RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 CCNB1P14635 433 aa17.53■□□□□ 0.4
SIPA1-201ENST00000394224 YARSP54577 528 aaKnown RBP17.53■□□□□ 0.4
SIPA1-201ENST00000394224 AQP5P55064 265 aa17.53■□□□□ 0.4
SIPA1-201ENST00000394224 SNRNP48Q6IEG0 339 aaKnown RBP17.53■□□□□ 0.4
SIPA1-201ENST00000394224 RGS9BPQ6ZS82 235 aa17.53■□□□□ 0.4
SIPA1-201ENST00000394224 SPNS2Q8IVW8 549 aa17.53■□□□□ 0.4
SIPA1-201ENST00000394224 SLC26A7Q8TE54 656 aa17.53■□□□□ 0.4
SIPA1-201ENST00000394224 TRAPPC12Q8WVT3 735 aa17.53■□□□□ 0.4
SIPA1-201ENST00000394224 EBF4Q9BQW3 602 aa17.53■□□□□ 0.4
SIPA1-201ENST00000394224 IDI2Q9BXS1 227 aa17.53■□□□□ 0.4
SIPA1-201ENST00000394224 TRIM4Q9C037 500 aa17.53■□□□□ 0.4
SIPA1-201ENST00000394224 RNF146Q9NTX7 359 aa17.53■□□□□ 0.4
SIPA1-201ENST00000394224 LUC7L3O95232 432 aaKnown RBP17.53■□□□□ 0.4
SIPA1-201ENST00000394224 NR3C2P08235 984 aa17.53■□□□□ 0.4
SIPA1-201ENST00000394224 KRT3P12035 628 aa17.53■□□□□ 0.4
SIPA1-201ENST00000394224 NCF2P19878 526 aaPredicted RBP17.53■□□□□ 0.4
SIPA1-201ENST00000394224 HOXA7P31268 230 aaPredicted RBP17.53■□□□□ 0.4
SIPA1-201ENST00000394224 MAN1A1P33908 653 aa17.53■□□□□ 0.4
SIPA1-201ENST00000394224 SERPINB6P35237 376 aa17.53■□□□□ 0.4
SIPA1-201ENST00000394224 MAP4K3Q8IVH8 894 aa17.53■□□□□ 0.4
SIPA1-201ENST00000394224 C12orf50Q8NA57 414 aaPredicted RBP17.53■□□□□ 0.4
SIPA1-201ENST00000394224 CPT1BQ92523 772 aa17.53■□□□□ 0.4
SIPA1-201ENST00000394224 GBP5Q96PP8 586 aa17.53■□□□□ 0.4
SIPA1-201ENST00000394224 KANSL3Q9P2N6 904 aa17.53■□□□□ 0.4
SIPA1-201ENST00000394224 SCOCQ9UIL1 159 aa17.53■□□□□ 0.4
SIPA1-201ENST00000394224 GSC2O15499 205 aa17.52■□□□□ 0.4
SIPA1-201ENST00000394224 CACNA2D1P54289 1103 aa17.52■□□□□ 0.4
SIPA1-201ENST00000394224 MKRN3Q13064 507 aaKnown RBP17.52■□□□□ 0.4
SIPA1-201ENST00000394224 VPS72Q15906 364 aa17.52■□□□□ 0.4
SIPA1-201ENST00000394224 XPNPEP1Q9NQW7 623 aa17.52■□□□□ 0.4
SIPA1-201ENST00000394224 STOML1Q9UBI4 398 aa17.52■□□□□ 0.4
SIPA1-201ENST00000394224 RABGEF1Q9UJ41 708 aa17.52■□□□□ 0.4
SIPA1-201ENST00000394224 EDN1P05305 212 aa17.52■□□□□ 0.4
SIPA1-201ENST00000394224 MMP14P50281 582 aa17.52■□□□□ 0.4
SIPA1-201ENST00000394224 CDH6P55285 790 aa17.52■□□□□ 0.4
SIPA1-201ENST00000394224 TFDP3Q5H9I0 405 aa17.52■□□□□ 0.4
SIPA1-201ENST00000394224 TCHHL1Q5QJ38 904 aaPredicted RBP17.52■□□□□ 0.4
SIPA1-201ENST00000394224 DENND1BQ6P3S1 775 aa17.52■□□□□ 0.4
SIPA1-201ENST00000394224 TAS1R3Q7RTX0 852 aa17.52■□□□□ 0.4
SIPA1-201ENST00000394224 ASAP3Q8TDY4 903 aa17.52■□□□□ 0.4
SIPA1-201ENST00000394224 MORC4Q8TE76 937 aa17.52■□□□□ 0.4
SIPA1-201ENST00000394224 PDCD2LQ9BRP1 358 aa17.52■□□□□ 0.4
SIPA1-201ENST00000394224 STRA6Q9BX79 667 aa17.52■□□□□ 0.4
SIPA1-201ENST00000394224 MYO18AQ92614 2054 aaKnown RBP17.52■□□□□ 0.39
SIPA1-201ENST00000394224 CXorf49A8MYA2 514 aaPredicted RBP17.52■□□□□ 0.39
SIPA1-201ENST00000394224 KCNN4O15554 427 aa17.52■□□□□ 0.39
SIPA1-201ENST00000394224 APBA3O96018 575 aa17.52■□□□□ 0.39
SIPA1-201ENST00000394224 ALADP13716 330 aa17.52■□□□□ 0.39
SIPA1-201ENST00000394224 KCNA4P22459 653 aa17.52■□□□□ 0.39
SIPA1-201ENST00000394224 VCPP55072 806 aaKnown RBP17.52■□□□□ 0.39
SIPA1-201ENST00000394224 HADHBP55084 474 aaKnown RBP17.52■□□□□ 0.39
SIPA1-201ENST00000394224 CAV1Q03135 178 aa17.52■□□□□ 0.39
SIPA1-201ENST00000394224 VWA5B1Q5TIE3 1220 aa17.52■□□□□ 0.39
SIPA1-201ENST00000394224 LRRC74BQ6ZQY2 392 aa17.52■□□□□ 0.39
SIPA1-201ENST00000394224 KBTBD2Q8IY47 623 aa17.52■□□□□ 0.39
SIPA1-201ENST00000394224 ALLCQ8N6M5 410 aa17.52■□□□□ 0.39
SIPA1-201ENST00000394224 EXD1Q8NHP7 514 aa17.52■□□□□ 0.39
SIPA1-201ENST00000394224 CCDC110Q8TBZ0 833 aa17.52■□□□□ 0.39
SIPA1-201ENST00000394224 NSL1Q96IY1 281 aa17.52■□□□□ 0.39
SIPA1-201ENST00000394224 IWS1Q96ST2 819 aa17.52■□□□□ 0.39
SIPA1-201ENST00000394224 RPAP3Q9H6T3 665 aaPredicted RBP17.52■□□□□ 0.39
SIPA1-201ENST00000394224 MAN1C1Q9NR34 630 aa17.52■□□□□ 0.39
SIPA1-201ENST00000394224 INO80B-WBP1J3KQ70 363 aa17.51■□□□□ 0.39
SIPA1-201ENST00000394224 CCDC22O60826 627 aa17.51■□□□□ 0.39
SIPA1-201ENST00000394224 SLC1A1P43005 524 aa17.51■□□□□ 0.39
SIPA1-201ENST00000394224 BTKQ06187 659 aa17.51■□□□□ 0.39
SIPA1-201ENST00000394224 ATP11CQ8NB49 1132 aa17.51■□□□□ 0.39
SIPA1-201ENST00000394224 BBOF1Q8ND07 529 aa17.51■□□□□ 0.39
SIPA1-201ENST00000394224 GSTCDQ8NEC7 633 aa17.51■□□□□ 0.39
SIPA1-201ENST00000394224 TTC16Q8NEE8 873 aa17.51■□□□□ 0.39
SIPA1-201ENST00000394224 GRAMD1AQ96CP6 724 aa17.51■□□□□ 0.39
SIPA1-201ENST00000394224 PGBD4Q96DM1 585 aa17.51■□□□□ 0.39
SIPA1-201ENST00000394224 INO80BQ9C086 356 aaPredicted RBP17.51■□□□□ 0.39
SIPA1-201ENST00000394224 RANBP17Q9H2T7 1088 aaKnown RBP17.51■□□□□ 0.39
SIPA1-201ENST00000394224 CISHQ9NSE2 258 aa17.51■□□□□ 0.39
SIPA1-201ENST00000394224 IP6K2Q9UHH9 426 aa17.51■□□□□ 0.39
SIPA1-201ENST00000394224 MAPTP10636 758 aaKnown RBP17.51■□□□□ 0.39
SIPA1-201ENST00000394224 SP100P23497 879 aaPredicted RBP17.51■□□□□ 0.39
SIPA1-201ENST00000394224 GRIA1P42261 906 aa17.51■□□□□ 0.39
SIPA1-201ENST00000394224 PAPOLAP51003 745 aaKnown RBP17.51■□□□□ 0.39
SIPA1-201ENST00000394224 CENPCQ03188 943 aa17.51■□□□□ 0.39
SIPA1-201ENST00000394224 LPCAT4Q643R3 524 aa17.51■□□□□ 0.39
SIPA1-201ENST00000394224 KIAA0319LQ8IZA0 1049 aa17.51■□□□□ 0.39
SIPA1-201ENST00000394224 BTBD10Q9BSF8 475 aa17.51■□□□□ 0.39
SIPA1-201ENST00000394224 PDGFDQ9GZP0 370 aaPredicted RBP17.51■□□□□ 0.39
SIPA1-201ENST00000394224 MIS12Q9H081 205 aa17.51■□□□□ 0.39
SIPA1-201ENST00000394224 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.51■□□□□ 0.39
SIPA1-201ENST00000394224 SEPT10Q9P0V9 454 aa17.51■□□□□ 0.39
SIPA1-201ENST00000394224 ZNF536O15090 1300 aa17.51■□□□□ 0.39
SIPA1-201ENST00000394224 MAP3K7O43318 606 aa17.51■□□□□ 0.39
SIPA1-201ENST00000394224 GNAZP19086 355 aa17.51■□□□□ 0.39
SIPA1-201ENST00000394224 PHBP35232 272 aa17.51■□□□□ 0.39
SIPA1-201ENST00000394224 RNASEH2BQ5TBB1 312 aaKnown RBP17.51■□□□□ 0.39
SIPA1-201ENST00000394224 TREML1Q86YW5 311 aa17.51■□□□□ 0.39
SIPA1-201ENST00000394224 DENND1AQ8TEH3 1009 aa17.51■□□□□ 0.39
SIPA1-201ENST00000394224 SLC4A7Q9Y6M7 1214 aa17.51■□□□□ 0.39
SIPA1-201ENST00000394224 TCRBV9S1A1TA0A576 114 aa17.5■□□□□ 0.39
SIPA1-201ENST00000394224 P4HA2O15460 535 aa17.5■□□□□ 0.39
SIPA1-201ENST00000394224 DGKIO75912 1065 aa17.5■□□□□ 0.39
SIPA1-201ENST00000394224 HMGCS2P54868 508 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms