RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 RDM1Q8NG50 284 aa17.75■□□□□ 0.43
SNAPC3-202ENST00000380821 SLC7A14Q8TBB6 771 aa17.75■□□□□ 0.43
SNAPC3-202ENST00000380821 CDC42EP4Q9H3Q1 356 aaKnown RBP17.75■□□□□ 0.43
SNAPC3-202ENST00000380821 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.75■□□□□ 0.43
SNAPC3-202ENST00000380821 DDX20Q9UHI6 824 aaKnown RBP17.75■□□□□ 0.43
SNAPC3-202ENST00000380821 PPP3CCP48454 512 aa17.75■□□□□ 0.43
SNAPC3-202ENST00000380821 PDK2Q15119 407 aa17.75■□□□□ 0.43
SNAPC3-202ENST00000380821 TRIP4Q15650 581 aaPredicted RBP17.75■□□□□ 0.43
SNAPC3-202ENST00000380821 CACHD1Q5VU97 1274 aa17.75■□□□□ 0.43
SNAPC3-202ENST00000380821 LRRC6Q86X45 466 aa17.75■□□□□ 0.43
SNAPC3-202ENST00000380821 MAML3Q96JK9 1138 aa17.75■□□□□ 0.43
SNAPC3-202ENST00000380821 HPSEQ9Y251 543 aa17.75■□□□□ 0.43
SNAPC3-202ENST00000380821 RNF17Q9BXT8 1623 aaKnown RBP17.75■□□□□ 0.43
SNAPC3-202ENST00000380821 KRT87PA6NCN2 255 aa17.75■□□□□ 0.43
SNAPC3-202ENST00000380821 TIMM44O43615 452 aa17.75■□□□□ 0.43
SNAPC3-202ENST00000380821 PTRHD1Q6GMV3 140 aaKnown RBP17.75■□□□□ 0.43
SNAPC3-202ENST00000380821 RMI1Q9H9A7 625 aa17.75■□□□□ 0.43
SNAPC3-202ENST00000380821 AGPAT3Q9NRZ7 376 aa17.75■□□□□ 0.43
SNAPC3-202ENST00000380821 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.75■□□□□ 0.43
SNAPC3-202ENST00000380821 CAPN6Q9Y6Q1 641 aa17.75■□□□□ 0.43
SNAPC3-202ENST00000380821 TOMM70O94826 608 aa17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 GEMP55040 296 aa17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 RASA2Q15283 850 aa17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 TRIM65Q6PJ69 517 aa17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 MTDHQ86UE4 582 aaKnown RBP17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 CENPLQ8N0S6 344 aaPredicted RBP17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 ATXN2LQ8WWM7 1075 aaKnown RBP17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 SNUPNO95149 360 aaKnown RBP17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 PRKCEQ02156 737 aa17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 CYP4A22Q5TCH4 519 aa17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 PAFAH2Q99487 392 aa17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 RMND5AQ9H871 391 aa17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 C17orf75Q9HAS0 396 aa17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 LATS2Q9NRM7 1088 aa17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 SLC38A7Q9NVC3 462 aa17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 ZNF839A8K0R7 811 aa17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 TFDP3Q5H9I0 405 aa17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 PABPC5Q96DU9 382 aaKnown RBP17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 DAGLAQ9Y4D2 1042 aa17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 VWA5AO00534 786 aa17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 MAGEB2O15479 319 aa17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 CSPG5O95196 566 aa17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 ZCCHC18P0CG32 403 aa17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 ZNF23P17027 643 aa17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 PEX5P50542 639 aa17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 CACNB2Q08289 660 aaPredicted RBP17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 OASLQ15646 514 aaKnown RBP17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 UBOX5O94941 541 aa17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 GRB10Q13322 594 aa17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 PDPK2PQ6A1A2 396 aa17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 XRRA1Q6P2D8 792 aa17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 RIN3Q8TB24 985 aa17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 DIS3LQ8TF46 1054 aaKnown RBP17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 RSPH1Q8WYR4 309 aa17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 GLMNQ92990 594 aa17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 UBE2OQ9C0C9 1292 aaKnown RBP17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 PIM2Q9P1W9 311 aa17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 V9GYQ6 96 aa17.74■□□□□ 0.43
SNAPC3-202ENST00000380821 A0A087X0T9 212 aa17.73■□□□□ 0.43
SNAPC3-202ENST00000380821 SNTNA6NMZ2 147 aa17.73■□□□□ 0.43
SNAPC3-202ENST00000380821 MAFGO15525 162 aa17.73■□□□□ 0.43
SNAPC3-202ENST00000380821 ZC3H11AO75152 810 aaKnown RBP eCLIP17.73■□□□□ 0.43
SNAPC3-202ENST00000380821 GRAP2O75791 330 aa17.73■□□□□ 0.43
SNAPC3-202ENST00000380821 FAM228BP0C875 321 aa17.73■□□□□ 0.43
SNAPC3-202ENST00000380821 GRK2P25098 689 aa17.73■□□□□ 0.43
SNAPC3-202ENST00000380821 AKT1P31749 480 aa17.73■□□□□ 0.43
SNAPC3-202ENST00000380821 JMJD4Q9H9V9 463 aa17.73■□□□□ 0.43
SNAPC3-202ENST00000380821 TBX20Q9UMR3 447 aa17.73■□□□□ 0.43
SNAPC3-202ENST00000380821 SGPL1O95470 568 aa17.73■□□□□ 0.43
SNAPC3-202ENST00000380821 ATP5BP06576 529 aaKnown RBP17.73■□□□□ 0.43
SNAPC3-202ENST00000380821 AQP5P55064 265 aa17.73■□□□□ 0.43
SNAPC3-202ENST00000380821 SEL1L3Q68CR1 1132 aa17.73■□□□□ 0.43
SNAPC3-202ENST00000380821 FUCA2Q9BTY2 467 aa17.73■□□□□ 0.43
SNAPC3-202ENST00000380821 SNX13Q9Y5W8 968 aa17.73■□□□□ 0.43
SNAPC3-202ENST00000380821 CSF1RP07333 972 aa17.73■□□□□ 0.43
SNAPC3-202ENST00000380821 TXNP10599 105 aaKnown RBP17.73■□□□□ 0.43
SNAPC3-202ENST00000380821 RASA1P20936 1047 aa17.73■□□□□ 0.43
SNAPC3-202ENST00000380821 TGM2P21980 687 aa17.73■□□□□ 0.43
SNAPC3-202ENST00000380821 ATP8B4Q8TF62 1192 aa17.73■□□□□ 0.43
SNAPC3-202ENST00000380821 SIKE1Q9BRV8 207 aa17.73■□□□□ 0.43
SNAPC3-202ENST00000380821 F8VZ95 297 aa17.73■□□□□ 0.43
SNAPC3-202ENST00000380821 NDUFB10O96000 172 aa17.73■□□□□ 0.43
SNAPC3-202ENST00000380821 SOX11P35716 441 aa17.73■□□□□ 0.43
SNAPC3-202ENST00000380821 TRAPPC9Q96Q05 1148 aa17.73■□□□□ 0.43
SNAPC3-202ENST00000380821 SENP2Q9HC62 589 aa17.73■□□□□ 0.43
SNAPC3-202ENST00000380821 CNGB3Q9NQW8 809 aa17.73■□□□□ 0.43
SNAPC3-202ENST00000380821 RUVBL2Q9Y230 463 aaKnown RBP17.73■□□□□ 0.43
SNAPC3-202ENST00000380821 DNAJC16Q9Y2G8 782 aa17.73■□□□□ 0.43
SNAPC3-202ENST00000380821 IQSEC2Q5JU85 1478 aa17.73■□□□□ 0.43
SNAPC3-202ENST00000380821 SDR42E2A6NKP2 422 aa17.72■□□□□ 0.43
SNAPC3-202ENST00000380821 FAM58BPP0C7Q3 252 aa17.72■□□□□ 0.43
SNAPC3-202ENST00000380821 MAPK1P28482 360 aa17.72■□□□□ 0.43
SNAPC3-202ENST00000380821 GNL1P36915 607 aaPredicted RBP17.72■□□□□ 0.43
SNAPC3-202ENST00000380821 CACNA2D1P54289 1103 aa17.72■□□□□ 0.43
SNAPC3-202ENST00000380821 CHRNB3Q05901 458 aa17.72■□□□□ 0.43
SNAPC3-202ENST00000380821 MCL1Q07820 350 aa17.72■□□□□ 0.43
SNAPC3-202ENST00000380821 IL31Q6EBC2 164 aa17.72■□□□□ 0.43
SNAPC3-202ENST00000380821 C11orf63Q6NUN7 778 aa17.72■□□□□ 0.43
SNAPC3-202ENST00000380821 UBA3Q8TBC4 463 aa17.72■□□□□ 0.43
SNAPC3-202ENST00000380821 SEPT1Q8WYJ6 367 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms