RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 PPP1R36Q96LQ0 422 aa18.42■□□□□ 0.54
SNED1-204ENST00000401884 SUDS3Q9H7L9 328 aaPredicted RBP18.42■□□□□ 0.54
SNED1-204ENST00000401884 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.42■□□□□ 0.54
SNED1-204ENST00000401884 LOC100653049A0A140TA62 436 aa18.42■□□□□ 0.54
SNED1-204ENST00000401884 KRT34O76011 436 aa18.42■□□□□ 0.54
SNED1-204ENST00000401884 C4orf22Q6V702 233 aa18.42■□□□□ 0.54
SNED1-204ENST00000401884 USP33Q8TEY7 942 aa18.42■□□□□ 0.54
SNED1-204ENST00000401884 TMEM176AQ96HP8 235 aa18.42■□□□□ 0.54
SNED1-204ENST00000401884 F8VP50 259 aa18.41■□□□□ 0.54
SNED1-204ENST00000401884 SSTR1P30872 391 aa18.41■□□□□ 0.54
SNED1-204ENST00000401884 SPDYCQ5MJ68 293 aa18.41■□□□□ 0.54
SNED1-204ENST00000401884 CCDC33Q8N5R6 958 aa18.41■□□□□ 0.54
SNED1-204ENST00000401884 FAM172AQ8WUF8 416 aa18.41■□□□□ 0.54
SNED1-204ENST00000401884 ZNF669Q96BR6 464 aaPredicted RBP18.41■□□□□ 0.54
SNED1-204ENST00000401884 BATF3Q9NR55 127 aa18.41■□□□□ 0.54
SNED1-204ENST00000401884 THEGQ9P2T0 379 aa18.41■□□□□ 0.54
SNED1-204ENST00000401884 A0A087WZ62 844 aa18.41■□□□□ 0.54
SNED1-204ENST00000401884 CDH8P55286 799 aa18.41■□□□□ 0.54
SNED1-204ENST00000401884 GPRC5AQ8NFJ5 357 aa18.41■□□□□ 0.54
SNED1-204ENST00000401884 FDXACB1Q9BRP7 624 aaPredicted RBP18.41■□□□□ 0.54
SNED1-204ENST00000401884 CXorf56Q9H5V9 222 aa18.41■□□□□ 0.54
SNED1-204ENST00000401884 CASZ1Q86V15 1759 aa18.41■□□□□ 0.54
SNED1-204ENST00000401884 SLC7A14Q8TBB6 771 aa18.41■□□□□ 0.54
SNED1-204ENST00000401884 CENPKQ9BS16 269 aa18.41■□□□□ 0.54
SNED1-204ENST00000401884 SPATC1LQ9H0A9 340 aa18.41■□□□□ 0.54
SNED1-204ENST00000401884 NEMP1O14524 444 aa18.41■□□□□ 0.54
SNED1-204ENST00000401884 USP10Q14694 798 aaKnown RBP18.41■□□□□ 0.54
SNED1-204ENST00000401884 LY6KQ17RY6 165 aa18.41■□□□□ 0.54
SNED1-204ENST00000401884 LRRC36Q1X8D7 754 aa18.41■□□□□ 0.54
SNED1-204ENST00000401884 NOTUMQ6P988 496 aa18.41■□□□□ 0.54
SNED1-204ENST00000401884 SHISA4Q96DD7 197 aa18.41■□□□□ 0.54
SNED1-204ENST00000401884 CYP2C8P10632 490 aa18.4■□□□□ 0.54
SNED1-204ENST00000401884 SERPINB4P48594 390 aa18.4■□□□□ 0.54
SNED1-204ENST00000401884 IFT43Q96FT9 208 aa18.4■□□□□ 0.54
SNED1-204ENST00000401884 M0R2N6 131 aa18.4■□□□□ 0.54
SNED1-204ENST00000401884 VTNP04004 478 aa18.4■□□□□ 0.54
SNED1-204ENST00000401884 SLC26A2P50443 739 aa18.4■□□□□ 0.54
SNED1-204ENST00000401884 KLC1Q07866 573 aa18.4■□□□□ 0.54
SNED1-204ENST00000401884 R3HDM1Q15032 1099 aaKnown RBP18.4■□□□□ 0.54
SNED1-204ENST00000401884 TRIML2Q8N7C3 387 aa18.4■□□□□ 0.54
SNED1-204ENST00000401884 KLK14Q9P0G3 267 aa18.4■□□□□ 0.54
SNED1-204ENST00000401884 FAF1Q9UNN5 650 aaPredicted RBP18.4■□□□□ 0.54
SNED1-204ENST00000401884 PTK6Q13882 451 aa18.4■□□□□ 0.54
SNED1-204ENST00000401884 PDK2Q15119 407 aa18.4■□□□□ 0.54
SNED1-204ENST00000401884 SLC35G1Q2M3R5 365 aa18.4■□□□□ 0.54
SNED1-204ENST00000401884 ANO5Q75V66 913 aa18.4■□□□□ 0.54
SNED1-204ENST00000401884 CYP3A43Q9HB55 503 aa18.4■□□□□ 0.54
SNED1-204ENST00000401884 SUN2Q9UH99 717 aa18.4■□□□□ 0.54
SNED1-204ENST00000401884 CYP1A2P05177 515 aa18.39■□□□□ 0.54
SNED1-204ENST00000401884 CTSHP09668 335 aa18.39■□□□□ 0.54
SNED1-204ENST00000401884 YWHAHQ04917 246 aaPredicted RBP18.39■□□□□ 0.54
SNED1-204ENST00000401884 CACNB2Q08289 660 aaPredicted RBP18.39■□□□□ 0.54
SNED1-204ENST00000401884 KIZQ2M2Z5 673 aa18.39■□□□□ 0.54
SNED1-204ENST00000401884 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.39■□□□□ 0.54
SNED1-204ENST00000401884 PDCD6IPQ8WUM4 868 aaKnown RBP18.39■□□□□ 0.54
SNED1-204ENST00000401884 SPON2Q9BUD6 331 aa18.39■□□□□ 0.54
SNED1-204ENST00000401884 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.39■□□□□ 0.54
SNED1-204ENST00000401884 UBQLN1Q9UMX0 589 aaKnown RBP18.39■□□□□ 0.54
SNED1-204ENST00000401884 RPS6KL1Q9Y6S9 549 aa18.39■□□□□ 0.54
SNED1-204ENST00000401884 ZSCAN5DPP0CG00 497 aa18.39■□□□□ 0.53
SNED1-204ENST00000401884 CLK2P49760 499 aaKnown RBP18.39■□□□□ 0.53
SNED1-204ENST00000401884 OAZ1P54368 228 aa18.39■□□□□ 0.53
SNED1-204ENST00000401884 AUHQ13825 339 aaKnown RBP18.39■□□□□ 0.53
SNED1-204ENST00000401884 DNAJC9Q8WXX5 260 aa18.39■□□□□ 0.53
SNED1-204ENST00000401884 FAM84AQ96KN4 292 aa18.39■□□□□ 0.53
SNED1-204ENST00000401884 RXFP1Q9HBX9 757 aa18.39■□□□□ 0.53
SNED1-204ENST00000401884 NALCNQ8IZF0 1738 aa18.39■□□□□ 0.53
SNED1-204ENST00000401884 NVLO15381 856 aaKnown RBP18.39■□□□□ 0.53
SNED1-204ENST00000401884 GHRP10912 638 aa18.39■□□□□ 0.53
SNED1-204ENST00000401884 PTGER2P43116 358 aa18.39■□□□□ 0.53
SNED1-204ENST00000401884 RRP1BQ14684 758 aaKnown RBP18.39■□□□□ 0.53
SNED1-204ENST00000401884 UGP2Q16851 508 aa18.39■□□□□ 0.53
SNED1-204ENST00000401884 ZNF484Q5JVG2 852 aa18.39■□□□□ 0.53
SNED1-204ENST00000401884 SLC26A11Q86WA9 606 aa18.39■□□□□ 0.53
SNED1-204ENST00000401884 ERO1BQ86YB8 467 aa18.39■□□□□ 0.53
SNED1-204ENST00000401884 TFB1MQ8WVM0 346 aaKnown RBP18.39■□□□□ 0.53
SNED1-204ENST00000401884 ATXN2LQ8WWM7 1075 aaKnown RBP18.39■□□□□ 0.53
SNED1-204ENST00000401884 SP110Q9HB58 689 aa18.39■□□□□ 0.53
SNED1-204ENST00000401884 CTNNAL1Q9UBT7 734 aa18.39■□□□□ 0.53
SNED1-204ENST00000401884 TRAPPC12Q8WVT3 735 aa18.39■□□□□ 0.53
SNED1-204ENST00000401884 GNGT2O14610 69 aa18.38■□□□□ 0.53
SNED1-204ENST00000401884 PLSCR1O15162 318 aa18.38■□□□□ 0.53
SNED1-204ENST00000401884 KLHL2O95198 593 aa18.38■□□□□ 0.53
SNED1-204ENST00000401884 ANP32DO95626 131 aa18.38■□□□□ 0.53
SNED1-204ENST00000401884 GCLCP48506 637 aaPredicted RBP18.38■□□□□ 0.53
SNED1-204ENST00000401884 TAF6P49848 677 aa18.38■□□□□ 0.53
SNED1-204ENST00000401884 DGKDQ16760 1214 aa18.38■□□□□ 0.53
SNED1-204ENST00000401884 SV2CQ496J9 727 aa18.38■□□□□ 0.53
SNED1-204ENST00000401884 ERMARDQ5T6L9 678 aa18.38■□□□□ 0.53
SNED1-204ENST00000401884 PRPF39Q86UA1 669 aaKnown RBP18.38■□□□□ 0.53
SNED1-204ENST00000401884 FAM131BQ86XD5 332 aa18.38■□□□□ 0.53
SNED1-204ENST00000401884 KATNAL2Q8IYT4 538 aa18.38■□□□□ 0.53
SNED1-204ENST00000401884 TRIM62Q9BVG3 475 aa18.38■□□□□ 0.53
SNED1-204ENST00000401884 PORCNQ9H237 461 aa18.38■□□□□ 0.53
SNED1-204ENST00000401884 TASP1Q9H6P5 420 aa18.38■□□□□ 0.53
SNED1-204ENST00000401884 C20orf96Q9NUD7 363 aaPredicted RBP18.38■□□□□ 0.53
SNED1-204ENST00000401884 ASTN2O75129 1339 aaPredicted RBP18.38■□□□□ 0.53
SNED1-204ENST00000401884 ZNF189O75820 626 aaPredicted RBP18.38■□□□□ 0.53
SNED1-204ENST00000401884 C6orf222P0C671 652 aaPredicted RBP18.38■□□□□ 0.53
SNED1-204ENST00000401884 FLT3P36888 993 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms