RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 CMA1P23946 247 aa15.21■□□□□ 0.03
NELFE-201ENST00000375425 GRIK1P39086 918 aa15.21■□□□□ 0.03
NELFE-201ENST00000375425 SATB1Q01826 763 aa15.21■□□□□ 0.03
NELFE-201ENST00000375425 CYP27A1Q02318 531 aa15.21■□□□□ 0.03
NELFE-201ENST00000375425 TRPC3Q13507 836 aa15.21■□□□□ 0.03
NELFE-201ENST00000375425 RUNX3Q13761 415 aa15.21■□□□□ 0.03
NELFE-201ENST00000375425 CCINQ13939 588 aa15.21■□□□□ 0.03
NELFE-201ENST00000375425 Q6ZS52 159 aa15.21■□□□□ 0.03
NELFE-201ENST00000375425 OR6B3Q8NGW1 331 aa15.21■□□□□ 0.03
NELFE-201ENST00000375425 PCED1BQ96HM7 432 aa15.21■□□□□ 0.03
NELFE-201ENST00000375425 CHAMP1Q96JM3 812 aa15.21■□□□□ 0.03
NELFE-201ENST00000375425 SLC22A12Q96S37 553 aa15.21■□□□□ 0.03
NELFE-201ENST00000375425 MRPL45Q9BRJ2 306 aaKnown RBP15.21■□□□□ 0.03
NELFE-201ENST00000375425 EPC1Q9H2F5 836 aa15.21■□□□□ 0.03
NELFE-201ENST00000375425 KIF9Q9HAQ2 790 aa15.21■□□□□ 0.03
NELFE-201ENST00000375425 HPS4Q9NQG7 708 aa15.21■□□□□ 0.03
NELFE-201ENST00000375425 FAM163BP0C2L3 166 aa15.2■□□□□ 0.02
NELFE-201ENST00000375425 PFKFB1P16118 471 aa15.2■□□□□ 0.02
NELFE-201ENST00000375425 CASP4P49662 377 aa15.2■□□□□ 0.02
NELFE-201ENST00000375425 MYL6P60660 151 aa15.2■□□□□ 0.02
NELFE-201ENST00000375425 TNNC1P63316 161 aa15.2■□□□□ 0.02
NELFE-201ENST00000375425 PSMD2Q13200 908 aa15.2■□□□□ 0.02
NELFE-201ENST00000375425 ZNF268Q14587 947 aaPredicted RBP15.2■□□□□ 0.02
NELFE-201ENST00000375425 KMT5BQ4FZB7 885 aa15.2■□□□□ 0.02
NELFE-201ENST00000375425 CC2D1AQ6P1N0 951 aaPredicted RBP15.2■□□□□ 0.02
NELFE-201ENST00000375425 FSIP1Q8NA03 581 aa15.2■□□□□ 0.02
NELFE-201ENST00000375425 GOLGA5Q8TBA6 731 aa15.2■□□□□ 0.02
NELFE-201ENST00000375425 MYCBPAPQ8TBZ2 947 aa15.2■□□□□ 0.02
NELFE-201ENST00000375425 PLEKHO2Q8TD55 490 aa15.2■□□□□ 0.02
NELFE-201ENST00000375425 SPATA17Q96L03 361 aa15.2■□□□□ 0.02
NELFE-201ENST00000375425 SPATA32Q96LK8 384 aa15.2■□□□□ 0.02
NELFE-201ENST00000375425 EXOC1Q9NV70 894 aa15.2■□□□□ 0.02
NELFE-201ENST00000375425 NXF1Q9UBU9 619 aaKnown RBP15.2■□□□□ 0.02
NELFE-201ENST00000375425 ZDHHC9Q9Y397 364 aa15.2■□□□□ 0.02
NELFE-201ENST00000375425 NME7Q9Y5B8 376 aa15.2■□□□□ 0.02
NELFE-201ENST00000375425 OTOGLQ3ZCN5 2332 aa15.2■□□□□ 0.02
NELFE-201ENST00000375425 FANCMQ8IYD8 2048 aa15.2■□□□□ 0.02
NELFE-201ENST00000375425 PATJQ8NI35 1801 aa15.2■□□□□ 0.02
NELFE-201ENST00000375425 TRAV19A0A0A6YYK7 116 aa15.19■□□□□ 0.02
NELFE-201ENST00000375425 PTPN1P18031 435 aaKnown RBP15.19■□□□□ 0.02
NELFE-201ENST00000375425 ATICP31939 592 aa15.19■□□□□ 0.02
NELFE-201ENST00000375425 FAM160A1Q05DH4 1040 aa15.19■□□□□ 0.02
NELFE-201ENST00000375425 MDH1BQ5I0G3 518 aa15.19■□□□□ 0.02
NELFE-201ENST00000375425 DENND5BQ6ZUT9 1274 aa15.19■□□□□ 0.02
NELFE-201ENST00000375425 SYNPOQ8N3V7 929 aa15.19■□□□□ 0.02
NELFE-201ENST00000375425 ARL14EPQ8N8R7 260 aaPredicted RBP15.19■□□□□ 0.02
NELFE-201ENST00000375425 KIAA0895Q8NCT3 520 aa15.19■□□□□ 0.02
NELFE-201ENST00000375425 TTC16Q8NEE8 873 aa15.19■□□□□ 0.02
NELFE-201ENST00000375425 XYLT2Q9H1B5 865 aa15.19■□□□□ 0.02
NELFE-201ENST00000375425 DMAC2Q9NW81 257 aa15.19■□□□□ 0.02
NELFE-201ENST00000375425 C2orf42Q9NWW7 574 aa15.19■□□□□ 0.02
NELFE-201ENST00000375425 NCDNQ9UBB6 729 aa15.19■□□□□ 0.02
NELFE-201ENST00000375425 SMG5Q9UPR3 1016 aaKnown RBP15.19■□□□□ 0.02
NELFE-201ENST00000375425 C2orf78A6NCI8 922 aa15.18■□□□□ 0.02
NELFE-201ENST00000375425 A8MXQ7 604 aa15.18■□□□□ 0.02
NELFE-201ENST00000375425 PHACTR2O75167 634 aa15.18■□□□□ 0.02
NELFE-201ENST00000375425 STAU1O95793 577 aaKnown RBP15.18■□□□□ 0.02
NELFE-201ENST00000375425 CKMP06732 381 aa15.18■□□□□ 0.02
NELFE-201ENST00000375425 USP17L7P0C7H9 530 aa15.18■□□□□ 0.02
NELFE-201ENST00000375425 ARSAP15289 507 aa15.18■□□□□ 0.02
NELFE-201ENST00000375425 HDCP19113 662 aa15.18■□□□□ 0.02
NELFE-201ENST00000375425 USP46P62068 366 aa15.18■□□□□ 0.02
NELFE-201ENST00000375425 DMWDQ09019 674 aa15.18■□□□□ 0.02
NELFE-201ENST00000375425 TDRD10Q5VZ19 366 aaKnown RBP15.18■□□□□ 0.02
NELFE-201ENST00000375425 PARD3BQ8TEW8 1205 aa15.18■□□□□ 0.02
NELFE-201ENST00000375425 SYAP1Q96A49 352 aaPredicted RBP15.18■□□□□ 0.02
NELFE-201ENST00000375425 CHFRQ96EP1 664 aa15.18■□□□□ 0.02
NELFE-201ENST00000375425 CEP295NLQ96MC4 621 aa15.18■□□□□ 0.02
NELFE-201ENST00000375425 KCTD10Q9H3F6 313 aa15.18■□□□□ 0.02
NELFE-201ENST00000375425 DPEP3Q9H4B8 488 aa15.18■□□□□ 0.02
NELFE-201ENST00000375425 GCNT4Q9P109 453 aa15.18■□□□□ 0.02
NELFE-201ENST00000375425 USP25Q9UHP3 1055 aa15.18■□□□□ 0.02
NELFE-201ENST00000375425 HPSEQ9Y251 543 aa15.18■□□□□ 0.02
NELFE-201ENST00000375425 NUP210Q8TEM1 1887 aaPredicted RBP15.18■□□□□ 0.02
NELFE-201ENST00000375425 LRRIQ3A6PVS8 624 aaPredicted RBP15.17■□□□□ 0.02
NELFE-201ENST00000375425 F8VP50 259 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 K7ESF4 209 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 TRDMT1O14717 391 aaKnown RBP15.17■□□□□ 0.02
NELFE-201ENST00000375425 TRIM66O15016 1216 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 PAPSS2O95340 614 aaPredicted RBP15.17■□□□□ 0.02
NELFE-201ENST00000375425 C4BPAP04003 597 aaKnown RBP15.17■□□□□ 0.02
NELFE-201ENST00000375425 MYL1P05976 194 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 ANXA13P27216 316 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 CDH8P55286 799 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 CLDN10P78369 228 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 KRT85P78386 507 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 AMPD2Q01433 879 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 GRSF1Q12849 480 aaKnown RBP eCLIP15.17■□□□□ 0.02
NELFE-201ENST00000375425 BIRC3Q13489 604 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 MTF1Q14872 753 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 PDGFRLQ15198 375 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 ZNF77Q15935 545 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 TMEM196Q5HYL7 178 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 SLC9A9Q8IVB4 645 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 TMEM174Q8WUU8 243 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 OSCP1Q8WVF1 389 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 SECISBP2LQ93073 1101 aaKnown RBP15.17■□□□□ 0.02
NELFE-201ENST00000375425 RMDN1Q96DB5 314 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 ECT2Q9H8V3 914 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 VRTNQ9H8Y1 702 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms