RNA–Protein interactions for RNA: ENST00000361642.9

ZEB1-202, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZEB1, Length 5,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-202ENST00000361642 ABCB6Q9NP58 842 aa5.4□□□□□ -1.54
ZEB1-202ENST00000361642 DMAP1Q9NPF5 467 aaPredicted RBP5.4□□□□□ -1.54
ZEB1-202ENST00000361642 DNMT3LQ9UJW3 386 aa5.4□□□□□ -1.54
ZEB1-202ENST00000361642 IGHEP01854 428 aa5.4□□□□□ -1.54
ZEB1-202ENST00000361642 ATP5C1P36542 298 aaKnown RBP5.4□□□□□ -1.54
ZEB1-202ENST00000361642 MLLT6P55198 1093 aaPredicted RBP5.4□□□□□ -1.54
ZEB1-202ENST00000361642 PER3P56645 1201 aa5.4□□□□□ -1.54
ZEB1-202ENST00000361642 POLD3Q15054 466 aaPredicted RBP5.4□□□□□ -1.54
ZEB1-202ENST00000361642 KBTBD6Q86V97 674 aa5.4□□□□□ -1.54
ZEB1-202ENST00000361642 KIAA1958Q8N8K9 716 aa5.4□□□□□ -1.54
ZEB1-202ENST00000361642 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.4□□□□□ -1.542e-7■■■■■ 62.8
ZEB1-202ENST00000361642 FGD4Q96M96 766 aa5.4□□□□□ -1.54
ZEB1-202ENST00000361642 SYT15Q9BQS2 421 aa5.4□□□□□ -1.54
ZEB1-202ENST00000361642 CLSTN3Q9BQT9 956 aa5.4□□□□□ -1.54
ZEB1-202ENST00000361642 GDF3Q9NR23 364 aa5.4□□□□□ -1.54
ZEB1-202ENST00000361642 SNX9Q9Y5X1 595 aa5.4□□□□□ -1.54
ZEB1-202ENST00000361642 CLIC4Q9Y696 253 aa5.4□□□□□ -1.54
ZEB1-202ENST00000361642 RARRES1P49788 294 aa5.4□□□□□ -1.55
ZEB1-202ENST00000361642 FAM160A1Q05DH4 1040 aa5.4□□□□□ -1.55
ZEB1-202ENST00000361642 MGAT3Q09327 533 aa5.4□□□□□ -1.55
ZEB1-202ENST00000361642 ZNF252P-AS1Q0IIN9 211 aa5.4□□□□□ -1.55
ZEB1-202ENST00000361642 CCDC173Q0VFZ6 552 aa5.4□□□□□ -1.55
ZEB1-202ENST00000361642 SGSM1Q2NKQ1 1148 aa5.4□□□□□ -1.55
ZEB1-202ENST00000361642 TMEM119Q4V9L6 283 aa5.4□□□□□ -1.55
ZEB1-202ENST00000361642 MPPE1Q53F39 396 aa5.4□□□□□ -1.55
ZEB1-202ENST00000361642 ERAP2Q6P179 960 aa5.4□□□□□ -1.55
ZEB1-202ENST00000361642 INTS8Q75QN2 995 aaKnown RBP5.4□□□□□ -1.55
ZEB1-202ENST00000361642 RHBDD1Q8TEB9 315 aa5.4□□□□□ -1.55
ZEB1-202ENST00000361642 LPPQ93052 612 aa5.4□□□□□ -1.55
ZEB1-202ENST00000361642 NT5C1BQ96P26 610 aa5.4□□□□□ -1.55
ZEB1-202ENST00000361642 PCED1AQ9H1Q7 454 aa5.4□□□□□ -1.55
ZEB1-202ENST00000361642 NRDE2Q9H7Z3 1164 aa5.4□□□□□ -1.55
ZEB1-202ENST00000361642 MMRN2Q9H8L6 949 aa5.4□□□□□ -1.55
ZEB1-202ENST00000361642 FAM204AQ9H8W3 233 aa5.4□□□□□ -1.55
ZEB1-202ENST00000361642 YIPF1Q9Y548 306 aa5.4□□□□□ -1.55
ZEB1-202ENST00000361642 SYCE3A1L190 88 aa5.4□□□□□ -1.55
ZEB1-202ENST00000361642 HEPACAM2A8MVW5 462 aa5.4□□□□□ -1.55
ZEB1-202ENST00000361642 LARGE1O95461 756 aa5.4□□□□□ -1.55
ZEB1-202ENST00000361642 CTDNEP1O95476 244 aa5.4□□□□□ -1.55
ZEB1-202ENST00000361642 CCNE2O96020 404 aa5.4□□□□□ -1.55
ZEB1-202ENST00000361642 KRT9P35527 623 aa5.4□□□□□ -1.55
ZEB1-202ENST00000361642 SPDYCQ5MJ68 293 aa5.4□□□□□ -1.55
ZEB1-202ENST00000361642 RESP18Q5W5W9 173 aa5.4□□□□□ -1.55
ZEB1-202ENST00000361642 DENND5BQ6ZUT9 1274 aa5.4□□□□□ -1.55
ZEB1-202ENST00000361642 USP29Q9HBJ7 922 aa5.4□□□□□ -1.55
ZEB1-202ENST00000361642 RAD18Q9NS91 495 aa5.4□□□□□ -1.55
ZEB1-202ENST00000361642 C2CD2Q9Y426 696 aa5.4□□□□□ -1.55
ZEB1-202ENST00000361642 NUMBLQ9Y6R0 609 aa5.4□□□□□ -1.55
ZEB1-202ENST00000361642 COL11A1P12107 1806 aaPredicted RBP5.4□□□□□ -1.55
ZEB1-202ENST00000361642 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.39□□□□□ -1.55
ZEB1-202ENST00000361642 VIMP08670 466 aaKnown RBP5.39□□□□□ -1.55
ZEB1-202ENST00000361642 TNFRSF4P43489 277 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 ZNF177Q13360 481 aaPredicted RBP5.39□□□□□ -1.55
ZEB1-202ENST00000361642 GRM3Q14832 879 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 SETMARQ53H47 684 aaPredicted RBP5.39□□□□□ -1.55
ZEB1-202ENST00000361642 HYIQ5T013 277 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 NUGGCQ68CJ6 796 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 ANKS1BQ7Z6G8 1248 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 MRPL10Q7Z7H8 261 aaKnown RBP5.39□□□□□ -1.55
ZEB1-202ENST00000361642 TRIM48Q8IWZ4 208 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 OR6C4Q8NGE1 309 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.39□□□□□ -1.55
ZEB1-202ENST00000361642 GAB3Q8WWW8 586 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 ZCCHC14Q8WYQ9 949 aaKnown RBP5.39□□□□□ -1.55
ZEB1-202ENST00000361642 IQCDQ96DY2 449 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 C7orf25Q9BPX7 421 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 IRX2Q9BZI1 471 aaPredicted RBP5.39□□□□□ -1.55
ZEB1-202ENST00000361642 NXF1Q9UBU9 619 aaKnown RBP5.39□□□□□ -1.55
ZEB1-202ENST00000361642 MTMR6Q9Y217 621 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 PCDHA5Q9Y5H7 936 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 IRAK3Q9Y616 596 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 TAF6LQ9Y6J9 622 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 CCDC163A0A0D9SF12 145 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 A0A1B0GTW7 788 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 F5H5T6 163 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 SLC16A3O15427 465 aaKnown RBP5.39□□□□□ -1.55
ZEB1-202ENST00000361642 GPR32O75388 356 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 LRCH4O75427 683 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 MED24O75448 989 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 ADH5P11766 374 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 RUNX3Q13761 415 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 DMC1Q14565 340 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 C10orf76Q5T2E6 689 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 TTC39BQ5VTQ0 682 aaPredicted RBP5.39□□□□□ -1.55
ZEB1-202ENST00000361642 RINT1Q6NUQ1 792 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 HJURPQ8NCD3 748 aaPredicted RBP5.39□□□□□ -1.55
ZEB1-202ENST00000361642 HASPINQ8TF76 798 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 HMGB4Q8WW32 186 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 DHTKD1Q96HY7 919 aaPredicted RBP5.39□□□□□ -1.55
ZEB1-202ENST00000361642 NUP58Q9BVL2 599 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 DHX33Q9H6R0 707 aaKnown RBP5.39□□□□□ -1.55
ZEB1-202ENST00000361642 CHRNA1P02708 482 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 NTRK1P04629 796 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 MAPK8P45983 427 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 CYP2J2P51589 502 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 STX1AQ16623 288 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 SFR1Q86XK3 245 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 XXYLT1Q8NBI6 393 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 CASD1Q96PB1 797 aa5.39□□□□□ -1.55
ZEB1-202ENST00000361642 CYP3A43Q9HB55 503 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms