00000407019 ADPGKQ9BRR6 497 aa17.67■□□□□ 0.42
NUP50-203ENST00000407019 PHACTR1Q9C0D0 580 aa17.67■□□□□ 0.42
NUP50-203ENST00000407019 KLC4Q9NSK0 619 aa17.67■□□□□ 0.42
NUP50-203ENST00000407019 HAUS2Q9NVX0 235 aa17.67■□□□□ 0.42
NUP50-203ENST00000407019 PCSK1NQ9UHG2 260 aa17.67■□□□□ 0.42
NUP50-203ENST00000407019 FAM47DPA6NHR8 397 aa17.67■□□□□ 0.42
NUP50-203ENST00000407019 VTNP04004 478 aa17.67■□□□□ 0.42
NUP50-203ENST00000407019 CD48P09326 243 aa17.67■□□□□ 0.42
NUP50-203ENST00000407019 ARF4P18085 180 aaPredicted RBP17.67■□□□□ 0.42
NUP50-203ENST00000407019 GPD2P43304 727 aa17.67■□□□□ 0.42
NUP50-203ENST00000407019 GDF10P55107 478 aa17.67■□□□□ 0.42
NUP50-203ENST00000407019 ADCY1Q08828 1119 aa17.67■□□□□ 0.42
NUP50-203ENST00000407019 XRCC4Q13426 336 aa17.67■□□□□ 0.42
NUP50-203ENST00000407019 GJC2Q5T442 439 aaPredicted RBP17.67■□□□□ 0.42
NUP50-203ENST00000407019 FAM102AQ5T9C2 384 aaPredicted RBP17.67■□□□□ 0.42
NUP50-203ENST00000407019 CAPN12Q6ZSI9 719 aa17.67■□□□□ 0.42
NUP50-203ENST00000407019 CMASQ8NFW8 434 aaPredicted RBP17.67■□□□□ 0.42
NUP50-203ENST00000407019 ASNSD1Q9NWL6 643 aa17.67■□□□□ 0.42
NUP50-203ENST00000407019 RNF181Q9P0P0 153 aa17.67■□□□□ 0.42
NUP50-203ENST00000407019 SLC12A4Q9UP95 1085 aa17.67■□□□□ 0.42
NUP50-203ENST00000407019 AGAP1Q9UPQ3 857 aa17.67■□□□□ 0.42
NUP50-203ENST00000407019 SBF1O95248 1867 aa17.66■□□□□ 0.42
NUP50-203ENST00000407019 TRUB2O95900 331 aaKnown RBP17.66■□□□□ 0.42
NUP50-203ENST00000407019 ARL4CP56559 192 aa17.66■□□□□ 0.42
NUP50-203ENST00000407019 IL9RQ01113 521 aa17.66■□□□□ 0.42
NUP50-203ENST00000407019 ICE2Q659A1 982 aa17.66■□□□□ 0.42
NUP50-203ENST00000407019 ILDR2Q71H61 639 aa17.66■□□□□ 0.42
NUP50-203ENST00000407019 SPATA21Q7Z572 469 aa17.66■□□□□ 0.42
NUP50-203ENST00000407019 CPT1BQ92523 772 aa17.66■□□□□ 0.42
NUP50-203ENST00000407019 HSPH1Q92598 858 aa17.66■□□□□ 0.42
NUP50-203ENST00000407019 C10orf88Q9H8K7 445 aa17.66■□□□□ 0.42
NUP50-203ENST00000407019 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.66■□□□□ 0.424e-8■■■■■ 51.6
NUP50-203ENST00000407019 ITGA11Q9UKX5 1188 aa17.66■□□□□ 0.42
NUP50-203ENST00000407019 BARX2Q9UMQ3 279 aaPredicted RBP17.66■□□□□ 0.42
NUP50-203ENST00000407019 USP18Q9UMW8 372 aa17.66■□□□□ 0.42
NUP50-203ENST00000407019 COL1A2P08123 1366 aa17.66■□□□□ 0.42
NUP50-203ENST00000407019 GOLGA8MH3BSY2 632 aa17.65■□□□□ 0.42
NUP50-203ENST00000407019 APOC4-APOC2K7ER74 178 aa17.65■□□□□ 0.42
NUP50-203ENST00000407019 APOC2P02655 101 aa17.65■□□□□ 0.42
NUP50-203ENST00000407019 ZKSCAN8Q15776 578 aaPredicted RBP17.65■□□□□ 0.42
NUP50-203ENST00000407019 TAPT1Q6NXT6 567 aa17.65■□□□□ 0.42
NUP50-203ENST00000407019 UBA3Q8TBC4 463 aa17.65■□□□□ 0.42
NUP50-203ENST00000407019 TRABDQ9H4I3 376 aa17.65■□□□□ 0.42
NUP50-203ENST00000407019 ABCF3Q9NUQ8 709 aa17.65■□□□□ 0.42
NUP50-203ENST00000407019 SENP1Q9P0U3 644 aa17.65■□□□□ 0.42
NUP50-203ENST00000407019 SLC24A2Q9UI40 661 aa17.65■□□□□ 0.42
NUP50-203ENST00000407019 PRPF4O43172 522 aaKnown RBP eCLIP17.65■□□□□ 0.424e-7■■■■□ 23.9
NUP50-203ENST00000407019 KRT15P19012 456 aa17.65■□□□□ 0.42
NUP50-203ENST00000407019 RPL22P35268 128 aaKnown RBP17.65■□□□□ 0.42
NUP50-203ENST00000407019 PCK1P35558 622 aa17.65■□□□□ 0.42
NUP50-203ENST00000407019 ZNF143P52747 638 aaPredicted RBP17.65■□□□□ 0.42
NUP50-203ENST00000407019 NDST1P52848 882 aa17.65■□□□□ 0.42
NUP50-203ENST00000407019 RBP5P82980 135 aa17.65■□□□□ 0.42
NUP50-203ENST00000407019 INCA1Q0VD86 236 aa17.65■□□□□ 0.42
NUP50-203ENST00000407019 RASA2Q15283 850 aa17.65■□□□□ 0.42
NUP50-203ENST00000407019 TAF5Q15542 800 aa17.65■□□□□ 0.42
NUP50-203ENST00000407019 ANKRD22Q5VYY1 191 aa17.65■□□□□ 0.42
NUP50-203ENST00000407019 DPH6Q7L8W6 267 aa17.65■□□□□ 0.42
NUP50-203ENST00000407019 ANKMY2Q8IV38 441 aa17.65■□□□□ 0.42
NUP50-203ENST00000407019 FUKQ8N0W3 1084 aa17.65■□□□□ 0.42
NUP50-203ENST00000407019 NAT8LQ8N9F0 302 aa17.65■□□□□ 0.42
NUP50-203ENST00000407019 PPTC7Q8NI37 304 aa17.65■□□□□ 0.42
NUP50-203ENST00000407019 CALN1Q9BXU9 219 aa17.65■□□□□ 0.42
NUP50-203ENST00000407019 RSAD1Q9HA92 442 aa17.65■□□□□ 0.42
NUP50-203ENST00000407019 VTA1Q9NP79 307 aa17.65■□□□□ 0.42
NUP50-203ENST00000407019 ARL2BPQ9Y2Y0 163 aa17.65■□□□□ 0.42
NUP50-203ENST00000407019 C2CD2Q9Y426 696 aa17.65■□□□□ 0.42
NUP50-203ENST00000407019 EVPLQ92817 2033 aa17.65■□□□□ 0.42
NUP50-203ENST00000407019 MCF2LO15068 1137 aa17.64■□□□□ 0.41
NUP50-203ENST00000407019 BANF1O75531 89 aa17.64■□□□□ 0.41
NUP50-203ENST00000407019 STAU1O95793 577 aaKnown RBP17.64■□□□□ 0.41
NUP50-203ENST00000407019 ZNF286BP0CG31 522 aa17.64■□□□□ 0.41
NUP50-203ENST00000407019 GPD1P21695 349 aa17.64■□□□□ 0.41
NUP50-203ENST00000407019 PHBP35232 272 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms