RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 PALM2Q8IXS6 379 aa3.72□□□□□ -1.81
PTPRC-205ENST00000391970 CACNA2D3Q8IZS8 1091 aa3.72□□□□□ -1.81
PTPRC-205ENST00000391970 FAM9AQ8IZU1 332 aaPredicted RBP3.72□□□□□ -1.81
PTPRC-205ENST00000391970 FAM109AQ8N4B1 249 aa3.72□□□□□ -1.81
PTPRC-205ENST00000391970 CCDC150Q8NCX0 1101 aa3.72□□□□□ -1.81
PTPRC-205ENST00000391970 SNX19Q92543 992 aa3.72□□□□□ -1.81
PTPRC-205ENST00000391970 FUBP1Q96AE4 644 aaKnown RBP3.72□□□□□ -1.81
PTPRC-205ENST00000391970 RNF31Q96EP0 1072 aa3.72□□□□□ -1.81
PTPRC-205ENST00000391970 SNX27Q96L92 541 aa3.72□□□□□ -1.81
PTPRC-205ENST00000391970 OSBPL9Q96SU4 736 aa3.72□□□□□ -1.81
PTPRC-205ENST00000391970 RMDN3Q96TC7 470 aa3.72□□□□□ -1.81
PTPRC-205ENST00000391970 ADAM2Q99965 735 aa3.72□□□□□ -1.81
PTPRC-205ENST00000391970 ALOXE3Q9BYJ1 711 aa3.72□□□□□ -1.81
PTPRC-205ENST00000391970 KRTAP3-1Q9BYR8 98 aa3.72□□□□□ -1.81
PTPRC-205ENST00000391970 FAM83DQ9H4H8 585 aa3.72□□□□□ -1.81
PTPRC-205ENST00000391970 GALNT9Q9HCQ5 603 aa3.72□□□□□ -1.81
PTPRC-205ENST00000391970 DKK2Q9UBU2 259 aa3.72□□□□□ -1.81
PTPRC-205ENST00000391970 NDRG4Q9ULP0 352 aaKnown RBP3.72□□□□□ -1.81
PTPRC-205ENST00000391970 MRPS17Q9Y2R5 130 aaKnown RBP3.72□□□□□ -1.81
PTPRC-205ENST00000391970 NOX1Q9Y5S8 564 aa3.72□□□□□ -1.81
PTPRC-205ENST00000391970 MORC2Q9Y6X9 1032 aaPredicted RBP3.72□□□□□ -1.81
PTPRC-205ENST00000391970 A0A0B4J269 797 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 hCG_1642624A0A1W2PR95 340 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 LGALS16A8MUM7 142 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 SYT5O00445 386 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 NPC1O15118 1278 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 PLSCR1O15162 318 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 TRIAP1O43715 76 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 SRGAP2O75044 1071 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 PIAS2O75928 621 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 CDKL5O76039 1030 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 CSF1RP07333 972 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 IDEP14735 1019 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 EGR1P18146 543 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 DDX6P26196 483 aaKnown RBP eCLIP3.71□□□□□ -1.82
PTPRC-205ENST00000391970 CD6P30203 668 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 BMPR1AP36894 532 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 ITGA8P53708 1063 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 PRKAG1P54619 331 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 CTSWP56202 376 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 FPGSQ05932 587 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 FSTL1Q12841 308 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 RESTQ13127 1097 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 GRM1Q13255 1194 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 TUBB3Q13509 450 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 KCNAB1Q14722 419 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 CDSNQ15517 529 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 PFKFB4Q16877 469 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 TMEM95Q3KNT9 176 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 USP39Q53GS9 565 aaKnown RBP3.71□□□□□ -1.82
PTPRC-205ENST00000391970 PRR16Q569H4 304 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 SPDYAQ5MJ70 313 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 ARHGAP40Q5TG30 622 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 VPS53Q5VIR6 699 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 SFRP4Q6FHJ7 346 aaPredicted RBP3.71□□□□□ -1.82
PTPRC-205ENST00000391970 RGS7BPQ6MZT1 257 aaPredicted RBP3.71□□□□□ -1.82
PTPRC-205ENST00000391970 GGT6Q6P531 493 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 KRT73Q86Y46 540 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 C1orf210Q8IVY1 113 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 COLGALT2Q8IYK4 626 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 ZNF276Q8N554 614 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.71□□□□□ -1.82
PTPRC-205ENST00000391970 CPEB3Q8NE35 698 aaKnown RBP3.71□□□□□ -1.82
PTPRC-205ENST00000391970 MYRIPQ8NFW9 859 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 IPO4Q8TEX9 1081 aaKnown RBP3.71□□□□□ -1.82
PTPRC-205ENST00000391970 EXTL1Q92935 676 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 DVL3Q92997 716 aaPredicted RBP3.71□□□□□ -1.82
PTPRC-205ENST00000391970 MYEOVQ96EZ4 313 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 CDK5RAP1Q96SZ6 601 aaKnown RBP3.71□□□□□ -1.82
PTPRC-205ENST00000391970 NELL2Q99435 816 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 C1QTNF3Q9BXJ4 246 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.71□□□□□ -1.82
PTPRC-205ENST00000391970 UNKLQ9H9P5 680 aaKnown RBP3.71□□□□□ -1.82
PTPRC-205ENST00000391970 AGO4Q9HCK5 861 aaKnown RBP3.71□□□□□ -1.82
PTPRC-205ENST00000391970 OBP2BQ9NPH6 170 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 INTS13Q9NVM9 706 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 PARPBPQ9NWS1 579 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 IGSF9Q9P2J2 1179 aa3.71□□□□□ -1.82
PTPRC-205ENST00000391970 TMEM200CA6NKL6 621 aa3.7□□□□□ -1.82
PTPRC-205ENST00000391970 AQP12BA6NM10 295 aa3.7□□□□□ -1.82
PTPRC-205ENST00000391970 F5H697 171 aa3.7□□□□□ -1.82
PTPRC-205ENST00000391970 CD3EAPO15446 510 aaKnown RBP3.7□□□□□ -1.82
PTPRC-205ENST00000391970 RASAL1O95294 804 aa3.7□□□□□ -1.82
PTPRC-205ENST00000391970 NDUFA10O95299 355 aa3.7□□□□□ -1.82
PTPRC-205ENST00000391970 GATA3P23771 443 aa3.7□□□□□ -1.82
PTPRC-205ENST00000391970 MST1P26927 711 aa3.7□□□□□ -1.82
PTPRC-205ENST00000391970 ATICP31939 592 aa3.7□□□□□ -1.82
PTPRC-205ENST00000391970 MAGEA10P43363 369 aaPredicted RBP3.7□□□□□ -1.82
PTPRC-205ENST00000391970 RAPGEF1Q13905 1077 aa3.7□□□□□ -1.82
PTPRC-205ENST00000391970 E2F2Q14209 437 aa3.7□□□□□ -1.82
PTPRC-205ENST00000391970 SPARCL1Q14515 664 aa3.7□□□□□ -1.82
PTPRC-205ENST00000391970 MAPKAPK3Q16644 382 aa3.7□□□□□ -1.82
PTPRC-205ENST00000391970 SLC5A9Q2M3M2 681 aa3.7□□□□□ -1.82
PTPRC-205ENST00000391970 PTCHD3Q3KNS1 767 aa3.7□□□□□ -1.82
PTPRC-205ENST00000391970 FBLN7Q53RD9 439 aa3.7□□□□□ -1.82
PTPRC-205ENST00000391970 CERCAMQ5T4B2 595 aa3.7□□□□□ -1.82
PTPRC-205ENST00000391970 MANEALQ5VSG8 457 aa3.7□□□□□ -1.82
PTPRC-205ENST00000391970 ICE2Q659A1 982 aa3.7□□□□□ -1.82
PTPRC-205ENST00000391970 ARL6IP4Q66PJ3 421 aaKnown RBP3.7□□□□□ -1.82
PTPRC-205ENST00000391970 RAP1GAP2Q684P5 730 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms