RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 Q4G0T1 1027 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 PCNX4Q63HM2 1172 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 SZRD1Q7Z422 152 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 BBS5Q8N3I7 341 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 RNF148Q8N7C7 305 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 FAM172AQ8WUF8 416 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 USP6NLQ92738 828 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 TMEM237Q96Q45 408 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 PLEKHA5Q9HAU0 1116 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 TMBIM4Q9HC24 238 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 DPP3Q9NY33 737 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 DDX56Q9NY93 547 aaKnown RBP9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 SNTG2Q9NY99 539 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 IPO11Q9UI26 975 aaKnown RBP9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 SCOCQ9UIL1 159 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 MOSPD1Q9UJG1 213 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 PACSIN3Q9UKS6 424 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 RAB21Q9UL25 225 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 NAALADL1Q9UQQ1 740 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 CASTOR2A6NHX0 329 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 ASB14A6NK59 587 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 IRF1P10914 325 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 GPD1P21695 349 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 BTKQ06187 659 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 LAMTOR4Q0VGL1 99 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 SEMA3FQ13275 785 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 IER5Q5VY09 327 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 ZCCHC23Q6ZST2 131 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 TAS2R42Q7RTR8 314 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 NUP93Q8N1F7 819 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 GALNT4Q8N4A0 578 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 ICA1LQ8NDH6 482 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 RNF217Q8TC41 542 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 IFT43Q96FT9 208 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 TRIM4Q9C037 500 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 CYP4F12Q9HCS2 524 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 KRT82Q9NSB4 513 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 OLA1Q9NTK5 396 aaKnown RBP9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 HEY2Q9UBP5 337 aa9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 DDX60Q8IY21 1712 aaKnown RBP9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 AFDNP55196 1824 aaKnown RBP9.5□□□□□ -0.89
SMARCA1-202ENST00000371122 FAM237AA0A1B0GTK4 181 aa9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 TCRBV7S2A1N4TA0A589 114 aa9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 PECAM1P16284 738 aaPredicted RBP9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 OR1G1P47890 313 aa9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 STX3Q13277 289 aa9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 AGBL3Q8NEM8 1001 aa9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 SEMA4DQ92854 862 aa9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 FAM163AQ96GL9 167 aaPredicted RBP9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 SEPT5Q99719 369 aaPredicted RBP9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 TASP1Q9H6P5 420 aa9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 DNAJC18Q9H819 358 aa9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 SP110Q9HB58 689 aa9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 C20orf96Q9NUD7 363 aaPredicted RBP9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 KCND2Q9NZV8 630 aa9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 PSMC3IPQ9P2W1 217 aaPredicted RBP9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 RPS6KL1Q9Y6S9 549 aa9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 CELF2O95319 508 aaKnown RBP9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 SYF2O95926 243 aaKnown RBP9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 GH1P01241 217 aa9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 HADHAP40939 763 aa9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 BIRC2Q13490 618 aa9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 SLC35G1Q2M3R5 365 aa9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 RAB44Q7Z6P3 723 aaPredicted RBP9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 MCOLN2Q8IZK6 566 aa9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 CXorf38Q8TB03 319 aa9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 EPS8L1Q8TE68 723 aa9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 SHISA4Q96DD7 197 aa9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 TRPV6Q9H1D0 765 aa9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 ARMCX1Q9P291 453 aa9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 BAG5Q9UL15 447 aa9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 AURKCQ9UQB9 309 aa9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 BRCA1P38398 1863 aaKnown RBP9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 DNAJC6O75061 913 aa9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 RPS6KA5O75582 802 aa9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 VIL1P09327 827 aaKnown RBP9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 CDK17Q00537 523 aa9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 SATB1Q01826 763 aa9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 TMC3Q7Z5M5 1100 aa9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 TNIP3Q96KP6 325 aa9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 KCNMB3Q9NPA1 279 aa9.49□□□□□ -0.89
SMARCA1-202ENST00000371122 RNF103-CHMP3A0A140T963 221 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 H3BRB1 525 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 EEF2KO00418 725 aaKnown RBP9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 B4GALT5O43286 388 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 HBP1O60381 514 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 MORF4L2Q15014 288 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 PKN2Q16513 984 aaKnown RBP9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 NPNTQ6UXI9 565 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 BZW1Q7L1Q6 419 aaKnown RBP9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 FASTKD5Q7L8L6 764 aaKnown RBP9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 C4orf19Q8IY42 314 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 THEM5Q8N1Q8 247 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 GMCL1P1Q8NEA9 526 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 GPRC5AQ8NFJ5 357 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 GPRASP2Q96D09 838 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 PGLYRP2Q96PD5 576 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 NCAPGQ9BPX3 1015 aa9.48□□□□□ -0.89
SMARCA1-202ENST00000371122 SPATC1LQ9H0A9 340 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms