RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 EFCAB14O75071 495 aa15.53■□□□□ 0.08
CXCL12-201ENST00000343575 GABBR2O75899 941 aa15.53■□□□□ 0.08
CXCL12-201ENST00000343575 TYMPP19971 482 aa15.53■□□□□ 0.08
CXCL12-201ENST00000343575 RRM1P23921 792 aa15.53■□□□□ 0.08
CXCL12-201ENST00000343575 PPIGQ13427 754 aaKnown RBP eCLIP15.53■□□□□ 0.08
CXCL12-201ENST00000343575 GOLGA7BQ2TAP0 167 aa15.53■□□□□ 0.08
CXCL12-201ENST00000343575 PHLDB2Q86SQ0 1253 aa15.53■□□□□ 0.08
CXCL12-201ENST00000343575 LRRC57Q8N9N7 239 aa15.53■□□□□ 0.08
CXCL12-201ENST00000343575 OR10T2Q8NGX3 314 aa15.53■□□□□ 0.08
CXCL12-201ENST00000343575 TPCN2Q8NHX9 752 aa15.53■□□□□ 0.08
CXCL12-201ENST00000343575 SPATA18Q8TC71 538 aa15.53■□□□□ 0.08
CXCL12-201ENST00000343575 ZNF653Q96CK0 615 aa15.53■□□□□ 0.08
CXCL12-201ENST00000343575 TMEM209Q96SK2 561 aa15.53■□□□□ 0.08
CXCL12-201ENST00000343575 CPXM1Q96SM3 734 aa15.53■□□□□ 0.08
CXCL12-201ENST00000343575 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.53■□□□□ 0.08
CXCL12-201ENST00000343575 TMEM175Q9BSA9 504 aa15.53■□□□□ 0.08
CXCL12-201ENST00000343575 GOLPH3Q9H4A6 298 aa15.53■□□□□ 0.08
CXCL12-201ENST00000343575 RNF216Q9NWF9 866 aaPredicted RBP15.53■□□□□ 0.08
CXCL12-201ENST00000343575 PRKAG2Q9UGJ0 569 aa15.53■□□□□ 0.08
CXCL12-201ENST00000343575 PCDHB8Q9UN66 801 aa15.53■□□□□ 0.08
CXCL12-201ENST00000343575 M0QYV0 167 aa15.52■□□□□ 0.08
CXCL12-201ENST00000343575 FGBP02675 491 aa15.52■□□□□ 0.08
CXCL12-201ENST00000343575 BCAR1P56945 870 aa15.52■□□□□ 0.08
CXCL12-201ENST00000343575 C1QBPQ07021 282 aaKnown RBP15.52■□□□□ 0.08
CXCL12-201ENST00000343575 LRRTM3Q86VH5 581 aa15.52■□□□□ 0.08
CXCL12-201ENST00000343575 SLC2A14Q8TDB8 520 aa15.52■□□□□ 0.08
CXCL12-201ENST00000343575 SLC35F5Q8WV83 523 aa15.52■□□□□ 0.08
CXCL12-201ENST00000343575 VCPIP1Q96JH7 1222 aa15.52■□□□□ 0.08
CXCL12-201ENST00000343575 TNIP3Q96KP6 325 aa15.52■□□□□ 0.08
CXCL12-201ENST00000343575 NOX5Q96PH1 765 aa15.52■□□□□ 0.08
CXCL12-201ENST00000343575 SYT15Q9BQS2 421 aa15.52■□□□□ 0.08
CXCL12-201ENST00000343575 ADAM22Q9P0K1 906 aa15.52■□□□□ 0.08
CXCL12-201ENST00000343575 CNOT8Q9UFF9 292 aaKnown RBP15.52■□□□□ 0.08
CXCL12-201ENST00000343575 FAN1Q9Y2M0 1017 aa15.52■□□□□ 0.08
CXCL12-201ENST00000343575 TARSL2A2RTX5 802 aaKnown RBP15.52■□□□□ 0.07
CXCL12-201ENST00000343575 CLDN5O00501 218 aa15.52■□□□□ 0.07
CXCL12-201ENST00000343575 TADA2AO75478 443 aa15.52■□□□□ 0.07
CXCL12-201ENST00000343575 PALMO75781 387 aa15.52■□□□□ 0.07
CXCL12-201ENST00000343575 OAZ2O95190 189 aa15.52■□□□□ 0.07
CXCL12-201ENST00000343575 HADHBP55084 474 aaKnown RBP15.52■□□□□ 0.07
CXCL12-201ENST00000343575 STILQ15468 1287 aa15.52■□□□□ 0.07
CXCL12-201ENST00000343575 TTC31Q49AM3 519 aaPredicted RBP15.52■□□□□ 0.07
CXCL12-201ENST00000343575 OVOS1Q6IE37 1185 aa15.52■□□□□ 0.07
CXCL12-201ENST00000343575 PMF1Q6P1K2 205 aa15.52■□□□□ 0.07
CXCL12-201ENST00000343575 FAM171BQ6P995 826 aa15.52■□□□□ 0.07
CXCL12-201ENST00000343575 B3GALT6Q96L58 329 aa15.52■□□□□ 0.07
CXCL12-201ENST00000343575 PNKPQ96T60 521 aa15.52■□□□□ 0.07
CXCL12-201ENST00000343575 HNRNPABQ99729 332 aaKnown RBP15.52■□□□□ 0.07
CXCL12-201ENST00000343575 ACBD6Q9BR61 282 aa15.52■□□□□ 0.07
CXCL12-201ENST00000343575 VN1R3Q9BXE9 311 aa15.52■□□□□ 0.07
CXCL12-201ENST00000343575 B3GNT5Q9BYG0 378 aa15.52■□□□□ 0.07
CXCL12-201ENST00000343575 TMEM30AQ9NV96 361 aa15.52■□□□□ 0.07
CXCL12-201ENST00000343575 TMLHEQ9NVH6 421 aa15.52■□□□□ 0.07
CXCL12-201ENST00000343575 ZMYND8Q9ULU4 1186 aaPredicted RBP15.52■□□□□ 0.07
CXCL12-201ENST00000343575 BEST1O76090 585 aa15.51■□□□□ 0.07
CXCL12-201ENST00000343575 MTA2O94776 668 aa15.51■□□□□ 0.07
CXCL12-201ENST00000343575 ADORA2BP29275 332 aa15.51■□□□□ 0.07
CXCL12-201ENST00000343575 CORO7P57737 925 aa15.51■□□□□ 0.07
CXCL12-201ENST00000343575 PDCLQ13371 301 aa15.51■□□□□ 0.07
CXCL12-201ENST00000343575 MRPL58Q14197 206 aaKnown RBP15.51■□□□□ 0.07
CXCL12-201ENST00000343575 MDH1BQ5I0G3 518 aa15.51■□□□□ 0.07
CXCL12-201ENST00000343575 ICE2Q659A1 982 aa15.51■□□□□ 0.07
CXCL12-201ENST00000343575 PLEKHA7Q6IQ23 1121 aa15.51■□□□□ 0.07
CXCL12-201ENST00000343575 TAS1R1Q7RTX1 841 aa15.51■□□□□ 0.07
CXCL12-201ENST00000343575 SLFN11Q7Z7L1 901 aa15.51■□□□□ 0.07
CXCL12-201ENST00000343575 ANKRD52Q8NB46 1076 aa15.51■□□□□ 0.07
CXCL12-201ENST00000343575 TRIM58Q8NG06 486 aa15.51■□□□□ 0.07
CXCL12-201ENST00000343575 PCED1BQ96HM7 432 aa15.51■□□□□ 0.07
CXCL12-201ENST00000343575 ABHD8Q96I13 439 aa15.51■□□□□ 0.07
CXCL12-201ENST00000343575 COLEC11Q9BWP8 271 aa15.51■□□□□ 0.07
CXCL12-201ENST00000343575 TRIM7Q9C029 511 aa15.51■□□□□ 0.07
CXCL12-201ENST00000343575 AVENQ9NQS1 362 aaPredicted RBP15.51■□□□□ 0.07
CXCL12-201ENST00000343575 DSEQ9UL01 958 aa15.51■□□□□ 0.07
CXCL12-201ENST00000343575 CDH9Q9ULB4 789 aa15.51■□□□□ 0.07
CXCL12-201ENST00000343575 ENC1O14682 589 aa15.5■□□□□ 0.07
CXCL12-201ENST00000343575 BUB1BO60566 1050 aaPredicted RBP15.5■□□□□ 0.07
CXCL12-201ENST00000343575 GJB6O95452 261 aa15.5■□□□□ 0.07
CXCL12-201ENST00000343575 CPP00450 1065 aa15.5■□□□□ 0.07
CXCL12-201ENST00000343575 ERBB2P04626 1255 aa15.5■□□□□ 0.07
CXCL12-201ENST00000343575 LINC00271P0C7V0 271 aa15.5■□□□□ 0.07
CXCL12-201ENST00000343575 FGFR3P22607 806 aa15.5■□□□□ 0.07
CXCL12-201ENST00000343575 GABRB2P47870 512 aa15.5■□□□□ 0.07
CXCL12-201ENST00000343575 MAMLD1Q13495 774 aa15.5■□□□□ 0.07
CXCL12-201ENST00000343575 CYP4A22Q5TCH4 519 aa15.5■□□□□ 0.07
CXCL12-201ENST00000343575 FUT10Q6P4F1 479 aa15.5■□□□□ 0.07
CXCL12-201ENST00000343575 ERICH1Q86X53 443 aa15.5■□□□□ 0.07
CXCL12-201ENST00000343575 RHOT2Q8IXI1 618 aa15.5■□□□□ 0.07
CXCL12-201ENST00000343575 MYCBPAPQ8TBZ2 947 aa15.5■□□□□ 0.07
CXCL12-201ENST00000343575 RUBCNQ92622 972 aa15.5■□□□□ 0.07
CXCL12-201ENST00000343575 NUP85Q9BW27 656 aa15.5■□□□□ 0.07
CXCL12-201ENST00000343575 CTTNBP2NLQ9P2B4 639 aa15.5■□□□□ 0.07
CXCL12-201ENST00000343575 LCMT1Q9UIC8 334 aa15.5■□□□□ 0.07
CXCL12-201ENST00000343575 MRPL42Q9Y6G3 142 aaKnown RBP15.5■□□□□ 0.07
CXCL12-201ENST00000343575 SYN3O14994 580 aa15.5■□□□□ 0.07
CXCL12-201ENST00000343575 TRIM66O15016 1216 aa15.5■□□□□ 0.07
CXCL12-201ENST00000343575 ATP1A1P05023 1023 aaKnown RBP15.5■□□□□ 0.07
CXCL12-201ENST00000343575 MYBL1P10243 752 aa15.5■□□□□ 0.07
CXCL12-201ENST00000343575 PCSK1P29120 753 aa15.5■□□□□ 0.07
CXCL12-201ENST00000343575 RPL34P49207 117 aaKnown RBP15.5■□□□□ 0.07
CXCL12-201ENST00000343575 CACNA2D1P54289 1103 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms